Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010545A_C01 KMC010545A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P35493|PMGI_RICCO 2,3-bisphosphoglycerate-independent phospho... 277 6e-74
sp|Q42908|PMGI_MESCR 2,3-bisphosphoglycerate-independent phospho... 276 1e-73
sp|P35494|PMGI_TOBAC 2,3-bisphosphoglycerate-independent phospho... 273 9e-73
pir||S44373 phosphoglycerate mutase (EC 5.4.2.1), 2, 3-bisphosph... 273 9e-73
sp|P30792|PMGI_MAIZE 2,3-bisphosphoglycerate-independent phospho... 271 4e-72
>sp|P35493|PMGI_RICCO 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
(Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)
gi|1076562|pir||S49647 phosphoglycerate mutase (EC
5.4.2.1), 2, 3-bisphosphoglycerate-independent - castor
bean gi|474170|emb|CAA49995.1| phosphoglycerate mutase
[Ricinus communis]
Length = 556
Score = 277 bits (708), Expect = 6e-74
Identities = 129/150 (86%), Positives = 138/150 (92%)
Frame = +2
Query: 77 WKLNDHPKLPKGKQIAMVVLDGWGEAKPNEYNCIHTAETPTMDSLKNGAPERWRLVKAHG 256
WKL DHPKLPKGK IAMVVLDGWGEAKP++YNCIH AETPTMDS K APERWRL+KAHG
Sbjct: 5 WKLADHPKLPKGKTIAMVVLDGWGEAKPDQYNCIHVAETPTMDSFKKTAPERWRLIKAHG 64
Query: 257 KAVGLPTDDDMGNSEVGHNALGAGRIYAQGAKLVDIALESGSIYEGEGFKYIKECFETGT 436
AVGLPT+DDMGNSEVGHNALGAGRIYAQGAKLVD+AL SG IYEGEGFKY+KECF+ GT
Sbjct: 65 TAVGLPTEDDMGNSEVGHNALGAGRIYAQGAKLVDLALASGKIYEGEGFKYVKECFDKGT 124
Query: 437 LHLLGLLSDGGVHSRLDQLQLLLKGVSERG 526
LHL+GLLSDGGVHSRLDQLQLLLKG +E G
Sbjct: 125 LHLIGLLSDGGVHSRLDQLQLLLKGAAEHG 154
>sp|Q42908|PMGI_MESCR 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
(Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)
gi|2118335|pir||S60473 phosphoglycerate mutase (EC
5.4.2.1), 2, 3-bisphosphoglycerate-independent - common
ice plant gi|602426|gb|AAA86979.1| phosphoglyceromutase
Length = 559
Score = 276 bits (706), Expect = 1e-73
Identities = 132/157 (84%), Positives = 142/157 (90%), Gaps = 3/157 (1%)
Frame = +2
Query: 65 MGS---QWKLNDHPKLPKGKQIAMVVLDGWGEAKPNEYNCIHTAETPTMDSLKNGAPERW 235
MGS WKL DHPKLPKGK +AMVVLDGWGEA N+YNCIH AETPTMDSLK GAPE+W
Sbjct: 1 MGSTEFSWKLADHPKLPKGKTLAMVVLDGWGEASANQYNCIHVAETPTMDSLKQGAPEKW 60
Query: 236 RLVKAHGKAVGLPTDDDMGNSEVGHNALGAGRIYAQGAKLVDIALESGSIYEGEGFKYIK 415
RL++AHGKAVGLPT+DDMGNSEVGHNALGAGRIYAQGAKLVD+ALESG IY+GEGF YIK
Sbjct: 61 RLIRAHGKAVGLPTEDDMGNSEVGHNALGAGRIYAQGAKLVDLALESGKIYDGEGFNYIK 120
Query: 416 ECFETGTLHLLGLLSDGGVHSRLDQLQLLLKGVSERG 526
E FET TLHL+GLLSDGGVHSRLDQLQLLLKG +ERG
Sbjct: 121 ESFETNTLHLIGLLSDGGVHSRLDQLQLLLKGSAERG 157
>sp|P35494|PMGI_TOBAC 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
(Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)
gi|474168|emb|CAA49994.1| phosphoglycerate mutase
[Nicotiana tabacum]
Length = 559
Score = 273 bits (698), Expect = 9e-73
Identities = 125/153 (81%), Positives = 139/153 (90%)
Frame = +2
Query: 68 GSQWKLNDHPKLPKGKQIAMVVLDGWGEAKPNEYNCIHTAETPTMDSLKNGAPERWRLVK 247
G WKL DHPKLPKGK +A++VLDGWGEAKPNE+N IH AETP M SLKNGAPE+WRL+K
Sbjct: 5 GDAWKLKDHPKLPKGKTVAVIVLDGWGEAKPNEFNAIHVAETPVMYSLKNGAPEKWRLIK 64
Query: 248 AHGKAVGLPTDDDMGNSEVGHNALGAGRIYAQGAKLVDIALESGSIYEGEGFKYIKECFE 427
AHG AVGLPT+DDMGNSEVGHNALGAGRI+AQGAKLVD+AL SG IYEGEGFKY+KECFE
Sbjct: 65 AHGNAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYEGEGFKYVKECFE 124
Query: 428 TGTLHLLGLLSDGGVHSRLDQLQLLLKGVSERG 526
GTLHL+GLLSDGGVHSRLDQ+QLLLKG ++ G
Sbjct: 125 KGTLHLIGLLSDGGVHSRLDQVQLLLKGAAKHG 157
>pir||S44373 phosphoglycerate mutase (EC 5.4.2.1), 2,
3-bisphosphoglycerate-independent - common tobacco
Length = 559
Score = 273 bits (698), Expect = 9e-73
Identities = 125/153 (81%), Positives = 139/153 (90%)
Frame = +2
Query: 68 GSQWKLNDHPKLPKGKQIAMVVLDGWGEAKPNEYNCIHTAETPTMDSLKNGAPERWRLVK 247
G WKL DHPKLPKGK +A++VLDGWGEAKPNE+N IH AETP M SLKNGAPE+WRL+K
Sbjct: 5 GDAWKLKDHPKLPKGKTVAVIVLDGWGEAKPNEFNAIHVAETPVMYSLKNGAPEKWRLIK 64
Query: 248 AHGKAVGLPTDDDMGNSEVGHNALGAGRIYAQGAKLVDIALESGSIYEGEGFKYIKECFE 427
AHG AVGLPT+DDMGNSEVGHNALGAGRI+AQGAKLVD+AL SG IYEGEGFKY+KECFE
Sbjct: 65 AHGNAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYEGEGFKYVKECFE 124
Query: 428 TGTLHLLGLLSDGGVHSRLDQLQLLLKGVSERG 526
GTLHL+GLLSDGGVHSRLDQ+QLLLKG ++ G
Sbjct: 125 KGTLHLIGLLSDGGVHSRLDQVQLLLKGAAKHG 157
>sp|P30792|PMGI_MAIZE 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
(Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)
gi|283033|pir||A42807 phosphoglycerate mutase (EC
5.4.2.1), 2, 3-bisphosphoglycerate-independent - maize
gi|168588|gb|AAA33499.1|
2,3-bisphosphoglycerate-independent phosphoglycerate
mutase
Length = 559
Score = 271 bits (693), Expect = 4e-72
Identities = 127/153 (83%), Positives = 139/153 (90%)
Frame = +2
Query: 68 GSQWKLNDHPKLPKGKQIAMVVLDGWGEAKPNEYNCIHTAETPTMDSLKNGAPERWRLVK 247
G W L DHPKLPKGK +A+VVLDGWGEA P++YNCIH A+TP MDSLKNGAPE+WRLVK
Sbjct: 5 GFSWTLPDHPKLPKGKSVAVVVLDGWGEANPDQYNCIHVAQTPVMDSLKNGAPEKWRLVK 64
Query: 248 AHGKAVGLPTDDDMGNSEVGHNALGAGRIYAQGAKLVDIALESGSIYEGEGFKYIKECFE 427
AHG AVGLP+DDDMGNSEVGHNALGAGRI+AQGAKLVD AL SG IY+G+GF YIKE FE
Sbjct: 65 AHGTAVGLPSDDDMGNSEVGHNALGAGRIFAQGAKLVDQALASGKIYDGDGFNYIKESFE 124
Query: 428 TGTLHLLGLLSDGGVHSRLDQLQLLLKGVSERG 526
+GTLHL+GLLSDGGVHSRLDQLQLLLKGVSERG
Sbjct: 125 SGTLHLIGLLSDGGVHSRLDQLQLLLKGVSERG 157
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 500,365,532
Number of Sequences: 1393205
Number of extensions: 11817032
Number of successful extensions: 33230
Number of sequences better than 10.0: 140
Number of HSP's better than 10.0 without gapping: 31680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32993
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
