Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010625A_C01 KMC010625A_c01
(541 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193760.1| leucine-rich repeat transmembrane protein kinas... 165 4e-40
gb|AAF91322.1|AF244888_1 receptor-like protein kinase 1 [Glycine... 137 8e-32
gb|AAF91324.1|AF244890_1 receptor-like protein kinase 3 [Glycine... 137 1e-31
gb|AAF91323.1|AF244889_1 receptor-like protein kinase 2 [Glycine... 137 1e-31
gb|AAO26313.1| receptor-like protein kinase [Elaeis guineensis] 134 9e-31
>ref|NP_193760.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At4g20270.1 [Arabidopsis thaliana]
gi|7434425|pir||T05335 hypothetical protein F1C12.190 -
Arabidopsis thaliana gi|2982444|emb|CAA18252.1| CLV1
receptor kinase like protein [Arabidopsis thaliana]
gi|7268822|emb|CAB79027.1| CLV1 receptor kinase like
protein [Arabidopsis thaliana]
Length = 992
Score = 165 bits (417), Expect = 4e-40
Identities = 78/106 (73%), Positives = 97/106 (90%)
Frame = -3
Query: 539 YTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGLNIVQWSQVQTDWNQERVVKILDGR 360
YTL++DEKSDVYSFGVVLLEL+TGR+PV +FGEEG++IVQWS++QT+ N++ VVKI+D R
Sbjct: 887 YTLRIDEKSDVYSFGVVLLELITGRKPVDNFGEEGIDIVQWSKIQTNCNRQGVVKIIDQR 946
Query: 359 LCHIPLEEAKQVFFVAMLCVQEPSVERPNMREVVEMLAQAKQPNTF 222
L +IPL EA ++FFVAMLCVQE SVERP MREVV+M++QAKQPNTF
Sbjct: 947 LSNIPLAEAMELFFVAMLCVQEHSVERPTMREVVQMISQAKQPNTF 992
>gb|AAF91322.1|AF244888_1 receptor-like protein kinase 1 [Glycine max]
Length = 1008
Score = 137 bits (345), Expect = 8e-32
Identities = 67/103 (65%), Positives = 85/103 (82%)
Frame = -3
Query: 539 YTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGLNIVQWSQVQTDWNQERVVKILDGR 360
YTLKVDEKSDVYSFGVVLLEL+TGR+PVG+FG+ G++IVQW + TD N+E V+K+LD R
Sbjct: 862 YTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGD-GVDIVQWVRKMTDSNKEGVLKVLDSR 920
Query: 359 LCHIPLEEAKQVFFVAMLCVQEPSVERPNMREVVEMLAQAKQP 231
L +PL E VF+VAMLCV+E +VERP MREVV++L + +P
Sbjct: 921 LPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKP 963
>gb|AAF91324.1|AF244890_1 receptor-like protein kinase 3 [Glycine max]
Length = 1012
Score = 137 bits (344), Expect = 1e-31
Identities = 67/103 (65%), Positives = 85/103 (82%)
Frame = -3
Query: 539 YTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGLNIVQWSQVQTDWNQERVVKILDGR 360
YTLKVDEKSDVYSFGVVLLEL+TGR+PVG+FG+ G++IVQW + TD N+E V+K+LD R
Sbjct: 866 YTLKVDEKSDVYSFGVVLLELITGRKPVGEFGD-GVDIVQWVRKMTDSNKEGVLKVLDPR 924
Query: 359 LCHIPLEEAKQVFFVAMLCVQEPSVERPNMREVVEMLAQAKQP 231
L +PL E VF+VAMLCV+E +VERP MREVV++L + +P
Sbjct: 925 LPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKP 967
>gb|AAF91323.1|AF244889_1 receptor-like protein kinase 2 [Glycine max]
Length = 1012
Score = 137 bits (344), Expect = 1e-31
Identities = 67/103 (65%), Positives = 85/103 (82%)
Frame = -3
Query: 539 YTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGLNIVQWSQVQTDWNQERVVKILDGR 360
YTLKVDEKSDVYSFGVVLLEL+TGR+PVG+FG+ G++IVQW + TD N+E V+K+LD R
Sbjct: 866 YTLKVDEKSDVYSFGVVLLELITGRKPVGEFGD-GVDIVQWVRKMTDSNKEGVLKVLDPR 924
Query: 359 LCHIPLEEAKQVFFVAMLCVQEPSVERPNMREVVEMLAQAKQP 231
L +PL E VF+VAMLCV+E +VERP MREVV++L + +P
Sbjct: 925 LPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKP 967
>gb|AAO26313.1| receptor-like protein kinase [Elaeis guineensis]
Length = 481
Score = 134 bits (336), Expect = 9e-31
Identities = 66/98 (67%), Positives = 83/98 (84%)
Frame = -3
Query: 536 TLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGLNIVQWSQVQTDWNQERVVKILDGRL 357
TLKVDEKSDVYSFGVVLLEL+TGR+PVG+FG+ G++IVQW + TD N+E ++KI+D RL
Sbjct: 342 TLKVDEKSDVYSFGVVLLELVTGRKPVGEFGD-GVDIVQWVRKVTDTNKEGILKIIDPRL 400
Query: 356 CHIPLEEAKQVFFVAMLCVQEPSVERPNMREVVEMLAQ 243
+PL EA VF+VAMLCV+E SVERP MREVV++L +
Sbjct: 401 SSVPLHEAMHVFYVAMLCVEEQSVERPTMREVVQILTE 438
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 515,808,097
Number of Sequences: 1393205
Number of extensions: 12156900
Number of successful extensions: 45337
Number of sequences better than 10.0: 2148
Number of HSP's better than 10.0 without gapping: 42179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43989
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
