Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010622A_C01 KMC010622A_c01
(559 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200514.1| putative protein; protein id: At5g57040.1, supp... 141 6e-33
dbj|BAC15946.1| OJ1714_H10.23 [Oryza sativa (japonica cultivar-g... 135 3e-31
ref|NP_682488.1| ORF_ID:tll1698~hypothetical protein [Thermosyne... 46 4e-04
gb|ZP_00109230.1| hypothetical protein [Nostoc punctiforme] 44 0.002
ref|NP_486114.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2... 44 0.002
>ref|NP_200514.1| putative protein; protein id: At5g57040.1, supported by cDNA: 7233.
[Arabidopsis thaliana] gi|8777444|dbj|BAA97034.1|
gb|AAD55473.1~gene_id:MHM17.18~similar to unknown
protein [Arabidopsis thaliana]
gi|21594695|gb|AAM66034.1| unknown [Arabidopsis
thaliana]
Length = 197
Score = 141 bits (355), Expect = 6e-33
Identities = 65/73 (89%), Positives = 70/73 (95%)
Frame = -3
Query: 557 EMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYTLSRSGRPAIFT 378
EMIHLMELPNPDPLTGRP+HGGRDRH CIAIRDVS LK ILDKAGI+YT+S+SGRPAIFT
Sbjct: 125 EMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFT 184
Query: 377 RDPDANALEFTQI 339
RDPDANALEFTQ+
Sbjct: 185 RDPDANALEFTQV 197
>dbj|BAC15946.1| OJ1714_H10.23 [Oryza sativa (japonica cultivar-group)]
Length = 208
Score = 135 bits (341), Expect = 3e-31
Identities = 62/73 (84%), Positives = 67/73 (90%)
Frame = -3
Query: 557 EMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYTLSRSGRPAIFT 378
EMIHLMELPNPDPLTGRP+HGGRDRHTC+AI+DV KLK I DKAGI YTLS+SGRPAIF
Sbjct: 136 EMIHLMELPNPDPLTGRPEHGGRDRHTCMAIKDVLKLKEIFDKAGIKYTLSKSGRPAIFA 195
Query: 377 RDPDANALEFTQI 339
RDPD NALEFTQ+
Sbjct: 196 RDPDGNALEFTQV 208
>ref|NP_682488.1| ORF_ID:tll1698~hypothetical protein [Thermosynechococcus elongatus
BP-1] gi|22295423|dbj|BAC09250.1|
ORF_ID:tll1698~hypothetical protein [Thermosynechococcus
elongatus BP-1]
Length = 117
Score = 45.8 bits (107), Expect = 4e-04
Identities = 23/59 (38%), Positives = 34/59 (56%)
Frame = -3
Query: 515 TGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYTLSRSGRPAIFTRDPDANALEFTQI 339
T + Q GR+ H + + D++ L+ L A I + S SGR AIF DPD N +E +Q+
Sbjct: 58 TCQDQRWGRNPHFALGVTDLASLEQRLVAAQIPWQRSASGRAAIFVADPDGNLIELSQL 116
>gb|ZP_00109230.1| hypothetical protein [Nostoc punctiforme]
Length = 119
Score = 43.5 bits (101), Expect = 0.002
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = -3
Query: 551 IHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYTLSRSGRPAIFTRD 372
IHL+ P P + GR+ H ++ D+ K S SGRPA+FT+D
Sbjct: 50 IHLIVAPTV-PTENPNEKWGRNPHVAFSVTDLDAAKEQFLNHNYPIQPSASGRPALFTQD 108
Query: 371 PDANALEFTQ 342
PD N +E +Q
Sbjct: 109 PDGNIIELSQ 118
>ref|NP_486114.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25531459|pir||AD2065
hypothetical protein alr2074 [imported] - Nostoc sp.
(strain PCC 7120) gi|17131165|dbj|BAB73773.1|
ORF_ID:alr2074~hypothetical protein [Nostoc sp. PCC
7120]
Length = 136
Score = 43.5 bits (101), Expect = 0.002
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = -3
Query: 551 IHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYTLSRSGRPAIFTRD 372
IHL+ + + P + GR+ H ++ D+ K L S SGRPA+FT+D
Sbjct: 67 IHLI-VASDVPTDNPNEKWGRNPHIAFSVADLEAAKQELINKNYPIQPSASGRPALFTQD 125
Query: 371 PDANALEFTQ 342
PD N +E +Q
Sbjct: 126 PDGNIIELSQ 135
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 445,229,560
Number of Sequences: 1393205
Number of extensions: 8745444
Number of successful extensions: 20663
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20662
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
