Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010494A_C01 KMC010494A_c01
(538 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179134.1| leucine rich repeat protein family; protein id:... 148 5e-35
gb|AAM63268.1| putative leucine-rich repeat disease resistance p... 147 6e-35
ref|NP_191510.1| leucine rich repeat protein family; protein id:... 74 9e-13
ref|NP_196345.1| receptor-like protein kinase-like protein; prot... 56 3e-07
emb|CAD42912.1| extra sporogenous cells [Arabidopsis thaliana] 56 3e-07
>ref|NP_179134.1| leucine rich repeat protein family; protein id: At2g15320.1,
supported by cDNA: 20900., supported by cDNA:
gi_15292804, supported by cDNA: gi_20258860 [Arabidopsis
thaliana] gi|25411629|pir||E84527 hypothetical protein
At2g15320 [imported] - Arabidopsis thaliana
gi|4662629|gb|AAD26901.1| putative leucine-rich repeat
disease resistance protein [Arabidopsis thaliana]
gi|15292805|gb|AAK92771.1| putative leucine-rich repeat
disease resistance protein [Arabidopsis thaliana]
gi|20258861|gb|AAM14102.1| putative leucine-rich repeat
disease resistance protein [Arabidopsis thaliana]
Length = 382
Score = 148 bits (373), Expect = 5e-35
Identities = 71/125 (56%), Positives = 92/125 (72%)
Frame = -3
Query: 536 GVQISRPARGEGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGI 357
G+++ P +NLVAV LGFN+I+G APA+ AAYP+LSSLS+R+N L G IP EY
Sbjct: 256 GIEVLPPNLAGENNLVAVELGFNQIRGNAPASFAAYPRLSSLSMRYNVLHGVIPSEYERS 315
Query: 356 KSMKRLFLDGNFLDGKPPAGLVAAGAAVTGSLGDNCLQICPVSSKLCTTAQKPSSVCKQA 177
K+++RL+LDGNFL GKPPA V A V GSLG+NCLQ CP +K+C +QKP +CKQA
Sbjct: 316 KTLRRLYLDGNFLTGKPPARFVRTDAEVMGSLGNNCLQGCPGKAKMCAPSQKPFYICKQA 375
Query: 176 HRGRP 162
+ G+P
Sbjct: 376 YGGKP 380
>gb|AAM63268.1| putative leucine-rich repeat disease resistance protein
[Arabidopsis thaliana]
Length = 384
Score = 147 bits (372), Expect = 6e-35
Identities = 71/125 (56%), Positives = 92/125 (72%)
Frame = -3
Query: 536 GVQISRPARGEGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGI 357
G+++ P +NLVAV LGFN+I+G APA+ AAYP+LSSLS+R+N L G IP EY
Sbjct: 258 GIEVLPPNLAGENNLVAVELGFNQIRGNAPASFAAYPRLSSLSMRYNVLHGVIPSEYERS 317
Query: 356 KSMKRLFLDGNFLDGKPPAGLVAAGAAVTGSLGDNCLQICPVSSKLCTTAQKPSSVCKQA 177
K+++RL+LDGNFL GKPPA V A V GSLG+NCLQ CP +K+C +QKP +CKQA
Sbjct: 318 KTLRRLYLDGNFLTGKPPARFVRTDAEVMGSLGNNCLQGCPGKAKVCAPSQKPFYICKQA 377
Query: 176 HRGRP 162
+ G+P
Sbjct: 378 YGGKP 382
>ref|NP_191510.1| leucine rich repeat protein family; protein id: At3g59510.1
[Arabidopsis thaliana] gi|11358059|pir||T49292
hypothetical protein T16L24.60 - Arabidopsis thaliana
gi|6996287|emb|CAB75448.1| putative protein [Arabidopsis
thaliana]
Length = 419
Score = 74.3 bits (181), Expect = 9e-13
Identities = 42/114 (36%), Positives = 59/114 (50%), Gaps = 2/114 (1%)
Frame = -3
Query: 503 GSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGG--IKSMKRLFLD 330
GS L ++ N +QG+ P NLA Y L +++R N G IP YG S + L+L+
Sbjct: 304 GSRLRMLDAEGNHLQGHLPLNLATYENLKDINLRSNMFSGDIPRIYGKRLENSWRSLYLE 363
Query: 329 GNFLDGKPPAGLVAAGAAVTGSLGDNCLQICPVSSKLCTTAQKPSSVCKQAHRG 168
N+L G P + G+L +NCLQ CP + ++C QKP S C A G
Sbjct: 364 NNYLSGILPEEFQKITKQIRGNLSNNCLQ-CPKNVQICQGTQKPKSQCTNAMLG 416
Score = 42.7 bits (99), Expect = 0.003
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = -3
Query: 494 LVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLDGNFLD 315
L ++L N G PA + +L ++ + NS+ G IP ++S+ L L N LD
Sbjct: 145 LTKLSLAENFFTGDIPAEITRLKELKTIDLSKNSIAGEIPPRISALRSLTHLVLSNNHLD 204
Query: 314 GKPPA 300
G+ PA
Sbjct: 205 GRIPA 209
>ref|NP_196345.1| receptor-like protein kinase-like protein; protein id: At5g07280.1
[Arabidopsis thaliana] gi|11358755|pir||T48499
receptor-like protein kinase-like protein - Arabidopsis
thaliana gi|7546706|emb|CAB87284.1| receptor-like
protein kinase-like protein [Arabidopsis thaliana]
gi|22138765|emb|CAD32463.1| receptor-like protein
kinase-like protein [Arabidopsis thaliana]
Length = 1192
Score = 55.8 bits (133), Expect = 3e-07
Identities = 31/88 (35%), Positives = 43/88 (48%)
Frame = -3
Query: 506 EGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLDG 327
+ +NL+ +NR++GY PA + L L + N L G IP E G + S+ L L+
Sbjct: 446 KSTNLMEFTASYNRLEGYLPAEIGNAASLKRLVLSDNQLTGEIPREIGKLTSLSVLNLNA 505
Query: 326 NFLDGKPPAGLVAAGAAVTGSLGDNCLQ 243
N GK P L + T LG N LQ
Sbjct: 506 NMFQGKIPVELGDCTSLTTLDLGSNNLQ 533
Score = 45.8 bits (107), Expect = 3e-04
Identities = 30/88 (34%), Positives = 44/88 (49%)
Frame = -3
Query: 509 GEGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLD 330
GE LV ++L N + G PA+L+ L+ L + N+L G+IP E G ++ L L
Sbjct: 601 GECLVLVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLNLA 660
Query: 329 GNFLDGKPPAGLVAAGAAVTGSLGDNCL 246
N L+G P G+ V +L N L
Sbjct: 661 NNQLNGHIPESFGLLGSLVKLNLTKNKL 688
Score = 40.8 bits (94), Expect = 0.010
Identities = 24/66 (36%), Positives = 33/66 (49%)
Frame = -3
Query: 509 GEGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLD 330
G+ L ++ L NR G P + P L LS+ N L G+IP E G S++ + L
Sbjct: 326 GKWKVLDSLLLANNRFSGEIPHEIEDCPMLKHLSLASNLLSGSIPRELCGSGSLEAIDLS 385
Query: 329 GNFLDG 312
GN L G
Sbjct: 386 GNLLSG 391
Score = 40.4 bits (93), Expect = 0.014
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = -3
Query: 494 LVAVNLGFNRIQGYAPANL-AAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLDGNFL 318
L+ ++L N G P + + P LSSL + +NSL G IP E G + ++ L++ N
Sbjct: 139 LLYLDLSDNHFSGSLPPSFFISLPALSSLDVSNNSLSGEIPPEIGKLSNLSNLYMGLNSF 198
Query: 317 DGKPPA 300
G+ P+
Sbjct: 199 SGQIPS 204
Score = 38.5 bits (88), Expect = 0.052
Identities = 17/45 (37%), Positives = 28/45 (61%)
Frame = -3
Query: 509 GEGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIP 375
G+ ++L ++LG N +QG P + A QL L + +N+L G+IP
Sbjct: 517 GDCTSLTTLDLGSNNLQGQIPDKITALAQLQCLVLSYNNLSGSIP 561
Score = 36.2 bits (82), Expect = 0.26
Identities = 18/41 (43%), Positives = 26/41 (62%)
Frame = -3
Query: 425 QLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLDGNFLDGKPP 303
+++SLS+ SLRG IP E +K+++ L L GN GK P
Sbjct: 66 RVNSLSLPSLSLRGQIPKEISSLKNLRELCLAGNQFSGKIP 106
Score = 33.9 bits (76), Expect = 1.3
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = -3
Query: 464 IQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLDGNFLDGKPPAGLVAA 285
++G P +++ L L + N G IP E +K ++ L L GN L G P L
Sbjct: 77 LRGQIPKEISSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPRLLSEL 136
Query: 284 GAAVTGSLGDN 252
+ L DN
Sbjct: 137 PQLLYLDLSDN 147
Score = 33.1 bits (74), Expect = 2.2
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = -3
Query: 509 GEGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLD 330
GE NL +NL + G P L L SL + NSL G +PLE I + +
Sbjct: 255 GELHNLSILNLVSAELIGLIPPELGNCKSLKSLMLSFNSLSGPLPLELSEI-PLLTFSAE 313
Query: 329 GNFLDGKPPA 300
N L G P+
Sbjct: 314 RNQLSGSLPS 323
>emb|CAD42912.1| extra sporogenous cells [Arabidopsis thaliana]
Length = 1192
Score = 55.8 bits (133), Expect = 3e-07
Identities = 31/88 (35%), Positives = 43/88 (48%)
Frame = -3
Query: 506 EGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLDG 327
+ +NL+ +NR++GY PA + L L + N L G IP E G + S+ L L+
Sbjct: 446 KSTNLMEFTASYNRLEGYLPAEIGNAASLKRLVLSDNQLTGEIPREIGKLTSLSVLNLNA 505
Query: 326 NFLDGKPPAGLVAAGAAVTGSLGDNCLQ 243
N GK P L + T LG N LQ
Sbjct: 506 NMFQGKIPVELGDCTSLTTLDLGSNNLQ 533
Score = 45.8 bits (107), Expect = 3e-04
Identities = 30/88 (34%), Positives = 44/88 (49%)
Frame = -3
Query: 509 GEGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLD 330
GE LV ++L N + G PA+L+ L+ L + N+L G+IP E G ++ L L
Sbjct: 601 GECLVLVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLNLA 660
Query: 329 GNFLDGKPPAGLVAAGAAVTGSLGDNCL 246
N L+G P G+ V +L N L
Sbjct: 661 NNQLNGHIPESFGLLGSLVKLNLTKNKL 688
Score = 41.2 bits (95), Expect = 0.008
Identities = 24/66 (36%), Positives = 33/66 (49%)
Frame = -3
Query: 509 GEGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLD 330
G+ L ++ L NR G P + P L LS+ N L G+IP E G S++ + L
Sbjct: 326 GKWKVLDSLLLANNRFSGEIPREIEDCPMLKHLSLASNLLSGSIPRELCGSGSLEAIDLS 385
Query: 329 GNFLDG 312
GN L G
Sbjct: 386 GNLLSG 391
Score = 40.8 bits (94), Expect = 0.010
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = -3
Query: 518 PAR-GEGSNLVAVNLGFNRIQGYAPANL-AAYPQLSSLSIRHNSLRGAIPLEYGGIKSMK 345
P+R E L+ ++L N G P + + P LSSL + +NSL G IP E G + ++
Sbjct: 130 PSRLSELPELLYLDLSDNHFSGSLPLSFFISLPALSSLDVSNNSLSGEIPPEIGKLSNLS 189
Query: 344 RLFLDGNFLDGKPPA 300
L++ N G+ P+
Sbjct: 190 NLYMGLNSFSGQIPS 204
Score = 38.5 bits (88), Expect = 0.052
Identities = 17/45 (37%), Positives = 28/45 (61%)
Frame = -3
Query: 509 GEGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIP 375
G+ ++L ++LG N +QG P + A QL L + +N+L G+IP
Sbjct: 517 GDCTSLTTLDLGSNNLQGQIPDKITALAQLQCLVLSYNNLSGSIP 561
Score = 36.2 bits (82), Expect = 0.26
Identities = 18/41 (43%), Positives = 26/41 (62%)
Frame = -3
Query: 425 QLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLDGNFLDGKPP 303
+++SLS+ SLRG IP E +K+++ L L GN GK P
Sbjct: 66 RVNSLSLPSLSLRGQIPKEISSLKNLRELCLAGNQFSGKIP 106
Score = 35.4 bits (80), Expect = 0.44
Identities = 21/71 (29%), Positives = 32/71 (44%)
Frame = -3
Query: 464 IQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLDGNFLDGKPPAGLVAA 285
++G P +++ L L + N G IP E +K ++ L L GN L G P+ L
Sbjct: 77 LRGQIPKEISSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPSRLSEL 136
Query: 284 GAAVTGSLGDN 252
+ L DN
Sbjct: 137 PELLYLDLSDN 147
Score = 33.9 bits (76), Expect = 1.3
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 497 NLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYG-GIKSMKRLFLDGNF 321
+L ++L N + G P+ L+ P+L L + N G++PL + + ++ L + N
Sbjct: 114 HLQTLDLSGNSLTGLLPSRLSELPELLYLDLSDNHFSGSLPLSFFISLPALSSLDVSNNS 173
Query: 320 LDGKPP 303
L G+ P
Sbjct: 174 LSGEIP 179
Score = 33.1 bits (74), Expect = 2.2
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = -3
Query: 509 GEGSNLVAVNLGFNRIQGYAPANLAAYPQLSSLSIRHNSLRGAIPLEYGGIKSMKRLFLD 330
GE NL +NL + G P L L SL + NSL G +PLE I + +
Sbjct: 255 GELQNLSILNLVSAELIGSIPPELGNCKSLKSLMLSFNSLSGPLPLELSEI-PLLTFSAE 313
Query: 329 GNFLDGKPPA 300
N L G P+
Sbjct: 314 RNQLSGSLPS 323
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 471,380,972
Number of Sequences: 1393205
Number of extensions: 10588171
Number of successful extensions: 40843
Number of sequences better than 10.0: 780
Number of HSP's better than 10.0 without gapping: 37498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40731
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
