Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010180A_C01 KMC010180A_c01
(493 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO22781.1| putative arginine methyltransferase [Arabidopsis ... 34 1.00
ref|NP_199713.1| arginine methyltransferase-like protein; protei... 34 1.00
ref|NP_187349.1| putative arginine methyltransferase; protein id... 32 2.9
ref|XP_164457.1| hypothetical protein XP_164457 [Mus musculus] 32 4.9
>gb|AAO22781.1| putative arginine methyltransferase [Arabidopsis thaliana]
Length = 435
Score = 33.9 bits (76), Expect = 1.00
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = -3
Query: 491 YAVNQDQ---QPQPFIQTQDVHIKSQDLDETEMMQQPSPNSCAQI 366
Y ++Q Q +P Q+QD+HI S DL+E E++QQ N+ AQ+
Sbjct: 394 YRMSQPQVYPTQEPPAQSQDIHIHSDDLEELELLQQ---NANAQL 435
>ref|NP_199713.1| arginine methyltransferase-like protein; protein id: At5g49020.1
[Arabidopsis thaliana] gi|10177192|dbj|BAB10326.1|
arginine methyltransferase-like protein [Arabidopsis
thaliana]
Length = 577
Score = 33.9 bits (76), Expect = 1.00
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = -3
Query: 491 YAVNQDQ---QPQPFIQTQDVHIKSQDLDETEMMQQPSPNSCAQI 366
Y ++Q Q +P Q+QD+HI S DL+E E++QQ N+ AQ+
Sbjct: 536 YRMSQPQVYPTQEPPAQSQDIHIHSDDLEELELLQQ---NANAQL 577
>ref|NP_187349.1| putative arginine methyltransferase; protein id: At3g06930.1
[Arabidopsis thaliana]
gi|6729000|gb|AAF26997.1|AC016827_8 putative arginine
methyltransferase [Arabidopsis thaliana]
Length = 388
Score = 32.3 bits (72), Expect = 2.9
Identities = 18/44 (40%), Positives = 27/44 (60%), Gaps = 2/44 (4%)
Frame = -3
Query: 491 YAVNQDQ--QPQPFIQTQDVHIKSQDLDETEMMQQPSPNSCAQI 366
Y V Q+ QPQP + TQD+ + +L+E E++QQ N AQ+
Sbjct: 346 YPVAQEPPLQPQPELSTQDIQTPNDELEE-ELLQQLPQNPSAQL 388
>ref|XP_164457.1| hypothetical protein XP_164457 [Mus musculus]
Length = 974
Score = 31.6 bits (70), Expect = 4.9
Identities = 30/122 (24%), Positives = 53/122 (42%), Gaps = 5/122 (4%)
Frame = +1
Query: 67 DFSPFLLGCD*HYYTHNSIFKTCIRIQYIAS*NTMRSNTEASPLTTIDIECNDEFTSMRL 246
D SPFLL + TH C+R + + + L ++++ + T+ RL
Sbjct: 39 DLSPFLLPLEQQLMTHRPFILECVRPPASTYPAHQVALWKCAALLVMEMQASILATTPRL 98
Query: 247 SGL-----SK*RHAFPN*LIHVTNRKLNKSKFFYQSYIYSA*SESI*AHELGEGCCIISV 411
S L S+ +HAF + N K +S++ ++ SA + + G+ C IS+
Sbjct: 99 SSLEPRFASQIKHAF-GVKVKDANPKPYRSRYICFGFVRSAEGRGVHSMVKGQTTCHISL 157
Query: 412 SS 417
S
Sbjct: 158 PS 159
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 367,378,720
Number of Sequences: 1393205
Number of extensions: 6734929
Number of successful extensions: 13118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13115
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14203329973
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
