Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010397A_C01 KMC010397A_c01
(508 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN86274.1| non-cell-autonomous heat shock cognate protein 70... 280 7e-75
gb|AAB88009.1| heat shock cognate protein HSC70 [Brassica napus] 279 1e-74
ref|NP_195870.1| dnaK-type molecular chaperone hsc70.1; protein ... 277 4e-74
pir||S46302 dnaK-type molecular chaperone hsc70.1 - Arabidopsis ... 277 4e-74
pir||T45522 heat shock protein HSC70-1, cytosolic [imported] - s... 277 4e-74
>gb|AAN86274.1| non-cell-autonomous heat shock cognate protein 70 [Cucurbita
maxima]
Length = 647
Score = 280 bits (716), Expect = 7e-75
Identities = 139/150 (92%), Positives = 145/150 (96%)
Frame = +2
Query: 59 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 238
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKN
Sbjct: 1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 60
Query: 239 QVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVNSGPAEKPMIQVSYKGEDKQFAA 418
QVAMNPINTVFDAKRLIGRR SDA VQSD+KLWPFKV +GP +KPMI VSYKGEDKQFAA
Sbjct: 61 QVAMNPINTVFDAKRLIGRRFSDAPVQSDIKLWPFKVIAGPGDKPMIVVSYKGEDKQFAA 120
Query: 419 EEISSMVLMKMREIAEAYLGSTIKNAVVTV 508
EEISSMVL+KMREIAEAYLGST+KNAVVTV
Sbjct: 121 EEISSMVLIKMREIAEAYLGSTVKNAVVTV 150
>gb|AAB88009.1| heat shock cognate protein HSC70 [Brassica napus]
Length = 645
Score = 279 bits (713), Expect = 1e-74
Identities = 138/150 (92%), Positives = 146/150 (97%)
Frame = +2
Query: 59 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 238
M+GKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKN
Sbjct: 1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 60
Query: 239 QVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVNSGPAEKPMIQVSYKGEDKQFAA 418
QVAMNPINTVFDAKRLIGRR SD+SVQSDMKLWPFK+ +GPAEKPMI V+YKGE+KQFAA
Sbjct: 61 QVAMNPINTVFDAKRLIGRRFSDSSVQSDMKLWPFKIIAGPAEKPMIVVNYKGEEKQFAA 120
Query: 419 EEISSMVLMKMREIAEAYLGSTIKNAVVTV 508
EEISSMVL+KMREIAEAYLG TIKNAVVTV
Sbjct: 121 EEISSMVLIKMREIAEAYLGVTIKNAVVTV 150
>ref|NP_195870.1| dnaK-type molecular chaperone hsc70.1; protein id: At5g02500.1,
supported by cDNA: gi_15982748 [Arabidopsis thaliana]
gi|12643273|sp|P22953|HS71_ARATH Heat shock cognate 70
kDa protein 1 (Hsc70.1) gi|11277132|pir||T48271
dnaK-type molecular chaperone hsc70.1 - Arabidopsis
thaliana gi|7413639|emb|CAB85987.1| dnaK-type molecular
chaperone hsc70.1 [Arabidopsis thaliana]
gi|15982749|gb|AAL09715.1| AT5g02500/T22P11_90
[Arabidopsis thaliana] gi|21539505|gb|AAM53305.1|
DnaK-type molecular chaperone hsc70.1 [Arabidopsis
thaliana] gi|27754259|gb|AAO22583.1| putative dnaK-type
molecular chaperone hsc70.1 protein [Arabidopsis
thaliana]
Length = 651
Score = 277 bits (709), Expect = 4e-74
Identities = 135/150 (90%), Positives = 145/150 (96%)
Frame = +2
Query: 59 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 238
M+GKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKN
Sbjct: 1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 60
Query: 239 QVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVNSGPAEKPMIQVSYKGEDKQFAA 418
QVAMNP+NTVFDAKRLIGRR SD+SVQSDMKLWPFK+ +GPA+KPMI V YKGE+K+FAA
Sbjct: 61 QVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAA 120
Query: 419 EEISSMVLMKMREIAEAYLGSTIKNAVVTV 508
EEISSMVL+KMREIAEAYLG TIKNAVVTV
Sbjct: 121 EEISSMVLIKMREIAEAYLGVTIKNAVVTV 150
>pir||S46302 dnaK-type molecular chaperone hsc70.1 - Arabidopsis thaliana
gi|397482|emb|CAA52684.1| heat shock protein 70 cognate
[Arabidopsis thaliana]
Length = 651
Score = 277 bits (709), Expect = 4e-74
Identities = 135/150 (90%), Positives = 145/150 (96%)
Frame = +2
Query: 59 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 238
M+GKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKN
Sbjct: 1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 60
Query: 239 QVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVNSGPAEKPMIQVSYKGEDKQFAA 418
QVAMNP+NTVFDAKRLIGRR SD+SVQSDMKLWPFK+ +GPA+KPMI V YKGE+K+FAA
Sbjct: 61 QVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAA 120
Query: 419 EEISSMVLMKMREIAEAYLGSTIKNAVVTV 508
EEISSMVL+KMREIAEAYLG TIKNAVVTV
Sbjct: 121 EEISSMVLIKMREIAEAYLGVTIKNAVVTV 150
>pir||T45522 heat shock protein HSC70-1, cytosolic [imported] - spinach
gi|425194|gb|AAA62445.1| heat shock protein
gi|2660772|gb|AAB88134.1| cytosolic heat shock 70
protein [Spinacia oleracea]
Length = 647
Score = 277 bits (709), Expect = 4e-74
Identities = 138/150 (92%), Positives = 144/150 (96%)
Frame = +2
Query: 59 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 238
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKN
Sbjct: 1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 60
Query: 239 QVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVNSGPAEKPMIQVSYKGEDKQFAA 418
QVAMNPINTVFDAKRLIGRR SDASVQ+DMK WPFKV SGP EKPMI V+YKGE+KQFAA
Sbjct: 61 QVAMNPINTVFDAKRLIGRRFSDASVQADMKHWPFKVVSGPGEKPMIGVNYKGEEKQFAA 120
Query: 419 EEISSMVLMKMREIAEAYLGSTIKNAVVTV 508
EEISSMVL KM+EIAEAYLGST+KNAVVTV
Sbjct: 121 EEISSMVLTKMKEIAEAYLGSTVKNAVVTV 150
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,599,655
Number of Sequences: 1393205
Number of extensions: 9485786
Number of successful extensions: 30644
Number of sequences better than 10.0: 1330
Number of HSP's better than 10.0 without gapping: 28067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29370
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
