Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010332A_C01 KMC010332A_c01
(767 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566470.1| putative acetyltransferase; protein id: At3g139... 222 5e-57
gb|AAM12967.1| dihydrolipoamide acetyltransferase [Arabidopsis t... 220 2e-56
gb|AAK53067.1| mono-lipoyl E2 [Arabidopsis thaliana] 217 1e-55
ref|NP_564654.1| dihydrolipoamide S-acetyltransferase, putative;... 216 3e-55
gb|AAM97076.1| dihydrolipoamide S-acetyltransferase, putative [A... 216 3e-55
>ref|NP_566470.1| putative acetyltransferase; protein id: At3g13930.1, supported by
cDNA: gi_13605806, supported by cDNA: gi_20147146,
supported by cDNA: gi_20260137 [Arabidopsis thaliana]
gi|13605807|gb|AAK32889.1|AF367302_1 AT3g13930/MDC16_5
[Arabidopsis thaliana] gi|20147147|gb|AAM10290.1|
AT3g13930/MDC16_5 [Arabidopsis thaliana]
gi|23306388|gb|AAN17421.1| putative acetyltransferase
[Arabidopsis thaliana] gi|23397124|gb|AAN31846.1|
putative acetyltransferase [Arabidopsis thaliana]
gi|24899791|gb|AAN65110.1| putative acetyltransferase
[Arabidopsis thaliana]
Length = 539
Score = 222 bits (565), Expect = 5e-57
Identities = 120/216 (55%), Positives = 150/216 (68%), Gaps = 5/216 (2%)
Frame = +1
Query: 106 ASHLINHSRKLRNASIFLHHERALLVRWFCNDAQPSISRNRDVRRTQIHDYKSSTRSSVA 285
AS +INHS+KL++ S L + A+ VR F N PS+ D+ + +++ Y S R S
Sbjct: 2 ASRIINHSKKLKHVSALLRRDHAVAVRCFSNSTHPSLVGREDIFKARLN-YSSVERISKC 60
Query: 286 GTSPNFTKRNFSMSTMKRGC-ISGCLFNGDISNSRVMSRRCYASASDLPPHQEIGMPSLS 462
GT S ++ K ++G + +S++ S R ++S+SDLPPHQEIGMPSLS
Sbjct: 61 GTGNVTMLSGISTTSTKLSSPMAGPKLFKEFISSQMRSVRGFSSSSDLPPHQEIGMPSLS 120
Query: 463 PTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVRGDGDKEIQVG 642
PTMTEGNIARWLKKEGDKV+PGEVLCEVETDKATVEMECMEEG+LAKIV+ +G KEIQVG
Sbjct: 121 PTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIVKEEGAKEIQVG 180
Query: 643 EIIAITVEDEGDIAKFKDYQASA----SEPSCSPLP 738
E+IAITVEDE DI KFKDY S+ + P P P
Sbjct: 181 EVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAKPAP 216
>gb|AAM12967.1| dihydrolipoamide acetyltransferase [Arabidopsis thaliana]
Length = 539
Score = 220 bits (560), Expect = 2e-56
Identities = 119/216 (55%), Positives = 149/216 (68%), Gaps = 5/216 (2%)
Frame = +1
Query: 106 ASHLINHSRKLRNASIFLHHERALLVRWFCNDAQPSISRNRDVRRTQIHDYKSSTRSSVA 285
AS +INHS+KL++ S L + A+ VR F N PS+ D+ + +++ Y S R S
Sbjct: 2 ASRIINHSKKLKHVSALLRRDHAVAVRCFSNSTHPSLVGREDIFKARLN-YSSVERISKC 60
Query: 286 GTSPNFTKRNFSMSTMKRGC-ISGCLFNGDISNSRVMSRRCYASASDLPPHQEIGMPSLS 462
GT S ++ K ++G + +S++ S R ++S+SDLPPHQEIGMPSLS
Sbjct: 61 GTGNVTMLSGISTTSTKLSSPMAGPKLFKEFISSQMRSVRGFSSSSDLPPHQEIGMPSLS 120
Query: 463 PTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVRGDGDKEIQVG 642
PTM EGNIARWLKKEGDKV+PGEVLCEVETDKATVEMECMEEG+LAKIV+ +G KEIQVG
Sbjct: 121 PTMAEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIVKEEGAKEIQVG 180
Query: 643 EIIAITVEDEGDIAKFKDYQASA----SEPSCSPLP 738
E+IAITVEDE DI KFKDY S+ + P P P
Sbjct: 181 EVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAKPAP 216
>gb|AAK53067.1| mono-lipoyl E2 [Arabidopsis thaliana]
Length = 539
Score = 217 bits (553), Expect = 1e-55
Identities = 117/206 (56%), Positives = 143/206 (68%)
Frame = +1
Query: 97 MANASHLINHSRKLRNASIFLHHERALLVRWFCNDAQPSISRNRDVRRTQIHDYKSSTRS 276
MA AS +INHS+KL++ S L E A +R++ N + ++R D+ +++ Y R
Sbjct: 1 MAYASRIINHSKKLKDVSTLLRRENAATIRYYSNTNRAPLNRE-DIFNSRL-GYPPLERI 58
Query: 277 SVAGTSPNFTKRNFSMSTMKRGCISGCLFNGDISNSRVMSRRCYASASDLPPHQEIGMPS 456
S+ TS FS + G G + + S R ++S SDLPPHQEIGMPS
Sbjct: 59 SICSTSTLPVSIIFSTTRSNLSSAMGRPIFGKEFSCLMQSARGFSSGSDLPPHQEIGMPS 118
Query: 457 LSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVRGDGDKEIQ 636
LSPTMTEGNIARWLKKEGDKV+PGEVLCEVETDKATVEMECMEEGYLAKIV+ +G KEIQ
Sbjct: 119 LSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKAEGSKEIQ 178
Query: 637 VGEIIAITVEDEGDIAKFKDYQASAS 714
VGE+IAITVEDE DI KFKDY S++
Sbjct: 179 VGEVIAITVEDEEDIGKFKDYTPSST 204
>ref|NP_564654.1| dihydrolipoamide S-acetyltransferase, putative; protein id:
At1g54220.1, supported by cDNA: gi_14161721 [Arabidopsis
thaliana]
Length = 539
Score = 216 bits (550), Expect = 3e-55
Identities = 117/206 (56%), Positives = 142/206 (68%)
Frame = +1
Query: 97 MANASHLINHSRKLRNASIFLHHERALLVRWFCNDAQPSISRNRDVRRTQIHDYKSSTRS 276
MA AS +INHS+KL++ S L E A +R++ N + ++R D +++ Y R
Sbjct: 1 MAYASRIINHSKKLKDVSTLLRRENAATIRYYSNTNRAPLNRE-DTFNSRL-GYPPLERI 58
Query: 277 SVAGTSPNFTKRNFSMSTMKRGCISGCLFNGDISNSRVMSRRCYASASDLPPHQEIGMPS 456
S+ TS FS + G G + + S R ++S SDLPPHQEIGMPS
Sbjct: 59 SICSTSTLPVSIIFSTTRSNLSSAMGRPIFGKEFSCLMQSARGFSSGSDLPPHQEIGMPS 118
Query: 457 LSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVRGDGDKEIQ 636
LSPTMTEGNIARWLKKEGDKV+PGEVLCEVETDKATVEMECMEEGYLAKIV+ +G KEIQ
Sbjct: 119 LSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKAEGSKEIQ 178
Query: 637 VGEIIAITVEDEGDIAKFKDYQASAS 714
VGE+IAITVEDE DI KFKDY S++
Sbjct: 179 VGEVIAITVEDEEDIGKFKDYTPSST 204
>gb|AAM97076.1| dihydrolipoamide S-acetyltransferase, putative [Arabidopsis
thaliana]
Length = 539
Score = 216 bits (550), Expect = 3e-55
Identities = 117/206 (56%), Positives = 142/206 (68%)
Frame = +1
Query: 97 MANASHLINHSRKLRNASIFLHHERALLVRWFCNDAQPSISRNRDVRRTQIHDYKSSTRS 276
MA AS +INHS+KL++ S L E A +R++ N + ++R D +++ Y R
Sbjct: 1 MAYASRIINHSKKLKDVSTLLRRENAATIRYYSNTNRAPLNRE-DTFNSRL-GYPPLERI 58
Query: 277 SVAGTSPNFTKRNFSMSTMKRGCISGCLFNGDISNSRVMSRRCYASASDLPPHQEIGMPS 456
S+ TS FS + G G + + S R ++S SDLPPHQEIGMPS
Sbjct: 59 SICSTSTLPVSIIFSTTRSNLSSAMGRPIFGKEFSCLMQSARGFSSGSDLPPHQEIGMPS 118
Query: 457 LSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVRGDGDKEIQ 636
LSPTMTEGNIARWLKKEGDKV+PGEVLCEVETDKATVEMECMEEGYLAKIV+ +G KEIQ
Sbjct: 119 LSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKAEGSKEIQ 178
Query: 637 VGEIIAITVEDEGDIAKFKDYQASAS 714
VGE+IAITVEDE DI KFKDY S++
Sbjct: 179 VGEVIAITVEDEEDIGKFKDYTPSST 204
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 719,911,351
Number of Sequences: 1393205
Number of extensions: 16517343
Number of successful extensions: 47902
Number of sequences better than 10.0: 545
Number of HSP's better than 10.0 without gapping: 44817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47747
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 37534933228
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
