Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010515A_C01 KMC010515A_c01
(485 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177122.2| acid phosphatase, putative; protein id: At1g696... 131 5e-30
pir||B96718 probable sterol desaturase T6C23.16 [imported] - Ara... 131 5e-30
ref|NP_563944.1| acid phosphatase, putative; protein id: At1g142... 128 3e-29
pir||A86277 F14L17.5 protein - Arabidopsis thaliana gi|7262670|g... 128 3e-29
dbj|BAA82130.1| acid phosphatase [Lupinus albus] 107 7e-23
>ref|NP_177122.2| acid phosphatase, putative; protein id: At1g69640.1, supported by
cDNA: gi_17979534 [Arabidopsis thaliana]
gi|17979535|gb|AAL50102.1| At1g69640/F24J1.22
[Arabidopsis thaliana] gi|23505995|gb|AAN28857.1|
At1g69640/F24J1.22 [Arabidopsis thaliana]
Length = 260
Score = 131 bits (329), Expect = 5e-30
Identities = 68/102 (66%), Positives = 81/102 (78%)
Frame = +2
Query: 179 MDLGISDELLGTFAPILVYWIYSGIYVVLGSFAENYRLHSKQDEDEKNLVSKAAVVKGVL 358
M +SDELLGT API+VYW+YSGIYV L S E+YRLHSK +E+EKNLVSK++VVKGVL
Sbjct: 3 MGFAVSDELLGTVAPIVVYWLYSGIYVALSSL-ESYRLHSKVEEEEKNLVSKSSVVKGVL 61
Query: 359 IQQALQAVVATLLFAVAGSDSQNPGSQNASLLVSLRQFVTAM 484
+QQ +QAVVA LLF V GSD++ +Q S LV RQFVTAM
Sbjct: 62 VQQVVQAVVAILLFTVTGSDAEADKAQQFSFLVLARQFVTAM 103
>pir||B96718 probable sterol desaturase T6C23.16 [imported] - Arabidopsis
thaliana gi|10092291|gb|AAG12703.1|AC021046_4 acid
phosphatase, putative; 5376-6903 [Arabidopsis thaliana]
gi|12325199|gb|AAG52550.1|AC013289_17 putative sterol
desaturase; 75442-76969 [Arabidopsis thaliana]
Length = 258
Score = 131 bits (329), Expect = 5e-30
Identities = 68/102 (66%), Positives = 81/102 (78%)
Frame = +2
Query: 179 MDLGISDELLGTFAPILVYWIYSGIYVVLGSFAENYRLHSKQDEDEKNLVSKAAVVKGVL 358
M +SDELLGT API+VYW+YSGIYV L S E+YRLHSK +E+EKNLVSK++VVKGVL
Sbjct: 1 MGFAVSDELLGTVAPIVVYWLYSGIYVALSSL-ESYRLHSKVEEEEKNLVSKSSVVKGVL 59
Query: 359 IQQALQAVVATLLFAVAGSDSQNPGSQNASLLVSLRQFVTAM 484
+QQ +QAVVA LLF V GSD++ +Q S LV RQFVTAM
Sbjct: 60 VQQVVQAVVAILLFTVTGSDAEADKAQQFSFLVLARQFVTAM 101
>ref|NP_563944.1| acid phosphatase, putative; protein id: At1g14290.1, supported by
cDNA: gi_13605749 [Arabidopsis thaliana]
gi|13605750|gb|AAK32868.1|AF361856_1 At1g14290/F14L17_4
[Arabidopsis thaliana] gi|24797014|gb|AAN64519.1|
At1g14290/F14L17_4 [Arabidopsis thaliana]
Length = 259
Score = 128 bits (322), Expect = 3e-29
Identities = 63/102 (61%), Positives = 79/102 (76%)
Frame = +2
Query: 179 MDLGISDELLGTFAPILVYWIYSGIYVVLGSFAENYRLHSKQDEDEKNLVSKAAVVKGVL 358
M ISDE LGTF PILVYW+YSG+Y+ LGS + YRLHSK DEDEKNLVSK+AVVKGVL
Sbjct: 2 MSFVISDEFLGTFVPILVYWVYSGMYICLGSL-DKYRLHSKIDEDEKNLVSKSAVVKGVL 60
Query: 359 IQQALQAVVATLLFAVAGSDSQNPGSQNASLLVSLRQFVTAM 484
+QQ LQA+++ +LF + GSD+ +Q S+L+ RQF+ AM
Sbjct: 61 LQQTLQAIISVILFKITGSDADAATTQQFSILLLARQFIIAM 102
>pir||A86277 F14L17.5 protein - Arabidopsis thaliana
gi|7262670|gb|AAF43928.1|AC012188_5 Contains similarity
to acid phosphatase from Lupinus albus gb|AB023385 and
contains a Sterol desaturase PF|01598 domain. EST
gb|AI995340 comes from this gene. [Arabidopsis thaliana]
Length = 258
Score = 128 bits (322), Expect = 3e-29
Identities = 63/102 (61%), Positives = 79/102 (76%)
Frame = +2
Query: 179 MDLGISDELLGTFAPILVYWIYSGIYVVLGSFAENYRLHSKQDEDEKNLVSKAAVVKGVL 358
M ISDE LGTF PILVYW+YSG+Y+ LGS + YRLHSK DEDEKNLVSK+AVVKGVL
Sbjct: 1 MSFVISDEFLGTFVPILVYWVYSGMYICLGSL-DKYRLHSKIDEDEKNLVSKSAVVKGVL 59
Query: 359 IQQALQAVVATLLFAVAGSDSQNPGSQNASLLVSLRQFVTAM 484
+QQ LQA+++ +LF + GSD+ +Q S+L+ RQF+ AM
Sbjct: 60 LQQTLQAIISVILFKITGSDADAATTQQFSILLLARQFIIAM 101
>dbj|BAA82130.1| acid phosphatase [Lupinus albus]
Length = 638
Score = 107 bits (267), Expect = 7e-23
Identities = 56/75 (74%), Positives = 66/75 (87%)
Frame = +2
Query: 260 VLGSFAENYRLHSKQDEDEKNLVSKAAVVKGVLIQQALQAVVATLLFAVAGSDSQNPGSQ 439
VLG F+ENYRLH+KQ+EDEKNL SK A+VKGV++QQ +QAVVATLLFAV G+DSQ+ +Q
Sbjct: 428 VLGLFSENYRLHTKQEEDEKNLASKGAMVKGVILQQVVQAVVATLLFAVTGNDSQDT-NQ 486
Query: 440 NASLLVSLRQFVTAM 484
NASLLVS RQFV AM
Sbjct: 487 NASLLVSARQFVIAM 501
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 428,525,479
Number of Sequences: 1393205
Number of extensions: 9767281
Number of successful extensions: 25526
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 24648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25486
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13980339936
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
