Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010753A_C01 KMC010753A_c01
(498 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T14864 probable monosaccharide transport protein Mst-1 - No... 65 5e-12
dbj|BAC43633.1| unknown protein [Arabidopsis thaliana] gi|290288... 59 2e-10
ref|NP_177845.1| sugar carrier protein, putative; protein id: At... 59 2e-10
dbj|BAB19864.1| monosaccharide transporter 3 [Oryza sativa] gi|2... 48 3e-06
emb|CAA05384.1| monosaccharide transporter [Arabidopsis thaliana... 44 1e-05
>pir||T14864 probable monosaccharide transport protein Mst-1 - Norway spruce
gi|2258137|emb|CAB06079.1| PaMst-1 [Picea abies]
Length = 513
Score = 65.1 bits (157), Expect(2) = 5e-12
Identities = 48/103 (46%), Positives = 58/103 (55%), Gaps = 9/103 (8%)
Frame = +2
Query: 152 SG*VTSMDDFLKAF--KLYRRKCMHL*RQTTV---NNQVNNTSTSS----ALVMTFPNSY 304
SG VTSMDDFLK F +Y RK HL R+T +NQ+ TSS LV TF SY
Sbjct: 47 SGGVTSMDDFLKKFFRHVYERKQHHL-RETDYCKYDNQLLTLFTSSLYLSGLVATFGASY 105
Query: 305 LTRKKGRNTIFL*LGALSFLAGVALDPSXKNXXMLILXETCCG 433
+TR KGR + +G LSFL G L+ + KN MLI+ G
Sbjct: 106 ITRSKGRRVSII-IGGLSFLLGAILNAAAKNLGMLIVGRILLG 147
Score = 26.6 bits (57), Expect(2) = 5e-12
Identities = 11/12 (91%), Positives = 12/12 (99%)
Frame = +3
Query: 456 VPLYLTEMAPAK 491
VPLYL+EMAPAK
Sbjct: 157 VPLYLSEMAPAK 168
>dbj|BAC43633.1| unknown protein [Arabidopsis thaliana] gi|29028886|gb|AAO64822.1|
At1g77210 [Arabidopsis thaliana]
Length = 504
Score = 59.3 bits (142), Expect(2) = 2e-10
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Frame = +2
Query: 152 SG*VTSMDDFLKAF--KLYRRKCMHL*R--QTTVNNQVNNTSTSS----ALVMTFPNSYL 307
SG VTSMDDFLK F +Y+RK MHL +NQ+ TSS L+ TF SY+
Sbjct: 47 SGGVTSMDDFLKEFFPGIYKRKQMHLNETDYCKYDNQILTLFTSSLYFAGLISTFGASYV 106
Query: 308 TRKKGRNTIFL*LGALSFLAGVALDPSXKNXXMLILXETCCG 433
TR GR L +G++SF G ++ + KN MLIL G
Sbjct: 107 TRIYGRRGSIL-VGSVSFFLGGVINAAAKNILMLILGRIFLG 147
Score = 26.9 bits (58), Expect(2) = 2e-10
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 450 RVVPLYLTEMAPAK 491
+ VPLYL+EMAPAK
Sbjct: 155 QAVPLYLSEMAPAK 168
>ref|NP_177845.1| sugar carrier protein, putative; protein id: At1g77210.1
[Arabidopsis thaliana] gi|7446743|pir||T00450 probable
monosaccharide transport protein T14N5.7 - Arabidopsis
thaliana gi|3540199|gb|AAC34349.1| Putative
monosaccharide transport protein [Arabidopsis thaliana]
gi|15487250|emb|CAC69070.1| STP14 protein [Arabidopsis
thaliana]
Length = 504
Score = 59.3 bits (142), Expect(2) = 2e-10
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Frame = +2
Query: 152 SG*VTSMDDFLKAF--KLYRRKCMHL*R--QTTVNNQVNNTSTSS----ALVMTFPNSYL 307
SG VTSMDDFLK F +Y+RK MHL +NQ+ TSS L+ TF SY+
Sbjct: 47 SGGVTSMDDFLKEFFPGIYKRKQMHLNETDYCKYDNQILTLFTSSLYFAGLISTFGASYV 106
Query: 308 TRKKGRNTIFL*LGALSFLAGVALDPSXKNXXMLILXETCCG 433
TR GR L +G++SF G ++ + KN MLIL G
Sbjct: 107 TRIYGRRGSIL-VGSVSFFLGGVINAAAKNILMLILGRIFLG 147
Score = 26.9 bits (58), Expect(2) = 2e-10
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 450 RVVPLYLTEMAPAK 491
+ VPLYL+EMAPAK
Sbjct: 155 QAVPLYLSEMAPAK 168
>dbj|BAB19864.1| monosaccharide transporter 3 [Oryza sativa]
gi|22324466|dbj|BAC10381.1| monosaccharide transporter 3
[Oryza sativa (japonica cultivar-group)]
Length = 518
Score = 47.8 bits (112), Expect(2) = 3e-06
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Frame = +2
Query: 143 IYFSG*VTSMDDFLKAF--KLYRRKCM--HL*RQTTVNNQVNNTSTSS----ALVMTFPN 298
I SG VTSMD FL+ F ++YR+K M + +NQ+ T TSS ALV +F
Sbjct: 41 IGISGGVTSMDPFLRKFFPEVYRKKQMADKNNQYCKYDNQLLQTFTSSLYLAALVSSFFA 100
Query: 299 SYLTRKKGRNTIFL*LGALSFLAGVALDPSXKNXXMLILXETCCG 433
+ +TR GR G L+FL G AL+ + +N MLI+ G
Sbjct: 101 ATVTRVLGRKWSMF-AGGLTFLIGAALNGAAENVAMLIVGRILLG 144
Score = 24.3 bits (51), Expect(2) = 3e-06
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3
Query: 456 VPLYLTEMAPAK 491
VP+YL+EMAPA+
Sbjct: 154 VPVYLSEMAPAR 165
>emb|CAA05384.1| monosaccharide transporter [Arabidopsis thaliana]
gi|9758468|dbj|BAB08997.1| monosaccharide transporter
[Arabidopsis thaliana]
Length = 514
Score = 43.5 bits (101), Expect(2) = 1e-05
Identities = 42/108 (38%), Positives = 54/108 (49%), Gaps = 14/108 (12%)
Frame = +2
Query: 152 SG*VTSMDDFLKAF--KLYRRKCMHL*RQTTVNN-------QVNNTSTSS----ALVMTF 292
SG V SM FLK F K+Y+ + R+ NN Q+ + TSS L+ T
Sbjct: 45 SGGVMSMGPFLKRFFPKVYKLQEEDRRRRGNSNNHYCLFNSQLLTSFTSSLYVSGLIATL 104
Query: 293 PNSYLTRKKGRN-TIFL*LGALSFLAGVALDPSXKNXXMLILXETCCG 433
S +TR GR +IFL G +SFLAG AL S +N MLI+ G
Sbjct: 105 LASSVTRSWGRKPSIFL--GGVSFLAGAALGGSAQNVAMLIIARLLLG 150
Score = 26.6 bits (57), Expect(2) = 1e-05
Identities = 11/12 (91%), Positives = 12/12 (99%)
Frame = +3
Query: 456 VPLYLTEMAPAK 491
VPLYL+EMAPAK
Sbjct: 160 VPLYLSEMAPAK 171
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 399,787,557
Number of Sequences: 1393205
Number of extensions: 7635838
Number of successful extensions: 16715
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 16304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16702
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
