Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010201A_C01 KMC010201A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF31705.1|AF221856_1 heat-shock protein 80 [Euphorbia esula] 204 7e-52
gb|AAN31859.1| putative heat shock protein 81-2 (HSP81-2) [Arabi... 199 2e-50
gb|AAN77149.1| fiber protein Fb9 [Gossypium barbadense] 198 4e-50
sp|P36181|HS80_LYCES HEAT SHOCK COGNATE PROTEIN 80 gi|7441893|pi... 197 7e-50
ref|NP_200414.1| HEAT SHOCK PROTEIN 81-2 (HSP81-2) (sp|P55737); ... 197 9e-50
>gb|AAF31705.1|AF221856_1 heat-shock protein 80 [Euphorbia esula]
Length = 320
Score = 204 bits (518), Expect = 7e-52
Identities = 101/112 (90%), Positives = 106/112 (94%)
Frame = -1
Query: 534 QXLRDSSMXGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETAMLTSGF 355
Q LRDSSM GYMSSKKTMEINPENPIM+ELRKRADADKNDKSVKDLVLLLFETA+LTSGF
Sbjct: 209 QALRDSSMAGYMSSKKTMEINPENPIMDELRKRADADKNDKSVKDLVLLLFETALLTSGF 268
Query: 354 SLDEPNTFGNRIHRMLKLGLSIDDDAAEADADMPPLEDVDADAEGSKMEEVD 199
SLD+PNTFGNRIHRMLKLGLSID+DA E DADMP LE+ DADAEGSKMEEVD
Sbjct: 269 SLDDPNTFGNRIHRMLKLGLSIDEDAGEGDADMPALEEADADAEGSKMEEVD 320
>gb|AAN31859.1| putative heat shock protein 81-2 (HSP81-2) [Arabidopsis thaliana]
Length = 699
Score = 199 bits (505), Expect = 2e-50
Identities = 104/113 (92%), Positives = 107/113 (94%), Gaps = 1/113 (0%)
Frame = -1
Query: 534 QXLRDSSMXGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETAMLTSGF 355
Q LRDSSM GYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKDLVLLLFETA+LTSGF
Sbjct: 588 QALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGF 647
Query: 354 SLDEPNTFGNRIHRMLKLGLSI-DDDAAEADADMPPLEDVDADAEGSKMEEVD 199
SLDEPNTFGNRIHRMLKLGLSI DDDA EADA+MPPLED DADAEGSKMEEVD
Sbjct: 648 SLDEPNTFGNRIHRMLKLGLSIDDDDAVEADAEMPPLED-DADAEGSKMEEVD 699
>gb|AAN77149.1| fiber protein Fb9 [Gossypium barbadense]
Length = 176
Score = 198 bits (503), Expect = 4e-50
Identities = 103/114 (90%), Positives = 108/114 (94%), Gaps = 2/114 (1%)
Frame = -1
Query: 534 QXLRDSSMXGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETAMLTSGF 355
Q LRD+SM GYMSSKKTMEINP+NPIMEELRKRADADKNDKSVKDLVLLLFETA+LTSGF
Sbjct: 65 QALRDNSMAGYMSSKKTMEINPDNPIMEELRKRADADKNDKSVKDLVLLLFETALLTSGF 124
Query: 354 SLDEPNTFGNRIHRMLKLGLSIDDDA--AEADADMPPLEDVDADAEGSKMEEVD 199
SLD+PNTFGNRIHRMLKLGLSID+DA AEADADMPPLE DADAEGSKMEEVD
Sbjct: 125 SLDDPNTFGNRIHRMLKLGLSIDEDAGEAEADADMPPLE--DADAEGSKMEEVD 176
>sp|P36181|HS80_LYCES HEAT SHOCK COGNATE PROTEIN 80 gi|7441893|pir||T07037 heat shock
protein 80 - tomato gi|170456|gb|AAB01376.1| heat shock
cognate protein 80 gi|445601|prf||1909348A heat shock
protein hsp80
Length = 699
Score = 197 bits (501), Expect = 7e-50
Identities = 98/112 (87%), Positives = 106/112 (94%)
Frame = -1
Query: 534 QXLRDSSMXGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETAMLTSGF 355
Q LRDSSM GYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKDLVLLLFETA+LTSGF
Sbjct: 588 QALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGF 647
Query: 354 SLDEPNTFGNRIHRMLKLGLSIDDDAAEADADMPPLEDVDADAEGSKMEEVD 199
SL+EPNTFGNRIHRMLKLGLSID+++ +ADADMP LED +ADAEGSKMEEVD
Sbjct: 648 SLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD 699
>ref|NP_200414.1| HEAT SHOCK PROTEIN 81-2 (HSP81-2) (sp|P55737); protein id:
At5g56030.1, supported by cDNA: gi_17065347 [Arabidopsis
thaliana] gi|2495365|sp|P55737|HS82_ARATH Heat shock
protein 81-2 (HSP81-2) gi|9758623|dbj|BAB09285.1| HEAT
SHOCK PROTEIN 81-2 (HSP81-2) [Arabidopsis thaliana]
gi|17065348|gb|AAL32828.1| HEAT SHOCK PROTEIN 81-2
(HSP81-2) [Arabidopsis thaliana]
gi|22136254|gb|AAM91205.1| heat shock protein 81-2
[Arabidopsis thaliana] gi|25054933|gb|AAN71943.1|
putative heat-shock protein HSP81-2 [Arabidopsis
thaliana] gi|27311859|gb|AAO00895.1| Unknown protein
[Arabidopsis thaliana] gi|445127|prf||1908431B heat
shock protein HSP81-2
Length = 699
Score = 197 bits (500), Expect = 9e-50
Identities = 103/113 (91%), Positives = 107/113 (94%), Gaps = 1/113 (0%)
Frame = -1
Query: 534 QXLRDSSMXGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETAMLTSGF 355
Q LRDSSM GYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKDLVLLLFETA+LTSGF
Sbjct: 588 QALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGF 647
Query: 354 SLDEPNTFGNRIHRMLKLGLSI-DDDAAEADADMPPLEDVDADAEGSKMEEVD 199
SLDEPNTFG+RIHRMLKLGLSI DDDA EADA+MPPLED DADAEGSKMEEVD
Sbjct: 648 SLDEPNTFGSRIHRMLKLGLSIDDDDAVEADAEMPPLED-DADAEGSKMEEVD 699
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 432,392,423
Number of Sequences: 1393205
Number of extensions: 9056871
Number of successful extensions: 49206
Number of sequences better than 10.0: 364
Number of HSP's better than 10.0 without gapping: 38367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44925
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
