Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010326A_C01 KMC010326A_c01
(525 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T05949 phosphatidylinositol-phosphatidylcholine transfer pr... 114 7e-25
ref|NP_199584.1| putative protein; protein id: At5g47730.1 [Arab... 94 1e-18
ref|NP_175980.1| polyphosphoinositide binding protein, putative;... 75 4e-13
pir||G96599 protein F14J16.8 [imported] - Arabidopsis thaliana g... 75 4e-13
ref|NP_779212.1| conserved hypothetical protein [Xylella fastidi... 31 7.7
>pir||T05949 phosphatidylinositol-phosphatidylcholine transfer protein SEC14
homolog Ssh1 - soybean gi|2739044|gb|AAB94598.1|
polyphosphoinositide binding protein Ssh1p [Glycine max]
Length = 324
Score = 114 bits (285), Expect = 7e-25
Identities = 52/67 (77%), Positives = 58/67 (85%)
Frame = -3
Query: 523 SENCYSLDHSFHQELYNYIKEQSRIHEAVEPIKQGSFHVAFPEPPAEEANIAKTIESELH 344
SENCYSLDH FHQELYN+IK+Q+R+ EAVEPIKQGSFHV FP PP +E IAKTIESELH
Sbjct: 257 SENCYSLDHPFHQELYNHIKQQARLREAVEPIKQGSFHVDFPVPPDDEVEIAKTIESELH 316
Query: 343 KFEKSHG 323
KFE +G
Sbjct: 317 KFENGNG 323
>ref|NP_199584.1| putative protein; protein id: At5g47730.1 [Arabidopsis thaliana]
gi|10177909|dbj|BAB11320.1|
gene_id:MCA23.5~pir||T05949~strong similarity to unknown
protein [Arabidopsis thaliana]
Length = 341
Score = 93.6 bits (231), Expect = 1e-18
Identities = 42/67 (62%), Positives = 48/67 (70%)
Frame = -3
Query: 523 SENCYSLDHSFHQELYNYIKEQSRIHEAVEPIKQGSFHVAFPEPPAEEANIAKTIESELH 344
S NC+S++H FHQ+LYNY+K EP KQGSFHV FPEP AE IAKTIESELH
Sbjct: 255 SANCFSINHPFHQQLYNYVKHHYETQGQAEPAKQGSFHVGFPEPEAERCVIAKTIESELH 314
Query: 343 KFEKSHG 323
KFE +G
Sbjct: 315 KFENRNG 321
>ref|NP_175980.1| polyphosphoinositide binding protein, putative; protein id:
At1g55840.1, supported by cDNA: gi_16930446, supported
by cDNA: gi_19310516 [Arabidopsis thaliana]
gi|16930447|gb|AAL31909.1|AF419577_1 At1g55840/F14J16_2
[Arabidopsis thaliana] gi|19310517|gb|AAL84992.1|
At1g55840/F14J16_2 [Arabidopsis thaliana]
Length = 325
Score = 75.5 bits (184), Expect = 4e-13
Identities = 34/70 (48%), Positives = 47/70 (66%)
Frame = -3
Query: 520 ENCYSLDHSFHQELYNYIKEQSRIHEAVEPIKQGSFHVAFPEPPAEEANIAKTIESELHK 341
+NC+SLDHSFHQ+LY+Y+K+Q+ + + PI+ GS HV FPEP E I T+E+E K
Sbjct: 259 DNCFSLDHSFHQDLYDYVKQQALVKGSGAPIRHGSVHVKFPEPDTEGNKIFDTLENEFQK 318
Query: 340 FEKSHGNDDR 311
GND +
Sbjct: 319 L----GNDQK 324
>pir||G96599 protein F14J16.8 [imported] - Arabidopsis thaliana
gi|8778303|gb|AAF79312.1|AC002304_5 F14J16.8
[Arabidopsis thaliana]
Length = 344
Score = 75.5 bits (184), Expect = 4e-13
Identities = 34/70 (48%), Positives = 47/70 (66%)
Frame = -3
Query: 520 ENCYSLDHSFHQELYNYIKEQSRIHEAVEPIKQGSFHVAFPEPPAEEANIAKTIESELHK 341
+NC+SLDHSFHQ+LY+Y+K+Q+ + + PI+ GS HV FPEP E I T+E+E K
Sbjct: 278 DNCFSLDHSFHQDLYDYVKQQALVKGSGAPIRHGSVHVKFPEPDTEGNKIFDTLENEFQK 337
Query: 340 FEKSHGNDDR 311
GND +
Sbjct: 338 L----GNDQK 343
>ref|NP_779212.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|28056996|gb|AAO28861.1| conserved hypothetical
protein [Xylella fastidiosa Temecula1]
Length = 301
Score = 31.2 bits (69), Expect = 7.7
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 309 HRSSFPWLFSNLCSSDSIVFAMFASSAGGSGK 404
H++ P + S+LCS +S+VFA ++ G +GK
Sbjct: 159 HQTPDPIISSSLCSEESLVFAEDGNATGSTGK 190
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 423,189,469
Number of Sequences: 1393205
Number of extensions: 8468140
Number of successful extensions: 22257
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22251
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
