Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010394A_C01 KMC010394A_c01
(522 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_732551.1| CG31203-PC [Drosophila melanogaster] gi|2317602... 34 1.2
ref|NP_732547.1| CG31203-PA [Drosophila melanogaster] gi|2464850... 34 1.2
ref|NP_608017.1| leucine-rich protein [Streptococcus pyogenes MG... 32 5.8
ref|NP_665501.1| leucine-rich protein [Streptococcus pyogenes MG... 32 5.8
ref|NP_269943.1| leucine-rich protein [Streptococcus pyogenes] g... 32 5.8
>ref|NP_732551.1| CG31203-PC [Drosophila melanogaster] gi|23176026|gb|AAN14367.1|
CG31203-PC [Drosophila melanogaster]
Length = 364
Score = 33.9 bits (76), Expect = 1.2
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Frame = -3
Query: 385 ANWYFPNFSLLYFSF*RLG-------ERDSDITQD*LKSFLGRSSSVIYF---CLNFQLL 236
A W+F NFSLL+F LG E+ SDI D L+ F R +V F CL F +L
Sbjct: 37 AAWFFTNFSLLFFPIYLLGLVSTRKCEKLSDILGDVLRGFRERGFTVGRFLNRCLCFCIL 96
>ref|NP_732547.1| CG31203-PA [Drosophila melanogaster] gi|24648505|ref|NP_732548.1|
CG31203-PB [Drosophila melanogaster]
gi|24648507|ref|NP_732549.1| CG31203-PD [Drosophila
melanogaster] gi|24648509|ref|NP_732550.1| CG31203-PE
[Drosophila melanogaster] gi|17861670|gb|AAL39312.1|
GH20388p [Drosophila melanogaster]
gi|23176022|gb|AAF55803.2| CG31203-PA [Drosophila
melanogaster] gi|23176023|gb|AAN14365.1| CG31203-PB
[Drosophila melanogaster] gi|23176024|gb|AAF55801.2|
CG31203-PD [Drosophila melanogaster]
gi|23176025|gb|AAN14366.1| CG31203-PE [Drosophila
melanogaster]
Length = 578
Score = 33.9 bits (76), Expect = 1.2
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Frame = -3
Query: 385 ANWYFPNFSLLYFSF*RLG-------ERDSDITQD*LKSFLGRSSSVIYF---CLNFQLL 236
A W+F NFSLL+F LG E+ SDI D L+ F R +V F CL F +L
Sbjct: 251 AAWFFTNFSLLFFPIYLLGLVSTRKCEKLSDILGDVLRGFRERGFTVGRFLNRCLCFCIL 310
>ref|NP_608017.1| leucine-rich protein [Streptococcus pyogenes MGAS8232]
gi|19749124|gb|AAL98516.1| leucine-rich protein
[Streptococcus pyogenes MGAS8232]
Length = 282
Score = 31.6 bits (70), Expect = 5.8
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = -2
Query: 500 MLKHY*LLKATTPFHVSSSPMSCCTTLIH----DHHPLTQDSC*LVFPQFLFIILFLLKV 333
+L H+ L T FH SP S ++H +H L Q + Q L+I L+
Sbjct: 200 LLSHHTFLALTRQFHQFLSPQSDMADVVHALWSEHGNLVQTA------QRLYIHRNSLQY 253
Query: 332 GGKRFRYYSRLAEKFSGEELFSHLFLFKF 246
+F S L K + F+HLFL K+
Sbjct: 254 KLDKFAQQSGLHLKQLDDLAFAHLFLLKY 282
>ref|NP_665501.1| leucine-rich protein [Streptococcus pyogenes MGAS315]
gi|21905446|gb|AAM80304.1| leucine-rich protein
[Streptococcus pyogenes MGAS315]
Length = 282
Score = 31.6 bits (70), Expect = 5.8
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = -2
Query: 500 MLKHY*LLKATTPFHVSSSPMSCCTTLIH----DHHPLTQDSC*LVFPQFLFIILFLLKV 333
+L H+ L T FH SP S ++H +H L Q + Q L+I L+
Sbjct: 200 LLSHHTFLALTRQFHQFLSPQSDMADVVHALWSEHGNLVQTA------QRLYIHRNSLQY 253
Query: 332 GGKRFRYYSRLAEKFSGEELFSHLFLFKF 246
+F S L K + F+HLFL K+
Sbjct: 254 KLDKFAQQSGLHLKQLDDLAFAHLFLLKY 282
>ref|NP_269943.1| leucine-rich protein [Streptococcus pyogenes]
gi|13622992|gb|AAK34664.1| leucine-rich protein
[Streptococcus pyogenes M1 GAS]
Length = 282
Score = 31.6 bits (70), Expect = 5.8
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = -2
Query: 500 MLKHY*LLKATTPFHVSSSPMSCCTTLIH----DHHPLTQDSC*LVFPQFLFIILFLLKV 333
+L H+ L T FH SP S ++H +H L Q + Q L+I L+
Sbjct: 200 LLSHHTFLALTRQFHQFLSPQSDMADVVHALWSEHGNLVQTA------QRLYIHRNSLQY 253
Query: 332 GGKRFRYYSRLAEKFSGEELFSHLFLFKF 246
+F S L K + F+HLFL K+
Sbjct: 254 KLDKFAQQSGLHLKQLDDLAFAHLFLLKY 282
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 401,186,983
Number of Sequences: 1393205
Number of extensions: 8172316
Number of successful extensions: 16459
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16442
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
