Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010360A_C01 KMC010360A_c01
(840 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO50779.1| similar to Mus musculus (Mouse). Sex-determining ... 63 6e-09
gb|AAM44363.1| hypothetical protein [Dictyostelium discoideum] g... 60 3e-08
ref|XP_238128.1| hypothetical protein XP_238128 [Rattus norvegicus] 59 1e-07
sp|P04929|HRPX_PLALO HISTIDINE-RICH GLYCOPROTEIN PRECURSOR gi|72... 57 4e-07
ref|NP_444406.1| histidine-rich glycoprotein [Mus musculus] gi|1... 55 1e-06
>gb|AAO50779.1| similar to Mus musculus (Mouse). Sex-determining region Y protein
(Testis-determining factor) [Dictyostelium discoideum]
Length = 1461
Score = 62.8 bits (151), Expect = 6e-09
Identities = 29/92 (31%), Positives = 42/92 (45%)
Frame = +2
Query: 362 QEHKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHD 541
Q+H+ H Q H HQHQHQHQHQHQH H +H H H+ Q H
Sbjct: 1066 QQHQ-HQHQQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHQQHQQHQQHQQQHHH 1124
Query: 542 HSSEIHSGENRHGYSFFSFSHGDSPSLSGLKN 637
++ H +N+H + ++ + S + N
Sbjct: 1125 QQNQHHHQQNQHQQNTMNYQQMFGQTFSEINN 1156
Score = 43.1 bits (100), Expect = 0.005
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +2
Query: 335 QKTPKNEN*QEHKARSHSQFHHHHQHQHQHQ-HQHQHHLS*PKPSGHFSPSEHGSVDHGN 511
Q+ + + Q + + Q H HQ QHQHQ HQHQ H + H +H
Sbjct: 1031 QQQQQQQQQQHQQQQQQQQQQHQHQQQHQHQQHQHQQHQHQHQQHQHQHQHQHQHQHQHQ 1090
Query: 512 HRDDGSQCHDHSSEIHSGENRH 577
H+ H H H +++H
Sbjct: 1091 HQHQHQHQHQHQ---HQHQHQH 1109
Score = 42.0 bits (97), Expect = 0.011
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +2
Query: 362 QEHKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHD 541
Q+ + + H Q H H Q QHQ HQ HH + H +H H + Q
Sbjct: 940 QQQQQQPHQQPHQHQQQQHQQPHQQPHHQQQHHQNNHQQHQQHQQHQHHQQQQLQQQQQQ 999
Query: 542 HSSEIHSGENRH 577
+ H +H
Sbjct: 1000 QQQQQHHQHQQH 1011
Score = 40.4 bits (93), Expect = 0.033
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +2
Query: 335 QKTPKNEN*QEHKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNH 514
Q+ + + Q+ + + H Q Q QHQHQ QHQH + H +H H
Sbjct: 1025 QQQQQQQQQQQQQQQQHQQQQQQQQQQHQHQQQHQHQQHQHQQHQH-QHQQHQHQHQHQH 1083
Query: 515 RDDGSQCHDHSSEIHSGENRH 577
+ H H + H +++H
Sbjct: 1084 QHQHQHQHQHQHQ-HQHQHQH 1103
Score = 37.7 bits (86), Expect = 0.21
Identities = 16/72 (22%), Positives = 26/72 (35%)
Frame = +2
Query: 362 QEHKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHD 541
Q+ + + Q HH HQ H HQ Q Q + + H + Q H
Sbjct: 994 QQQQQQQQQQQHHQHQQHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQHQ 1053
Query: 542 HSSEIHSGENRH 577
H + +++H
Sbjct: 1054 HQQQHQHQQHQH 1065
Score = 35.8 bits (81), Expect = 0.81
Identities = 19/81 (23%), Positives = 31/81 (37%)
Frame = +2
Query: 335 QKTPKNEN*QEHKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNH 514
Q+ + + Q+ + + Q H Q Q Q Q QHQH +H H H
Sbjct: 1019 QQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQHQHQQQHQHQQHQHQQHQH---QHQQH 1075
Query: 515 RDDGSQCHDHSSEIHSGENRH 577
+ H H + H +++H
Sbjct: 1076 QHQHQHQHQHQHQ-HQHQHQH 1095
Score = 35.4 bits (80), Expect = 1.1
Identities = 20/91 (21%), Positives = 32/91 (34%), Gaps = 10/91 (10%)
Frame = +2
Query: 335 QKTPKNEN*QEHKARSHSQFHHHHQHQHQHQHQHQHHLS*P----------KPSGHFSPS 484
Q+ + + Q+ + Q HHHHQ Q Q Q Q Q +
Sbjct: 991 QQLQQQQQQQQQQQHHQHQQHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQ 1050
Query: 485 EHGSVDHGNHRDDGSQCHDHSSEIHSGENRH 577
+H H+ Q H H + H +++H
Sbjct: 1051 QHQHQQQHQHQQHQHQQHQHQHQQHQHQHQH 1081
Score = 33.1 bits (74), Expect = 5.2
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 17/45 (37%)
Frame = +2
Query: 362 QEHKARSHSQFHHHHQHQHQ-----------------HQHQHQHH 445
Q+H +H Q H QHQH HQHQ HH
Sbjct: 969 QQHHQNNHQQHQQHQQHQHHQQQQLQQQQQQQQQQQHHQHQQHHH 1013
Score = 32.3 bits (72), Expect = 8.9
Identities = 10/32 (31%), Positives = 16/32 (49%)
Frame = +2
Query: 350 NEN*QEHKARSHSQFHHHHQHQHQHQHQHQHH 445
N N +++ HH+H H H H H H ++
Sbjct: 803 NNNNNNINNSNNNNIHHNHHHHHHHHHHHNNN 834
>gb|AAM44363.1| hypothetical protein [Dictyostelium discoideum]
gi|28828387|gb|AAM09303.2| similar to Plasmodium
lophurae. Histidine-rich glycoprotein precursor
[Dictyostelium discoideum]
Length = 233
Score = 60.5 bits (145), Expect = 3e-08
Identities = 34/119 (28%), Positives = 38/119 (31%), Gaps = 5/119 (4%)
Frame = +2
Query: 344 PKNEN*QEHKARSHSQFHHHHQHQHQHQHQHQHHLS*P-----KPSGHFSPSEHGSVDHG 508
P N H H HHHH H H H H H HH P P H P H H
Sbjct: 60 PNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHH 119
Query: 509 NHRDDGSQCHDHSSEIHSGENRHGYSFFSFSHGDSPSLSGLKNPQISVQLSPPLLPNQH 685
+H H H H + H + H P +P P L PN H
Sbjct: 120 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHH--PHPHPHPHPHPHLHPNPH 176
Score = 50.4 bits (119), Expect = 3e-05
Identities = 24/70 (34%), Positives = 25/70 (35%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H HHHH H H H H H HH P P H P H + H H H
Sbjct: 132 HHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHH 191
Query: 548 SEIHSGENRH 577
H N H
Sbjct: 192 ---HPNPNPH 198
Score = 48.9 bits (115), Expect = 9e-05
Identities = 21/64 (32%), Positives = 22/64 (33%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H HHHH H H H H H HH P H P H + H H H
Sbjct: 128 HHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHP 187
Query: 548 SEIH 559
H
Sbjct: 188 HPHH 191
Score = 46.6 bits (109), Expect = 5e-04
Identities = 24/80 (30%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQH---HLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCH 538
H H HHHH H H H H H H HL P P H P H +H + H
Sbjct: 142 HHHHHHHHHHHHHPHHHPHPHPHPHPHPHLH-PNPHPHPHPHPHPHPHPHHHPNPNPHPH 200
Query: 539 DHSSEIHSGENRHGYSFFSF 598
H H ++ S+
Sbjct: 201 PHPHPHHHHHHQEASECLSY 220
Score = 46.6 bits (109), Expect = 5e-04
Identities = 20/59 (33%), Positives = 21/59 (34%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDH 544
H H HHHH H H H H H HH P H P H H + H H
Sbjct: 124 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPH 182
>ref|XP_238128.1| hypothetical protein XP_238128 [Rattus norvegicus]
Length = 102
Score = 58.5 bits (140), Expect = 1e-07
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 441 CWCWCWCWCWCW*WW*N 391
CWCWCWCWCWCW WW N
Sbjct: 53 CWCWCWCWCWCWCWWFN 69
Score = 54.7 bits (130), Expect = 2e-06
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -1
Query: 462 GLG*ER*CWCWCWCWCWCW*W 400
G G R CWCWCWCWCWCW W
Sbjct: 30 GGGEGRGCWCWCWCWCWCWCW 50
Score = 53.5 bits (127), Expect = 4e-06
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 441 CWCWCWCWCWCW*W 400
CWCWCWCWCWCW W
Sbjct: 41 CWCWCWCWCWCWCW 54
Score = 53.5 bits (127), Expect = 4e-06
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 441 CWCWCWCWCWCW*W 400
CWCWCWCWCWCW W
Sbjct: 45 CWCWCWCWCWCWCW 58
Score = 53.5 bits (127), Expect = 4e-06
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 441 CWCWCWCWCWCW*W 400
CWCWCWCWCWCW W
Sbjct: 47 CWCWCWCWCWCWCW 60
Score = 53.5 bits (127), Expect = 4e-06
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 441 CWCWCWCWCWCW*W 400
CWCWCWCWCWCW W
Sbjct: 49 CWCWCWCWCWCWCW 62
Score = 53.5 bits (127), Expect = 4e-06
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 441 CWCWCWCWCWCW*W 400
CWCWCWCWCWCW W
Sbjct: 51 CWCWCWCWCWCWCW 64
Score = 53.5 bits (127), Expect = 4e-06
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 441 CWCWCWCWCWCW*W 400
CWCWCWCWCWCW W
Sbjct: 43 CWCWCWCWCWCWCW 56
Score = 53.5 bits (127), Expect = 4e-06
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 441 CWCWCWCWCWCW*W 400
CWCWCWCWCWCW W
Sbjct: 39 CWCWCWCWCWCWCW 52
>sp|P04929|HRPX_PLALO HISTIDINE-RICH GLYCOPROTEIN PRECURSOR gi|72400|pir||KGZQHL
histidine-rich glycoprotein precursor - Plasmodium
lophurae gi|9999|emb|CAA25698.1| histidine-rich protein
[Plasmodium lophurae] gi|224316|prf||1101401A
protein,His rich
Length = 351
Score = 56.6 bits (135), Expect = 4e-07
Identities = 25/82 (30%), Positives = 31/82 (37%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H+ HHHH H H H H HH H +P H HG+H H H
Sbjct: 177 HHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHH----HHHH 232
Query: 548 SEIHSGENRHGYSFFSFSHGDS 613
H + HG+ H D+
Sbjct: 233 GHHHHHHHHHGHHHHHHHHHDA 254
Score = 54.7 bits (130), Expect = 2e-06
Identities = 23/70 (32%), Positives = 26/70 (36%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H HHHH H H H H H HH H HG H +H D H H
Sbjct: 210 HHHAPHHHHHHHHGHHHHHHHHHGHH--------HHHHHHHGHHHHHHHHHDAHHHHHHH 261
Query: 548 SEIHSGENRH 577
+ H + H
Sbjct: 262 HDAHHHHHHH 271
Score = 53.5 bits (127), Expect = 4e-06
Identities = 22/78 (28%), Positives = 29/78 (36%)
Frame = +2
Query: 344 PKNEN*QEHKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDD 523
P + + H H HH H H H H H H HH + H H + H +H D
Sbjct: 214 PHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHD 273
Query: 524 GSQCHDHSSEIHSGENRH 577
H H + H + H
Sbjct: 274 AHHHHHHHHDAHHHHHHH 291
Score = 53.1 bits (126), Expect = 5e-06
Identities = 22/78 (28%), Positives = 28/78 (35%)
Frame = +2
Query: 344 PKNEN*QEHKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDD 523
P + + H H HH H H H H H H HH H H + H +H D
Sbjct: 204 PHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHD 263
Query: 524 GSQCHDHSSEIHSGENRH 577
H H + H + H
Sbjct: 264 AHHHHHHHHDAHHHHHHH 281
Score = 53.1 bits (126), Expect = 5e-06
Identities = 23/82 (28%), Positives = 30/82 (36%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H HHHH H H H H HH + H H + H +H D H H
Sbjct: 237 HHHHHHGHHHHHHHHHDAHHHHHHHH-----DAHHHHHHHHDAHHHHHHHHDAHHHHHHH 291
Query: 548 SEIHSGENRHGYSFFSFSHGDS 613
+ H + H + H D+
Sbjct: 292 HDAHHHHHHHHDAHHHHHHHDA 313
Score = 52.8 bits (125), Expect = 6e-06
Identities = 23/82 (28%), Positives = 29/82 (35%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H HHHH H H H H HH + H H + H +H D H H
Sbjct: 247 HHHHHHDAHHHHHHHHDAHHHHHHHH-----DAHHHHHHHHDAHHHHHHHHDAHHHHHHH 301
Query: 548 SEIHSGENRHGYSFFSFSHGDS 613
+ H + H H D+
Sbjct: 302 HDAHHHHHHHDAHHHHHHHHDA 323
Score = 52.0 bits (123), Expect = 1e-05
Identities = 21/70 (30%), Positives = 24/70 (34%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H HHHH H H H H HH H H H +H D H H
Sbjct: 267 HHHHHHDAHHHHHHHHDAHHHHHHHH------DAHHHHHHHHDAHHHHHHHDAHHHHHHH 320
Query: 548 SEIHSGENRH 577
+ H + H
Sbjct: 321 HDAHHHHHHH 330
Score = 51.6 bits (122), Expect = 1e-05
Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Frame = +2
Query: 362 QEHKARSHSQFHHHHQHQHQHQHQ----HQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGS 529
+EH H + HHHH H H H H H HHL H + H H +H +
Sbjct: 83 EEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEEHHHHHH--AA 140
Query: 530 QCHDHSSEIHSGENRHGYSFFSFSH 604
H H H H + +F H
Sbjct: 141 HHHHHEEHHHHHHAAHHHPWFHHHH 165
Score = 51.6 bits (122), Expect = 1e-05
Identities = 21/70 (30%), Positives = 25/70 (35%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H HHHH H H H H HH H H + H +H D H H
Sbjct: 277 HHHHHHDAHHHHHHHHDAHHHHHHHH------DAHHHHHHHDAHHHHHHHHDAHHHHHHH 330
Query: 548 SEIHSGENRH 577
+ H + H
Sbjct: 331 HDAHHHHHHH 340
Score = 51.2 bits (121), Expect = 2e-05
Identities = 23/82 (28%), Positives = 28/82 (34%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H HHHH H H H H HH + H H + H +H D H H
Sbjct: 257 HHHHHHDAHHHHHHHHDAHHHHHHHH-----DAHHHHHHHHDAHHHHHHHHDAHHHHHHH 311
Query: 548 SEIHSGENRHGYSFFSFSHGDS 613
H + H H D+
Sbjct: 312 DAHHHHHHHHDAHHHHHHHHDA 333
Score = 48.9 bits (115), Expect = 9e-05
Identities = 20/70 (28%), Positives = 25/70 (35%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H HHH H H H H HH + H H + H +H D H H
Sbjct: 281 HHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH 340
Query: 548 SEIHSGENRH 577
+ H + H
Sbjct: 341 HDAHHHHHHH 350
Score = 48.9 bits (115), Expect = 9e-05
Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Frame = +2
Query: 368 HKARSHSQFHHHHQ----HQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQC 535
H A H FHHHH H H H H HH H +P H H +H
Sbjct: 153 HAAHHHPWFHHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHH----HHHHHAPHHHH 208
Query: 536 HDHSSEIHSGENRHGYSFFSFSH 604
H H + H + HG+ H
Sbjct: 209 HHHHAPHHHHHHHHGHHHHHHHH 231
Score = 47.0 bits (110), Expect = 4e-04
Identities = 22/82 (26%), Positives = 27/82 (32%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H A H HH H H H H HH + H H + H +H D H H
Sbjct: 262 HDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHH 321
Query: 548 SEIHSGENRHGYSFFSFSHGDS 613
H + H H D+
Sbjct: 322 DAHHHHHHHHDAHHHHHHHHDA 343
Score = 46.2 bits (108), Expect = 6e-04
Identities = 23/87 (26%), Positives = 29/87 (32%)
Frame = +2
Query: 344 PKNEN*QEHKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDD 523
P +E H H + HH H H H H H HH H P H + H +H
Sbjct: 72 PHHEEHHHHHPEEHHEPHHEE-HHHHHPHPHHHH-------HHHPPHHHHHLGHHHHHHH 123
Query: 524 GSQCHDHSSEIHSGENRHGYSFFSFSH 604
+ H H H H + H
Sbjct: 124 AAHHHHHEEHHHHHHAAHHHHHEEHHH 150
Score = 44.7 bits (104), Expect = 0.002
Identities = 21/79 (26%), Positives = 27/79 (33%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H + HHHH +H H +HH H P EH H H ++ H H
Sbjct: 53 HPEHLHEEHHHHHPEEHHEPHHEEHH--------HHHPEEH----HEPHHEEHHHHHPHP 100
Query: 548 SEIHSGENRHGYSFFSFSH 604
H H + H
Sbjct: 101 HHHHHHHPPHHHHHLGHHH 119
Score = 44.7 bits (104), Expect = 0.002
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQH--QHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHD 541
H H HHHH H H H H HH H HG H +H H
Sbjct: 190 HHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHH 249
Query: 542 HSSEIHSGENRH 577
H + H + H
Sbjct: 250 HHHDAHHHHHHH 261
Score = 41.2 bits (95), Expect = 0.019
Identities = 20/83 (24%), Positives = 27/83 (32%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H H HHHH H H H HH + H + H + +H + H
Sbjct: 102 HHHHHHPPHHHHHLGHHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHHHHHHAAHHHPWF 161
Query: 548 SEIHSGENRHGYSFFSFSHGDSP 616
H G + H H +P
Sbjct: 162 HHHHLGYHHHHAPHHHHHHHHAP 184
Score = 40.8 bits (94), Expect = 0.025
Identities = 18/70 (25%), Positives = 25/70 (35%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHS 547
H A H HHH H H H H+ H + H H + + +H H H
Sbjct: 123 HAAHHHHHEEHHHHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHHHHHHHH 182
Query: 548 SEIHSGENRH 577
+ H + H
Sbjct: 183 APHHHHHHHH 192
Score = 39.3 bits (90), Expect = 0.073
Identities = 19/74 (25%), Positives = 24/74 (31%)
Frame = +2
Query: 383 HSQFHHHHQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDHGNHRDDGSQCHDHSSEIHS 562
H HHHH H H H H+ H + H EH H H H H
Sbjct: 113 HHLGHHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHH 172
Query: 563 GENRHGYSFFSFSH 604
+ H + + H
Sbjct: 173 APHHHHHHHHAPHH 186
Score = 38.5 bits (88), Expect = 0.12
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 368 HKARSHSQFHHHHQHQHQHQHQHQHH 445
H H HHHH H H H H HH
Sbjct: 326 HHHHHHDAHHHHHHHHDAHHHHHHHH 351
Score = 34.7 bits (78), Expect = 1.8
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -2
Query: 626 HSVKGNHHGRMRRMNNHDGFRHYESQRNGHGTGYRRHGGFHGQHSH 489
H +HHG ++H G H+ +GH + H H H H
Sbjct: 215 HHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHH 260
Score = 34.7 bits (78), Expect = 1.8
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -2
Query: 626 HSVKGNHHGRMRRMNNHDGFRHYESQRNGHGTGYRRHGGFHGQHSH 489
H +HH ++H G H+ +GH + H G H H H
Sbjct: 205 HHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHH 250
>ref|NP_444406.1| histidine-rich glycoprotein [Mus musculus]
gi|13358880|dbj|BAB33094.1| histidine-rich glycoprotein
[Mus musculus]
Length = 525
Score = 55.5 bits (132), Expect = 1e-06
Identities = 48/179 (26%), Positives = 65/179 (35%), Gaps = 18/179 (10%)
Frame = +2
Query: 329 KTQKTPKNEN*QEHKARSHSQFHHH-HQHQHQHQHQHQHHLS*PKPSGHFSPSEHGSVDH 505
+T + N + EH H HH H H H H HH P GH S H H
Sbjct: 323 RTHRPSYNHSCNEHPCHGHRPHGHHPHSHHPPGHHSHGHH-----PHGHHPHSHHSHGHH 377
Query: 506 -GNHRDDGSQCHDHSSEIH--SGENRHGYSFFSFSHGDSPSLSGLKNPQISVQLSPP--- 667
H G H H H G + HG+ F + D PS S Q PP
Sbjct: 378 PPGHHPHGHHPHGHHPHGHHPHGHHPHGHDFLDYGPCDPPSNSQELKGQYHRGYGPPHGH 437
Query: 668 ---------LLPNQHFSFRSNRFQWRFP--NLH*LLSVPPGSFFSSLHSDSHSQLNPQI 811
L P H + + +R P N+ +L++P +F S + + L P+I
Sbjct: 438 SRKRGPGKGLFPFHH---QQIGYVYRLPPLNIGEVLTLPEANFPSFSLPNCNRSLQPEI 493
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 800,530,573
Number of Sequences: 1393205
Number of extensions: 20464698
Number of successful extensions: 220610
Number of sequences better than 10.0: 1717
Number of HSP's better than 10.0 without gapping: 88476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169753
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 43758763209
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
