Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010252A_C01 KMC010252A_c01
(657 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06242 aspartate kinase (EC 2.7.2.4) / homoserine dehydroge... 124 1e-27
pir||T06246 aspartate kinase (EC 2.7.2.4) / homoserine dehydroge... 124 1e-27
sp|P37142|AKH_DAUCA Bifunctional aspartokinase/homoserine dehydr... 103 2e-21
ref|NP_193706.1| aspartate kinase-homoserine dehydrogenase - lik... 95 9e-19
gb|AAF24602.1|AC007654_18 T19E23.1 [Arabidopsis thaliana] 94 1e-18
>pir||T06242 aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase (EC
1.1.1.3) precursor - soybean chloroplast
gi|2970447|gb|AAC05981.1| aspartokinase-homoserine
dehydrogenase [Glycine max]
Length = 916
Score = 124 bits (311), Expect = 1e-27
Identities = 61/84 (72%), Positives = 71/84 (83%)
Frame = -2
Query: 602 LRRLTFKLPAVQSYFGANVLHPHTIIHVMQYGIPILIRNIFNLSASGTKIRHPSVNDSED 423
L+ L+++ SYFGANVLHP TII VM+YGIPI+IRNIFNLSA GTKI HPSVND ED
Sbjct: 331 LKTLSYQEAWEMSYFGANVLHPRTIIPVMRYGIPIMIRNIFNLSAPGTKICHPSVNDHED 390
Query: 422 MMNLKSFVEGFATIDNLALINVEG 351
NL++FV+GFATIDNLAL+NVEG
Sbjct: 391 SQNLQNFVKGFATIDNLALVNVEG 414
>pir||T06246 aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase (EC
1.1.1.3) precursor - soybean (fragment)
gi|2970556|gb|AAC05983.1| aspartokinase-homoserine
dehydrogenase [Glycine max]
Length = 909
Score = 124 bits (311), Expect = 1e-27
Identities = 61/84 (72%), Positives = 71/84 (83%)
Frame = -2
Query: 602 LRRLTFKLPAVQSYFGANVLHPHTIIHVMQYGIPILIRNIFNLSASGTKIRHPSVNDSED 423
L+ L+++ SYFGANVLHP TII VM+YGIPI+IRNIFNLSA GTKI HPSVND ED
Sbjct: 331 LKTLSYQEAWEMSYFGANVLHPRTIIPVMRYGIPIMIRNIFNLSAPGTKICHPSVNDHED 390
Query: 422 MMNLKSFVEGFATIDNLALINVEG 351
NL++FV+GFATIDNLAL+NVEG
Sbjct: 391 RQNLQNFVKGFATIDNLALVNVEG 414
>sp|P37142|AKH_DAUCA Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast
precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase ;
Homoserine dehydrogenase ] gi|486738|pir||S35160
aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase
(EC 1.1.1.3) precursor - carrot gi|464225|gb|AAA16972.1|
aspartokinase-homoserine dehydrogenase
Length = 921
Score = 103 bits (257), Expect = 2e-21
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = -2
Query: 602 LRRLTFKLPAVQSYFGANVLHPHTIIHVMQYGIPILIRNIFNLSASGTKIRHPSVNDSED 423
L+ L+++ SYFGANVLHP TI VM+Y IPI+IRNIFNLSA GT I SV ++ED
Sbjct: 336 LKTLSYQEAWEMSYFGANVLHPRTINPVMRYDIPIVIRNIFNLSAPGTMICRESVGETED 395
Query: 422 MMNLKSFVEGFATIDNLALINVEG 351
+ L+S V+GFATIDNLALINVEG
Sbjct: 396 GLKLESHVKGFATIDNLALINVEG 419
>ref|NP_193706.1| aspartate kinase-homoserine dehydrogenase - like protein; protein
id: At4g19710.1 [Arabidopsis thaliana]
gi|7434564|pir||T04752 aspartate kinase (EC 2.7.2.4) /
homoserine dehydrogenase (EC 1.1.1.3) T16H5.70 -
Arabidopsis thaliana gi|3250680|emb|CAA19688.1|
aspartate kinase-homoserine dehydrogenase-like protein
[Arabidopsis thaliana] gi|7268767|emb|CAB78973.1|
aspartate kinase-homoserine dehydrogenase-like protein
[Arabidopsis thaliana]
Length = 916
Score = 94.7 bits (234), Expect = 9e-19
Identities = 52/84 (61%), Positives = 63/84 (74%)
Frame = -2
Query: 602 LRRLTFKLPAVQSYFGANVLHPHTIIHVMQYGIPILIRNIFNLSASGTKIRHPSVNDSED 423
L+ L+++ SYFGANVLHP TII VM+Y IPI+IRNIFNLSA GT I P +D +
Sbjct: 333 LQTLSYQEAWEMSYFGANVLHPRTIIPVMRYNIPIVIRNIFNLSAPGTIICQPPEDDYD- 391
Query: 422 MMNLKSFVEGFATIDNLALINVEG 351
+ L + V+GFATIDNLALINVEG
Sbjct: 392 -LKLTTPVKGFATIDNLALINVEG 414
>gb|AAF24602.1|AC007654_18 T19E23.1 [Arabidopsis thaliana]
Length = 735
Score = 94.4 bits (233), Expect = 1e-18
Identities = 52/84 (61%), Positives = 61/84 (71%)
Frame = -2
Query: 602 LRRLTFKLPAVQSYFGANVLHPHTIIHVMQYGIPILIRNIFNLSASGTKIRHPSVNDSED 423
L+ L+++ SYFGANVLHP TII VM+Y IPI+IRNIFNLSA GT I D ED
Sbjct: 328 LKTLSYQEAWEMSYFGANVLHPRTIIPVMKYDIPIVIRNIFNLSAPGTMICRQI--DDED 385
Query: 422 MMNLKSFVEGFATIDNLALINVEG 351
L + V+GFATIDNLAL+NVEG
Sbjct: 386 GFKLDAPVKGFATIDNLALVNVEG 409
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 546,398,341
Number of Sequences: 1393205
Number of extensions: 11122207
Number of successful extensions: 23444
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 22756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23424
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28006887348
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
