Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010667A_C01 KMC010667A_c01
(479 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN31916.1| unknown protein [Arabidopsis thaliana] 66 2e-10
ref|NP_197777.1| unknown protein; protein id: At5g23890.1 [Arabi... 66 2e-10
dbj|BAB10538.1| gene_id:K24M7.15~unknown protein [Arabidopsis th... 64 8e-10
dbj|BAB32983.1| P0489A05.3 [Oryza sativa (japonica cultivar-grou... 45 4e-04
ref|NP_198672.1| putative protein; protein id: At5g38560.1, supp... 43 0.002
>gb|AAN31916.1| unknown protein [Arabidopsis thaliana]
Length = 946
Score = 65.9 bits (159), Expect = 2e-10
Identities = 49/129 (37%), Positives = 67/129 (50%), Gaps = 13/129 (10%)
Frame = +3
Query: 102 MASIAPTCSPTSLQLRWAFNGPKFPVAQRLRLPNHLNPRLLRPLRAAAQTGNGSEL---- 269
MAS T +PTSLQLR A + R + P LRP R A ++G G
Sbjct: 1 MASATATWTPTSLQLRLALSS-----GVRRKSP----AVYLRPSRLARKSGYGIVCVSQK 51
Query: 270 --------SGSGSNAADGFSGWSESAEAEQPNTPKKKESY-GGVVGVGVAGILLLTGLTF 422
S S ++AD +GW +S ++ ++ KK+S GVVG GVAGI+L GL++
Sbjct: 52 PEVDAWTGSDSSKSSADNLAGWDDSDNDDKKSSRVKKKSLIEGVVGAGVAGIILFLGLSY 111
Query: 423 AASSLGKRT 449
AA+S KRT
Sbjct: 112 AAASFSKRT 120
>ref|NP_197777.1| unknown protein; protein id: At5g23890.1 [Arabidopsis thaliana]
gi|10176856|dbj|BAB10062.1| gene_id:MRO11.7~unknown
protein [Arabidopsis thaliana]
Length = 946
Score = 65.9 bits (159), Expect = 2e-10
Identities = 49/129 (37%), Positives = 67/129 (50%), Gaps = 13/129 (10%)
Frame = +3
Query: 102 MASIAPTCSPTSLQLRWAFNGPKFPVAQRLRLPNHLNPRLLRPLRAAAQTGNGSEL---- 269
MAS T +PTSLQLR A + R + P LRP R A ++G G
Sbjct: 1 MASATATWTPTSLQLRLALSS-----GVRRKSP----AVYLRPSRLARKSGYGIVCVSQK 51
Query: 270 --------SGSGSNAADGFSGWSESAEAEQPNTPKKKESY-GGVVGVGVAGILLLTGLTF 422
S S ++AD +GW +S ++ ++ KK+S GVVG GVAGI+L GL++
Sbjct: 52 PEVDAWTGSDSSKSSADNLAGWDDSDNDDKKSSRVKKKSLIEGVVGAGVAGIILFLGLSY 111
Query: 423 AASSLGKRT 449
AA+S KRT
Sbjct: 112 AAASFSKRT 120
>dbj|BAB10538.1| gene_id:K24M7.15~unknown protein [Arabidopsis thaliana]
Length = 790
Score = 63.9 bits (154), Expect = 8e-10
Identities = 46/125 (36%), Positives = 67/125 (52%), Gaps = 1/125 (0%)
Frame = +3
Query: 102 MASIAPTCSPTSLQLRWAFNGPKFPVAQRLRLPNHLNPRLLRPLRAAAQTGNGSELSGSG 281
MAS T +P+SLQLR A N F +R ++ +L R LR + N SG
Sbjct: 1 MASTMATWTPSSLQLRIALNHGIFKAPERAKMT-----KLSRRLRISCVAQNAEPGRDSG 55
Query: 282 -SNAADGFSGWSESAEAEQPNTPKKKESYGGVVGVGVAGILLLTGLTFAASSLGKRTASR 458
SN +D F GW++S + E N + + + G + GVAG++L GLT+AA S KR R
Sbjct: 56 ESNGSDRFRGWADSGDDE--NNSRGGDWFKGTLLSGVAGMVLFVGLTYAALS-SKRNVLR 112
Query: 459 PEQQM 473
P+ ++
Sbjct: 113 PKVEV 117
>dbj|BAB32983.1| P0489A05.3 [Oryza sativa (japonica cultivar-group)]
gi|20804530|dbj|BAB92224.1| B1015E06.25 [Oryza sativa
(japonica cultivar-group)]
Length = 404
Score = 45.1 bits (105), Expect = 4e-04
Identities = 32/87 (36%), Positives = 47/87 (53%), Gaps = 5/87 (5%)
Frame = +1
Query: 103 WLPSPPRAPPPLSSSDG-PSMAPNSPLLNACAFPTTSTLASSAHSALLRKPVTALNCLGP 279
WL PP PP S + G P++A S L+A PTT++ S++LR+P L+CL
Sbjct: 194 WLVPPPSPPPRASLAAGVPNIALTSRALSATGTPTTTS------SSILRRP---LHCL-- 242
Query: 280 VLTPPMGSPAGPN----PQKRSSPTPP 348
L PP+ +P P+ P ++ P PP
Sbjct: 243 -LLPPLRAPPSPSLPLLPPLQAPPHPP 268
>ref|NP_198672.1| putative protein; protein id: At5g38560.1, supported by cDNA:
gi_15983496, supported by cDNA: gi_18700152 [Arabidopsis
thaliana] gi|10176824|dbj|BAB10146.1| contains
similarity to protein kinase~gene_id:MBB18.10
[Arabidopsis thaliana]
gi|15983497|gb|AAL11616.1|AF424623_1 AT5g38560/MBB18_10
[Arabidopsis thaliana] gi|18700153|gb|AAL77688.1|
AT5g38560/MBB18_10 [Arabidopsis thaliana]
gi|21360463|gb|AAM47347.1| AT5g38560/MBB18_10
[Arabidopsis thaliana]
Length = 681
Score = 42.7 bits (99), Expect = 0.002
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = +1
Query: 109 PSPPRAPPPLSSSDGPSMAPNSPLLNACAFPTTSTLASSAHSALLRKPVTALNCLGPVLT 288
PSPP++PPP+ SS P +SP ++ P+ + S + P + P T
Sbjct: 42 PSPPQSPPPVVSSSPPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPPPVVIASPPPST 101
Query: 289 PPMGSPA-----GPNPQKRSSPTPP 348
P PA P P +SP+PP
Sbjct: 102 PATTPPAPPQTVSPPPPPDASPSPP 126
Score = 35.0 bits (79), Expect = 0.42
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 157 SMAPNSPLLNACAFPTTSTLASSAHSALLRKPVTALNCLGPVLTPPMGSPAGPNPQKRSS 336
S+ P P+L+ P +S +++A L +P T P +TPP P P P SS
Sbjct: 2 SLVPPLPILS----PPSSNSSTTAPPPLQTQPTTP--SAPPPVTPPPSPPQSPPPVVSSS 55
Query: 337 PTPP 348
P PP
Sbjct: 56 PPPP 59
Score = 34.7 bits (78), Expect = 0.55
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +1
Query: 115 PPRAPPPLSSSDGPSMAPNSPLLNACAFPTTSTLASSAHSALLRKPVTALNCLGP---VL 285
PP PPP P + +SP + P S+ + + P T + P +
Sbjct: 36 PPVTPPPSPPQSPPPVVSSSPPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPPPVVIA 95
Query: 286 TPPMGSPA--GPNPQKRSSPTPP 348
+PP +PA P P + SP PP
Sbjct: 96 SPPPSTPATTPPAPPQTVSPPPP 118
Score = 33.5 bits (75), Expect = 1.2
Identities = 24/87 (27%), Positives = 34/87 (38%), Gaps = 7/87 (8%)
Frame = +1
Query: 109 PSPP---RAPPPLSSSDGPSMAPNS----PLLNACAFPTTSTLASSAHSALLRKPVTALN 267
P PP +PPP + + P P + P +A P T + P +
Sbjct: 88 PPPPVVIASPPPSTPATTPPAPPQTVSPPPPPDASPSPPAPTTTNPPPKPSPSPPGETPS 147
Query: 268 CLGPVLTPPMGSPAGPNPQKRSSPTPP 348
G +PP SP+ P P +SP PP
Sbjct: 148 PPGETPSPPKPSPSTPTPTTTTSPPPP 174
Score = 31.2 bits (69), Expect = 6.1
Identities = 24/86 (27%), Positives = 33/86 (37%), Gaps = 2/86 (2%)
Frame = +1
Query: 97 LQWLPSPPRAPPPLSSSDGPSMAPNSPLLNACAFPTTSTLASSAHSALLRKPVTALNCLG 276
LQ P+ P APPP++ P +P ++SS ++ P
Sbjct: 25 LQTQPTTPSAPPPVTPPPSPPQSP------------PPVVSSSPPPPVVSSPP------- 65
Query: 277 PVLTPPMGSP--AGPNPQKRSSPTPP 348
P +PP P P P SSP PP
Sbjct: 66 PSSSPPPSPPVITSPPPTVASSPPPP 91
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 522,575,599
Number of Sequences: 1393205
Number of extensions: 14987711
Number of successful extensions: 172472
Number of sequences better than 10.0: 1410
Number of HSP's better than 10.0 without gapping: 88338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146168
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13397825772
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
