Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010234A_C01 KMC010234A_c01
(381 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA92602.1| KIAA1364 protein [Homo sapiens] 33 1.1
ref|NP_055447.1| KIAA0750 gene product [Homo sapiens] gi|3882221... 32 1.5
dbj|BAC65779.1| mKIAA1364 protein [Mus musculus] 32 2.6
dbj|BAC33271.1| unnamed protein product [Mus musculus] 32 2.6
ref|NP_700445.1| RIKEN cDNA C130040D16; MICAL-3 [Mus musculus] g... 32 2.6
>dbj|BAA92602.1| KIAA1364 protein [Homo sapiens]
Length = 811
Score = 32.7 bits (73), Expect = 1.1
Identities = 18/63 (28%), Positives = 35/63 (54%), Gaps = 2/63 (3%)
Frame = +2
Query: 128 YFFLSSGAKSIVCKAYYLHPYIQSAEFARRQNVDQYSCRAYSLTSA--ANGATLVSLNFS 301
YF +++ +S++ K LH Y + R+NVDQ + +Y+ +A + L SL+F+
Sbjct: 133 YFVMTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFA 192
Query: 302 LQN 310
+ +
Sbjct: 193 INH 195
>ref|NP_055447.1| KIAA0750 gene product [Homo sapiens] gi|3882221|dbj|BAA34470.1|
KIAA0750 protein [Homo sapiens]
gi|27882557|gb|AAH44577.1| KIAA0750 gene product [Homo
sapiens]
Length = 1124
Score = 32.3 bits (72), Expect = 1.5
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 92 LQNAMISNFCRGYFFLSSGAKSIVCKAYYLHPYIQSAEFARRQNVDQYSCRAYSLTSA-- 265
L+N + C YF +++ +S++ K ++ YI + +NV+Q + +Y+ +A
Sbjct: 286 LENIVYYKDCTHYFVMTAKKQSLLDKGVIINDYIDTEMLLCAENVNQDNLLSYAREAADF 345
Query: 266 ANGATLVSLNFSLQN 310
A L SL+F++ +
Sbjct: 346 ATNYQLPSLDFAMNH 360
>dbj|BAC65779.1| mKIAA1364 protein [Mus musculus]
Length = 776
Score = 31.6 bits (70), Expect = 2.6
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 128 YFFLSSGAKSIVCKAYYLHPYIQSAEFARRQNVDQYSCRAYSLTSA--ANGATLVSLNFS 301
YF +++ +S++ K LH Y + R+NVDQ + Y+ +A + L SL+F+
Sbjct: 300 YFVMTAKKQSLLDKGVILHDYTDTELLLSRENVDQEALLNYAREAADFSTQQQLPSLDFA 359
Query: 302 LQN 310
+ +
Sbjct: 360 INH 362
>dbj|BAC33271.1| unnamed protein product [Mus musculus]
Length = 695
Score = 31.6 bits (70), Expect = 2.6
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 128 YFFLSSGAKSIVCKAYYLHPYIQSAEFARRQNVDQYSCRAYSLTSA--ANGATLVSLNFS 301
YF +++ +S++ K LH Y + R+NVDQ + Y+ +A + L SL+F+
Sbjct: 298 YFVMTAKKQSLLDKGVILHDYTDTELLLSRENVDQEALLNYAREAADFSTQQQLPSLDFA 357
Query: 302 LQN 310
+ +
Sbjct: 358 INH 360
>ref|NP_700445.1| RIKEN cDNA C130040D16; MICAL-3 [Mus musculus]
gi|22770776|gb|AAN06715.1| MICAL-3 [Mus musculus]
Length = 864
Score = 31.6 bits (70), Expect = 2.6
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 128 YFFLSSGAKSIVCKAYYLHPYIQSAEFARRQNVDQYSCRAYSLTSA--ANGATLVSLNFS 301
YF +++ +S++ K LH Y + R+NVDQ + Y+ +A + L SL+F+
Sbjct: 298 YFVMTAKKQSLLDKGVILHDYTDTELLLSRENVDQEALLNYAREAADFSTQQQLPSLDFA 357
Query: 302 LQN 310
+ +
Sbjct: 358 INH 360
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 299,534,032
Number of Sequences: 1393205
Number of extensions: 5380262
Number of successful extensions: 11006
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11003
length of database: 448,689,247
effective HSP length: 102
effective length of database: 306,582,337
effective search space used: 7357976088
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
