Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010533A_C01 KMC010533A_c01
(558 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B84773 probable mitochondrial carrier protein [imported] - ... 116 2e-25
ref|NP_181124.2| putative mitochondrial carrier protein; protein... 116 2e-25
ref|NP_180204.1| putative mitochondrial carrier protein; protein... 97 1e-19
dbj|BAC41912.1| putative mitochondrial carrier protein [Arabidop... 97 1e-19
ref|NP_594641.1| agpet8 protein. [Schizosaccharomyces pombe] gi|... 60 2e-08
>pir||B84773 probable mitochondrial carrier protein [imported] - Arabidopsis
thaliana gi|4510389|gb|AAD21477.1| putative
mitochondrial carrier protein [Arabidopsis thaliana]
Length = 844
Score = 116 bits (291), Expect = 2e-25
Identities = 56/78 (71%), Positives = 69/78 (87%), Gaps = 1/78 (1%)
Frame = -3
Query: 556 GLASVTTTPFDVIKTRMMT-TQGQSVSMTIVALSILHHEGPLGLFKGAVPRFFSIAPLGA 380
G+A+V TTPFDV+KTRMMT T G+ +SM++V +SIL +EGPLGLFKGAVPRFF +APLGA
Sbjct: 754 GIAAVVTTPFDVMKTRMMTATPGRPISMSMVVVSILRNEGPLGLFKGAVPRFFWVAPLGA 813
Query: 379 MNFAGYELVRKALNKNEE 326
MNFAGYEL +KA+ KNE+
Sbjct: 814 MNFAGYELAKKAMQKNED 831
>ref|NP_181124.2| putative mitochondrial carrier protein; protein id: At2g35800.1,
supported by cDNA: gi_17380983, supported by cDNA:
gi_20466022 [Arabidopsis thaliana]
gi|17380984|gb|AAL36304.1| putative mitochondrial
carrier protein [Arabidopsis thaliana]
gi|20466023|gb|AAM20346.1| putative mitochondrial
carrier protein [Arabidopsis thaliana]
Length = 823
Score = 116 bits (291), Expect = 2e-25
Identities = 56/78 (71%), Positives = 69/78 (87%), Gaps = 1/78 (1%)
Frame = -3
Query: 556 GLASVTTTPFDVIKTRMMT-TQGQSVSMTIVALSILHHEGPLGLFKGAVPRFFSIAPLGA 380
G+A+V TTPFDV+KTRMMT T G+ +SM++V +SIL +EGPLGLFKGAVPRFF +APLGA
Sbjct: 733 GIAAVVTTPFDVMKTRMMTATPGRPISMSMVVVSILRNEGPLGLFKGAVPRFFWVAPLGA 792
Query: 379 MNFAGYELVRKALNKNEE 326
MNFAGYEL +KA+ KNE+
Sbjct: 793 MNFAGYELAKKAMQKNED 810
>ref|NP_180204.1| putative mitochondrial carrier protein; protein id: At2g26360.1
[Arabidopsis thaliana] gi|7488007|pir||T00969 probable
mitochondrial carrier protein At2g26360 [imported] -
Arabidopsis thaliana gi|2739362|gb|AAC14487.1| putative
mitochondrial carrier protein [Arabidopsis thaliana]
Length = 303
Score = 97.4 bits (241), Expect = 1e-19
Identities = 49/73 (67%), Positives = 57/73 (77%), Gaps = 1/73 (1%)
Frame = -3
Query: 556 GLASVTTTPFDVIKTRMMTT-QGQSVSMTIVALSILHHEGPLGLFKGAVPRFFSIAPLGA 380
G +V TTPFDVIKTRMMT QG +SM + A SIL HEGPL +KGAVPRFF APLGA
Sbjct: 220 GFTAVLTTPFDVIKTRMMTAPQGVELSMLMAAYSILTHEGPLAFYKGAVPRFFWTAPLGA 279
Query: 379 MNFAGYELVRKAL 341
+N AGYEL++KA+
Sbjct: 280 LNLAGYELLQKAM 292
>dbj|BAC41912.1| putative mitochondrial carrier protein [Arabidopsis thaliana]
gi|28950939|gb|AAO63393.1| At2g26360 [Arabidopsis
thaliana]
Length = 369
Score = 97.4 bits (241), Expect = 1e-19
Identities = 49/73 (67%), Positives = 57/73 (77%), Gaps = 1/73 (1%)
Frame = -3
Query: 556 GLASVTTTPFDVIKTRMMTT-QGQSVSMTIVALSILHHEGPLGLFKGAVPRFFSIAPLGA 380
G +V TTPFDVIKTRMMT QG +SM + A SIL HEGPL +KGAVPRFF APLGA
Sbjct: 286 GFTAVLTTPFDVIKTRMMTAPQGVELSMLMAAYSILTHEGPLAFYKGAVPRFFWTAPLGA 345
Query: 379 MNFAGYELVRKAL 341
+N AGYEL++KA+
Sbjct: 346 LNLAGYELLQKAM 358
>ref|NP_594641.1| agpet8 protein. [Schizosaccharomyces pombe]
gi|1723552|sp|Q10442|YDE9_SCHPO Putative mitochondrial
carrier C12B10.09 gi|7492730|pir||T37576 probable
mitochondrial carrier protein - fission yeast
(Schizosaccharomyces pombe) gi|1262422|emb|CAA94699.1|
agpet8 protein. [Schizosaccharomyces pombe]
Length = 345
Score = 59.7 bits (143), Expect = 2e-08
Identities = 31/68 (45%), Positives = 45/68 (65%)
Frame = -3
Query: 556 GLASVTTTPFDVIKTRMMTTQGQSVSMTIVALSILHHEGPLGLFKGAVPRFFSIAPLGAM 377
G+A+ TTPFDV+KTR+MT+Q Q +S SI+ HEG L L+KG VPR ++ GA+
Sbjct: 270 GIAAALTTPFDVVKTRIMTSQ-QRLSYVFTIKSIVAHEGFLALYKGIVPRVLWLSGGGAI 328
Query: 376 NFAGYELV 353
Y+++
Sbjct: 329 FLGCYDVI 336
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 462,743,063
Number of Sequences: 1393205
Number of extensions: 9569093
Number of successful extensions: 20108
Number of sequences better than 10.0: 563
Number of HSP's better than 10.0 without gapping: 19013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19810
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
