Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010282A_C01 KMC010282A_c01
(567 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_173747.1| T76725 come from this gene.; protein id: At1g23... 176 2e-43
dbj|BAC42608.1| unknown protein [Arabidopsis thaliana] gi|289507... 176 2e-43
ref|NP_172544.1| putative lipase; protein id: At1g10740.1, suppo... 168 5e-41
gb|AAF17667.1|AC009398_16 F20B24.17 [Arabidopsis thaliana] 92 4e-18
ref|NP_571993.1| unknown [Rana tigrina ranavirus] gi|18656496|gb... 36 0.38
>ref|NP_173747.1| T76725 come from this gene.; protein id: At1g23330.1 [Arabidopsis
thaliana] gi|25402980|pir||D86367 protein F26F24.20
[imported] - Arabidopsis thaliana
gi|9295706|gb|AAF87012.1|AC005292_21 F26F24.20
[Arabidopsis thaliana]
Length = 471
Score = 176 bits (446), Expect = 2e-43
Identities = 78/96 (81%), Positives = 84/96 (87%)
Frame = -1
Query: 567 DEDWQDNDGALNTISMTHPRFPIEHPSLLVEKDSDCQPLQPGIWYYKFVEGDHVLFIINR 388
DEDWQDNDGALNTISMTHPR P+EH SL++ DSDC PLQPGIWYYK VE DH++FIINR
Sbjct: 368 DEDWQDNDGALNTISMTHPRIPVEHSSLILRSDSDCLPLQPGIWYYKIVEADHIMFIINR 427
Query: 387 ERAGVQFDLIYDSIFERCRKHVFRKKLPTLPNEVHH 280
ERAGV+FDLIYDSIFERCRKHVFRK TLPNE H
Sbjct: 428 ERAGVEFDLIYDSIFERCRKHVFRKAPQTLPNEAQH 463
>dbj|BAC42608.1| unknown protein [Arabidopsis thaliana] gi|28950783|gb|AAO63315.1|
At1g23330 [Arabidopsis thaliana]
Length = 231
Score = 176 bits (446), Expect = 2e-43
Identities = 78/96 (81%), Positives = 84/96 (87%)
Frame = -1
Query: 567 DEDWQDNDGALNTISMTHPRFPIEHPSLLVEKDSDCQPLQPGIWYYKFVEGDHVLFIINR 388
DEDWQDNDGALNTISMTHPR P+EH SL++ DSDC PLQPGIWYYK VE DH++FIINR
Sbjct: 128 DEDWQDNDGALNTISMTHPRIPVEHSSLILRSDSDCLPLQPGIWYYKIVEADHIMFIINR 187
Query: 387 ERAGVQFDLIYDSIFERCRKHVFRKKLPTLPNEVHH 280
ERAGV+FDLIYDSIFERCRKHVFRK TLPNE H
Sbjct: 188 ERAGVEFDLIYDSIFERCRKHVFRKAPQTLPNEAQH 223
>ref|NP_172544.1| putative lipase; protein id: At1g10740.1, supported by cDNA:
gi_13448929 [Arabidopsis thaliana]
gi|25402616|pir||H86240 hypothetical protein [imported]
- Arabidopsis thaliana
gi|4874274|gb|AAD31339.1|AC007354_12 Similar to
gb|X02844 lipase precursor from Staphylococcus hyicus.
ESTs gb|AI239406 and gb|T76725 come from this gene.
[Arabidopsis thaliana]
gi|13448930|gb|AAK27239.1|AF361099_1 putative lipase
[Arabidopsis thaliana] gi|21539509|gb|AAM53307.1|
putative lipase [Arabidopsis thaliana]
Length = 473
Score = 168 bits (425), Expect = 5e-41
Identities = 73/93 (78%), Positives = 82/93 (87%)
Frame = -1
Query: 567 DEDWQDNDGALNTISMTHPRFPIEHPSLLVEKDSDCQPLQPGIWYYKFVEGDHVLFIINR 388
DEDWQ+NDGALNTISMTHPR P+EHPS + DS+CQ LQPGIWYYK VE DH++FI+NR
Sbjct: 363 DEDWQENDGALNTISMTHPRLPVEHPSRFIRSDSECQTLQPGIWYYKIVEADHIMFIVNR 422
Query: 387 ERAGVQFDLIYDSIFERCRKHVFRKKLPTLPNE 289
ERAGVQFDLIYDSIF+RCRKHVFRK TLPN+
Sbjct: 423 ERAGVQFDLIYDSIFQRCRKHVFRKIPQTLPNQ 455
>gb|AAF17667.1|AC009398_16 F20B24.17 [Arabidopsis thaliana]
Length = 404
Score = 92.0 bits (227), Expect = 4e-18
Identities = 42/59 (71%), Positives = 47/59 (79%)
Frame = -1
Query: 465 DCQPLQPGIWYYKFVEGDHVLFIINRERAGVQFDLIYDSIFERCRKHVFRKKLPTLPNE 289
D P G YYK VE DH++FI+NRERAGVQFDLIYDSIF+RCRKHVFRK TLPN+
Sbjct: 328 DVSPPYKGYRYYKIVEADHIMFIVNRERAGVQFDLIYDSIFQRCRKHVFRKIPQTLPNQ 386
>ref|NP_571993.1| unknown [Rana tigrina ranavirus]
gi|18656496|gb|AAL77797.1|AF389451_4 unknown [Rana
tigrina ranavirus]
Length = 259
Score = 35.8 bits (81), Expect = 0.38
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -1
Query: 510 RFPIEHPSLLVEKDSDCQPLQPGIWYYKFVEGDHVLFIINRERAGVQFDLIYDSIF 343
R P +P LL K++ P Q +YKFV G V + +E+ V DL DSIF
Sbjct: 139 RAPALYPKLLKSKNN---PGQVATGFYKFVRGKEVKIPVVKEKCRVLCDLAIDSIF 191
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 472,727,339
Number of Sequences: 1393205
Number of extensions: 10093210
Number of successful extensions: 24861
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 24327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24860
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
