>KMC010474A_C01 KMC010474A_c01
acaaaatATGTCTATATTTGATTTAACTAAATCAAATCAGAAGTGTATCATAACCTCAAT
CAAATAAAATTCAATGACAGATACACGCATATTATTAATTTACAACAAGCTCTATTATGT
GTAAAAATAATAGACATCAATCGTGCAGAGACATAAATTGTCTTTAACAGTTACTAAAAC
ATGGACACTGATACATCTATCATTAGGACTAGAAGTATAGTGTCTTATGCATGAGTATTC
AATAATTGTCTGAAACATACAGAATCCCTCTTTTATGGATCGGGACATGTATAAATATGA
TGACAAAAATAGTTCAATTAATGTAAAACCTTGGATCAGAAAACTGTACCTCCTGCAGTT
TGTTTCAAACTGTAGAGGATTTATTCCCATC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC010474A_C01 KMC010474A_c01
         (391 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_663222.1| unknown [Phthorimaea operculella granulovirus] ...    40  0.005
gb|EAA39286.1| GLP_532_15619_7592 [Giardia lamblia ATCC 50803]         33  0.87
pir||E86305 probable trehalose-6-phosphate synthase [imported] -...    31  4.3
ref|NP_173142.1| trehalose-6-phosphate synthase, putative; prote...    31  4.3
gb|AAA21196.1| polyprotein                                             30  7.3

>ref|NP_663222.1| unknown [Phthorimaea operculella granulovirus]
           gi|21637038|gb|AAM70255.1| unknown [Phthorimaea
           operculella granulovirus]
          Length = 138

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 24/77 (31%), Positives = 38/77 (49%)
 Frame = -2

Query: 384 INPLQFETNCRRYSFLIQGFTLIELFLSSYLYMSRSIKEGFCMFQTIIEYSCIRHYTSSP 205
           +NP+Q+E N R +   + G  ++   LSS L M R+  EG  +   +  Y+C+  YT   
Sbjct: 54  MNPIQYEENLRLHKLEV-GIRMMAACLSSLLNMGRN--EGIQILDCVYNYNCMSKYTEKR 110

Query: 204 NDRCISVHVLVTVKDNL 154
               + V V   V +NL
Sbjct: 111 LKNYVDVDVRTYVSENL 127

>gb|EAA39286.1| GLP_532_15619_7592 [Giardia lamblia ATCC 50803]
          Length = 2675

 Score = 33.1 bits (74), Expect = 0.87
 Identities = 17/46 (36%), Positives = 24/46 (51%)
 Frame = -2

Query: 357  CRRYSFLIQGFTLIELFLSSYLYMSRSIKEGFCMFQTIIEYSCIRH 220
            C  Y F +  FT    FL +YLY   S+ +G     ++I YS IR+
Sbjct: 2237 CIPYEFSLPDFTASVQFLQNYLYGLDSVVKGAAQKGSLISYSTIRY 2282

>pir||E86305 probable trehalose-6-phosphate synthase [imported] - Arabidopsis
           thaliana gi|9802765|gb|AAF99834.1|AC051629_1 Putative
           trehalose-6-phosphate synthase [Arabidopsis thaliana]
          Length = 822

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 12/41 (29%), Positives = 23/41 (55%)
 Frame = +2

Query: 224 LMHEYSIIV*NIQNPSFMDRDMYKYDDKNSSINVKPWIRKL 346
           L+H+ +++       SF D ++Y+  D N++ N K WI  +
Sbjct: 767 LLHKLAVVADTTMTDSFSDSEIYEPRDANANENSKRWINSV 807

>ref|NP_173142.1| trehalose-6-phosphate synthase, putative; protein id: At1g16980.1
           [Arabidopsis thaliana]
          Length = 821

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 12/41 (29%), Positives = 23/41 (55%)
 Frame = +2

Query: 224 LMHEYSIIV*NIQNPSFMDRDMYKYDDKNSSINVKPWIRKL 346
           L+H+ +++       SF D ++Y+  D N++ N K WI  +
Sbjct: 766 LLHKLAVVADTTMTDSFSDSEIYEPRDANANENSKRWINSV 806

>gb|AAA21196.1| polyprotein
          Length = 659

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -2

Query: 348 YSFLIQGFTLIELFLSSYLYMSRSIKEGFCMFQTIIEYSCIRHYTSSPNDRCISV 184
           ++F   GFTL+ LFL+ Y+        G  M Q ++ ++ +   T S   RC+ V
Sbjct: 126 WAFRHPGFTLLALFLAHYI--------GTSMTQKVVIFTLLMLVTPSMTMRCVGV 172

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 286,475,583
Number of Sequences: 1393205
Number of extensions: 5273920
Number of successful extensions: 8930
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8928
length of database: 448,689,247
effective HSP length: 105
effective length of database: 302,402,722
effective search space used: 7257665328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPDL086a02_f BP057367 1 331 2 MR089c11_f BP082834 8 391

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