Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010562A_C01 KMC010562A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD41396.1| OJ000223_09.8 [Oryza sativa (japonica cultivar-g... 39 0.038
gb|AAL79959.1| glucose-6-phosphate dehydrogenase [Oryza sativa] 39 0.038
dbj|BAA97663.1| glucose-6-phosphate dehydrogenase [Triticum aest... 39 0.050
dbj|BAA97662.1| glucose-6-phosphate dehydrogenase [Triticum aest... 39 0.050
dbj|BAA97664.1| glucose-6-phosphate dehydrogenase [Triticum aest... 39 0.050
>emb|CAD41396.1| OJ000223_09.8 [Oryza sativa (japonica cultivar-group)]
Length = 506
Score = 38.9 bits (89), Expect = 0.038
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -1
Query: 494 LVVRFAN*LFLLLWNRDNIDHV 429
LV+RFAN LFL LWNRDNID++
Sbjct: 212 LVLRFANRLFLPLWNRDNIDNI 233
>gb|AAL79959.1| glucose-6-phosphate dehydrogenase [Oryza sativa]
Length = 505
Score = 38.9 bits (89), Expect = 0.038
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -1
Query: 494 LVVRFAN*LFLLLWNRDNIDHV 429
LV+RFAN LFL LWNRDNID++
Sbjct: 212 LVLRFANRLFLPLWNRDNIDNI 233
>dbj|BAA97663.1| glucose-6-phosphate dehydrogenase [Triticum aestivum]
Length = 513
Score = 38.5 bits (88), Expect = 0.050
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -1
Query: 494 LVVRFAN*LFLLLWNRDNIDHV 429
LV+RFAN LFL LWNRDN+D++
Sbjct: 216 LVLRFANRLFLPLWNRDNVDNI 237
>dbj|BAA97662.1| glucose-6-phosphate dehydrogenase [Triticum aestivum]
Length = 509
Score = 38.5 bits (88), Expect = 0.050
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -1
Query: 494 LVVRFAN*LFLLLWNRDNIDHV 429
LV+RFAN LFL LWNRDN+D++
Sbjct: 216 LVLRFANRLFLPLWNRDNVDNI 237
>dbj|BAA97664.1| glucose-6-phosphate dehydrogenase [Triticum aestivum]
Length = 509
Score = 38.5 bits (88), Expect = 0.050
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -1
Query: 494 LVVRFAN*LFLLLWNRDNIDHV 429
LV+RFAN LFL LWNRDN+D++
Sbjct: 216 LVLRFANRLFLPLWNRDNVDNI 237
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 436,147,532
Number of Sequences: 1393205
Number of extensions: 9095475
Number of successful extensions: 25314
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 24436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25237
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
