Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010647A_C01 KMC010647A_c01
(637 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T51861 hypothetical protein [imported] - soybean (fragment)... 135 3e-31
ref|NP_728167.1| CG32548-PB [Drosophila melanogaster] gi|2283249... 41 0.015
ref|NP_573293.1| CG32548-PC [Drosophila melanogaster] gi|7293463... 41 0.015
gb|EAA33812.1| hypothetical protein [Neurospora crassa] 40 0.034
gb|AAN17645.1| corkscrew phosphatase [Drosophila simulans] 39 0.058
>pir||T51861 hypothetical protein [imported] - soybean (fragment)
gi|3832528|gb|AAC70787.1| unknown [Glycine max]
Length = 426
Score = 135 bits (341), Expect = 3e-31
Identities = 76/126 (60%), Positives = 92/126 (72%), Gaps = 2/126 (1%)
Frame = -3
Query: 626 EQVHQLMQ-MSNNHGGAQPPSRGGPIANGNMVKNGPGFVGQTPPIPGGGSGNVHGNNGAV 450
+ +HQL+Q MSNN+GG QP S GGP AN M KN GF G P + GGS NV GNNG +
Sbjct: 303 QMIHQLLQEMSNNNGGVQPQSLGGPSAN--MAKNALGFGGHYPSL-SGGSANVTGNNGPM 359
Query: 449 SRSHSFKAASSSDSYAAGGNNGFNQRTSDIIQHRHQQQEQDVVQNITHEFTDD-FFNSDL 273
SR++SFK ++SDS AAGGNNG NQRTS++ Q+ H QDVVQ+I +EFTD+ F NSDL
Sbjct: 360 SRNNSFKTTANSDSSAAGGNNGLNQRTSEMPQNLHL---QDVVQDIGNEFTDNPFLNSDL 416
Query: 272 DDNMAF 255
DDNM F
Sbjct: 417 DDNMGF 422
>ref|NP_728167.1| CG32548-PB [Drosophila melanogaster] gi|22832498|gb|AAF48841.2|
CG32548-PB [Drosophila melanogaster]
Length = 385
Score = 40.8 bits (94), Expect = 0.015
Identities = 36/106 (33%), Positives = 50/106 (46%), Gaps = 4/106 (3%)
Frame = -3
Query: 605 QMSNNHGGAQPPSRGGPIANGNMVKNGPGFVGQTPPIPGGGSGNVHGNNGAVSRSHSFKA 426
Q SNN G QP +A+G++V GP G IPGG G+ A RS+S
Sbjct: 255 QFSNN--GLQPER----LASGSIVPGGPVRGGPVGVIPGGVIGS------APLRSNSLGG 302
Query: 425 ASSSDSYAAGGNNGFNQRTSDIIQHRHQQQEQDVV----QNITHEF 300
+S D Y+ + GF QQQ+QDV+ Q++ H+F
Sbjct: 303 GASGDFYSTQQHMGF-----------MQQQQQDVLRDQQQSVAHQF 337
>ref|NP_573293.1| CG32548-PC [Drosophila melanogaster] gi|7293463|gb|AAF48839.1|
CG32548-PC [Drosophila melanogaster]
gi|17861566|gb|AAL39260.1| GH12946p [Drosophila
melanogaster]
Length = 354
Score = 40.8 bits (94), Expect = 0.015
Identities = 36/106 (33%), Positives = 50/106 (46%), Gaps = 4/106 (3%)
Frame = -3
Query: 605 QMSNNHGGAQPPSRGGPIANGNMVKNGPGFVGQTPPIPGGGSGNVHGNNGAVSRSHSFKA 426
Q SNN G QP +A+G++V GP G IPGG G+ A RS+S
Sbjct: 224 QFSNN--GLQPER----LASGSIVPGGPVRGGPVGVIPGGVIGS------APLRSNSLGG 271
Query: 425 ASSSDSYAAGGNNGFNQRTSDIIQHRHQQQEQDVV----QNITHEF 300
+S D Y+ + GF QQQ+QDV+ Q++ H+F
Sbjct: 272 GASGDFYSTQQHMGF-----------MQQQQQDVLRDQQQSVAHQF 306
>gb|EAA33812.1| hypothetical protein [Neurospora crassa]
Length = 477
Score = 39.7 bits (91), Expect = 0.034
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Frame = -3
Query: 599 SNNHGGAQPPSRGGPIANGNMVKNGPGFVGQTPPIPGGGSGNVHGNNGAVSRSHSFKAAS 420
S GG+ ++ G + + PG +PGGGSG+V G +G+ S +++
Sbjct: 353 SGTKGGSASATKAGGSKGTSAPNSIPGAGAAPNQVPGGGSGSVSGGSGSSSSGSDGGSSA 412
Query: 419 SSDS-------YAAGGNNGFNQRTSD 363
DS +A G NGF+Q D
Sbjct: 413 GGDSGSGASSGSSACGMNGFSQSCDD 438
>gb|AAN17645.1| corkscrew phosphatase [Drosophila simulans]
Length = 555
Score = 38.9 bits (89), Expect = 0.058
Identities = 28/93 (30%), Positives = 41/93 (43%)
Frame = -3
Query: 608 MQMSNNHGGAQPPSRGGPIANGNMVKNGPGFVGQTPPIPGGGSGNVHGNNGAVSRSHSFK 429
M + N H Q P P+ N N NG +G + GGGS N +NG S + +
Sbjct: 429 MGVGNKHASKQQPPL--PVVNCNNNNNG---IGNSSCSNGGGSSNTSSSNG--SSNGNIN 481
Query: 428 AASSSDSYAAGGNNGFNQRTSDIIQHRHQQQEQ 330
A GGN + SD ++ + Q++EQ
Sbjct: 482 ALLGGIGLGLGGNMRKSNFYSDSLKQQQQREEQ 514
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 613,997,954
Number of Sequences: 1393205
Number of extensions: 15168621
Number of successful extensions: 60349
Number of sequences better than 10.0: 311
Number of HSP's better than 10.0 without gapping: 48582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57950
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26439068301
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
