Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010708A_C01 KMC010708A_c01
(592 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194594.1| leucine-rich repeat transmembrane protein kinas... 174 1e-42
ref|NP_172335.1| CLAVATA1 receptor kinase( CLV1); protein id: At... 137 1e-31
gb|AAO17351.1| Hypothetical protein [Oryza sativa (japonica cult... 137 1e-31
ref|NP_200956.1| leucine-rich receptor-like protein kinase - lik... 120 2e-26
dbj|BAC06203.1| putative receptor protein kinase [Oryza sativa (... 99 3e-20
>ref|NP_194594.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At4g28650.1 [Arabidopsis thaliana]
gi|7434423|pir||T10659 probable serine/threonine-specific
protein kinase (EC 2.7.1.-) T5F17.100 - Arabidopsis
thaliana gi|7269720|emb|CAB81453.1| receptor protein
kinase-like protein [Arabidopsis thaliana]
Length = 1013
Score = 174 bits (440), Expect = 1e-42
Identities = 91/130 (70%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Frame = -2
Query: 591 DEKIDIYSYGVVLLELLTGKHPLDQEFVESIDIVGWIRSKI-DNKSPEKALDPSVGNCKL 415
DEKIDIYSYGVVLLELLTG+ PL+ EF ES+DIV W+R KI DN S E+ALDP+VGNC+
Sbjct: 884 DEKIDIYSYGVVLLELLTGRRPLEPEFGESVDIVEWVRRKIRDNISLEEALDPNVGNCRY 943
Query: 414 VQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKNSGSNETLAAS--KERLVI 241
VQEEMLLVL+IALLCT KLPKDRPSMRDVI MLGEAKPRRK++ + E + S ++ +
Sbjct: 944 VQEEMLLVLQIALLCTTKLPKDRPSMRDVISMLGEAKPRRKSNSNEENTSRSLAEKHSSV 1003
Query: 240 NTSSPVNGLL 211
++SPVNGLL
Sbjct: 1004 FSTSPVNGLL 1013
>ref|NP_172335.1| CLAVATA1 receptor kinase( CLV1); protein id: At1g08590.1 [Arabidopsis
thaliana] gi|7434430|pir||T00712 protein kinase homolog
F22O13.7 - Arabidopsis thaliana
gi|9802553|gb|AAF99755.1|AC003981_5 F22O13.7 [Arabidopsis
thaliana]
Length = 1029
Score = 137 bits (345), Expect = 1e-31
Identities = 79/129 (61%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Frame = -2
Query: 591 DEKIDIYSYGVVLLELLTGKHPLDQEFVESIDIVGWIRSKID-NKSPEKALDPSV-GNCK 418
DEK DIYS GVVLLEL+TGK P+D F +SID+V WIR K+ N+S E+ +D S+ G+CK
Sbjct: 907 DEKSDIYSLGVVLLELVTGKMPIDPSFEDSIDVVEWIRRKVKKNESLEEVIDASIAGDCK 966
Query: 417 LVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKNSGSNETLAASKERLVIN 238
V EEMLL LRIALLCTAKLPKDRPS+RDVI ML EAKPRRK ++ L I
Sbjct: 967 HVIEEMLLALRIALLCTAKLPKDRPSIRDVITMLAEAKPRRK------SVCQVAGDLPIF 1020
Query: 237 TSSPVNGLL 211
+SPV GL+
Sbjct: 1021 RNSPVVGLI 1029
>gb|AAO17351.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 1030
Score = 137 bits (345), Expect = 1e-31
Identities = 73/129 (56%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Frame = -2
Query: 591 DEKIDIYSYGVVLLELLTGKHPLDQEFVESIDIVGWIRSKI-DNKSPEKALDPSVGN-CK 418
D+K DIYS+GVVL+ELLTG+ P++ E+ ES DIVGWIR ++ N E+ LD SVG
Sbjct: 902 DQKSDIYSFGVVLMELLTGRRPIEPEYGESQDIVGWIRERLRSNTGVEELLDASVGGRVD 961
Query: 417 LVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKNSGSNETLAASKERLVIN 238
V+EEMLLVLR+A+LCTAK PKDRP+MRDV+ MLGEAKPRRK+S + + +
Sbjct: 962 HVREEMLLVLRVAVLCTAKSPKDRPTMRDVVTMLGEAKPRRKSSSATVAATVVDKDKPVF 1021
Query: 237 TSSPVNGLL 211
T+SP +G L
Sbjct: 1022 TTSPDSGYL 1030
>ref|NP_200956.1| leucine-rich receptor-like protein kinase - like protein; protein id:
At5g61480.1 [Arabidopsis thaliana]
Length = 1041
Score = 120 bits (300), Expect = 2e-26
Identities = 60/107 (56%), Positives = 80/107 (74%), Gaps = 2/107 (1%)
Frame = -2
Query: 591 DEKIDIYSYGVVLLELLTGKHPLDQEFVESIDIVGWIRSKIDNKSP-EKALDPSVG-NCK 418
D+K DIYSYGV+LLE++TGK ++ EF E IV W+RSK+ K E+ LD S+G +C
Sbjct: 904 DKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCS 963
Query: 417 LVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKNSGSN 277
L++EEM +LRIALLCT++ P DRP MRDV+++L EAKP+RK G N
Sbjct: 964 LIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQEAKPKRKTVGDN 1010
>dbj|BAC06203.1| putative receptor protein kinase [Oryza sativa (japonica
cultivar-group)] gi|22202670|dbj|BAC07328.1| putative
receptor protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 964
Score = 99.4 bits (246), Expect = 3e-20
Identities = 47/91 (51%), Positives = 65/91 (70%)
Frame = -2
Query: 588 EKIDIYSYGVVLLELLTGKHPLDQEFVESIDIVGWIRSKIDNKSPEKALDPSVGNCKLVQ 409
EK D+YS+G+VLLELLTG+ P DQ+F +DIV W+ S + N++P LDP V +
Sbjct: 857 EKSDVYSFGIVLLELLTGRSPSDQQFDGELDIVSWVSSHLANQNPAAVLDPKVSS--HAS 914
Query: 408 EEMLLVLRIALLCTAKLPKDRPSMRDVIMML 316
E+M VL IA+LCT +LP +RP+MR+V+ ML
Sbjct: 915 EDMTKVLNIAILCTVQLPSERPTMREVVKML 945
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 443,536,837
Number of Sequences: 1393205
Number of extensions: 8466722
Number of successful extensions: 26321
Number of sequences better than 10.0: 1805
Number of HSP's better than 10.0 without gapping: 24441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25286
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
