Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010165A_C01 KMC010165A_c01
(1094 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566410.1| expressed protein; protein id: At3g12050.1, sup... 246 6e-64
gb|AAM53279.1| unknown protein [Arabidopsis thaliana] gi|2319767... 246 6e-64
ref|NP_473204.2| hypothetical protein, conserved [Plasmodium fal... 79 1e-13
ref|NP_666148.1| cDNA sequence BC023857; hypothetical protein MG... 75 2e-12
ref|NP_610121.2| CG1416-PA [Drosophila melanogaster] gi|24585722... 74 5e-12
>ref|NP_566410.1| expressed protein; protein id: At3g12050.1, supported by cDNA: 38478.
[Arabidopsis thaliana] gi|10998146|dbj|BAB03117.1|
gene_id:MEC18.18~unknown protein [Arabidopsis thaliana]
gi|12322021|gb|AAG51059.1|AC069473_21 unknown protein;
42843-40829 [Arabidopsis thaliana]
gi|21593383|gb|AAM65332.1| unknown [Arabidopsis thaliana]
Length = 360
Score = 246 bits (627), Expect = 6e-64
Identities = 113/143 (79%), Positives = 131/143 (91%)
Frame = -2
Query: 1078 EVKKGVKSIRLTERFNCRARDLYEILMDENRWKGFTQSNARINKEVGGDFSIFDGSVTGT 899
+ K+G K+I +TE+FNCRARDLYEILMDENRWKGFTQSNA+I+K+V G S+FDGSVTG
Sbjct: 218 KTKEGFKTITMTEKFNCRARDLYEILMDENRWKGFTQSNAKISKDVNGPISVFDGSVTGM 277
Query: 898 NLELKEAKLIVQRWRFGSWNDGVVSTVRLVFEEPEPGVTVVKLTHSDVPEEDRYGNATVV 719
NLEL+E KLIVQ+WRFGSW DG+ STV++VFEEP+PGVT+V LTH+DVPEEDRYGNATVV
Sbjct: 278 NLELEEGKLIVQKWRFGSWPDGLDSTVKIVFEEPQPGVTIVNLTHTDVPEEDRYGNATVV 337
Query: 718 ENTERGWKDLIFQRIRAVFGFGI 650
ENTERGW+DLIF RIRAVFGFGI
Sbjct: 338 ENTERGWRDLIFHRIRAVFGFGI 360
>gb|AAM53279.1| unknown protein [Arabidopsis thaliana] gi|23197674|gb|AAN15364.1|
unknown protein [Arabidopsis thaliana]
Length = 360
Score = 246 bits (627), Expect = 6e-64
Identities = 113/143 (79%), Positives = 131/143 (91%)
Frame = -2
Query: 1078 EVKKGVKSIRLTERFNCRARDLYEILMDENRWKGFTQSNARINKEVGGDFSIFDGSVTGT 899
+ K+G K+I +TE+FNCRARDLYEILMDENRWKGFTQSNA+I+K+V G S+FDGSVTG
Sbjct: 218 KTKEGFKTITMTEKFNCRARDLYEILMDENRWKGFTQSNAKISKDVNGPISVFDGSVTGI 277
Query: 898 NLELKEAKLIVQRWRFGSWNDGVVSTVRLVFEEPEPGVTVVKLTHSDVPEEDRYGNATVV 719
NLEL+E KLIVQ+WRFGSW DG+ STV++VFEEP+PGVT+V LTH+DVPEEDRYGNATVV
Sbjct: 278 NLELEEGKLIVQKWRFGSWPDGLDSTVKIVFEEPQPGVTIVNLTHTDVPEEDRYGNATVV 337
Query: 718 ENTERGWKDLIFQRIRAVFGFGI 650
ENTERGW+DLIF RIRAVFGFGI
Sbjct: 338 ENTERGWRDLIFHRIRAVFGFGI 360
>ref|NP_473204.2| hypothetical protein, conserved [Plasmodium falciparum 3D7]
gi|15383895|emb|CAB39022.2| hypothetical protein,
conserved [Plasmodium falciparum 3D7]
Length = 140
Score = 79.0 bits (193), Expect = 1e-13
Identities = 39/135 (28%), Positives = 68/135 (49%), Gaps = 1/135 (0%)
Frame = -2
Query: 1057 SIRLTERFNCRARDLYEILMDENRWKGFTQSN-ARINKEVGGDFSIFDGSVTGTNLELKE 881
S +TE + L+ D ++ + A ++ +VGG FS+F GS+ G E+ +
Sbjct: 2 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLFSGSILGEFTEITK 61
Query: 880 AKLIVQRWRFGSWNDGVVSTVRLVFEEPEPGVTVVKLTHSDVPEEDRYGNATVVENTERG 701
IV++W+F WN+ STV + F + T +KLTH+++P ++Y V+E + G
Sbjct: 62 PHKIVEKWKFRDWNECDYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNG 121
Query: 700 WKDLIFQRIRAVFGF 656
W I + G+
Sbjct: 122 WTQNFLHNIEVILGY 136
>ref|NP_666148.1| cDNA sequence BC023857; hypothetical protein MGC36589 [Mus musculus]
gi|19344046|gb|AAH25552.1| Similar to chromosome 14 open
reading frame 3 [Mus musculus] gi|23272235|gb|AAH23857.1|
hypothetical protein MGC36589 [Mus musculus]
Length = 338
Score = 75.1 bits (183), Expect = 2e-12
Identities = 48/153 (31%), Positives = 75/153 (48%), Gaps = 6/153 (3%)
Frame = -2
Query: 1093 AAPTKEVKK--GVK----SIRLTERFNCRARDLYEILMDENRWKGFTQSNARINKEVGGD 932
+AP+K K GVK I L E F +LY + + + FT + A + + GG
Sbjct: 190 SAPSKSQAKPVGVKIPTCKITLKETFLTSPEELYRVFTTQELVQAFTHAPAALEADRGGK 249
Query: 931 FSIFDGSVTGTNLELKEAKLIVQRWRFGSWNDGVVSTVRLVFEEPEPGVTVVKLTHSDVP 752
F + DG+VTG +L K I +WRF SW +G +T+ L F + + G T + + +P
Sbjct: 250 FHMVDGNVTGEFTDLVPEKHIAMKWRFKSWPEGHFATITLTFID-KNGETELCMEGRGIP 308
Query: 751 EEDRYGNATVVENTERGWKDLIFQRIRAVFGFG 653
+ E T +GW+ F+ I+ FG+G
Sbjct: 309 APEE-------ERTRQGWQRYYFEGIKQTFGYG 334
>ref|NP_610121.2| CG1416-PA [Drosophila melanogaster] gi|24585722|ref|NP_724361.1|
CG1416-PB [Drosophila melanogaster]
gi|24585724|ref|NP_724362.1| CG1416-PC [Drosophila
melanogaster] gi|21464348|gb|AAM51977.1| LD43819p
[Drosophila melanogaster] gi|22947044|gb|AAF57232.2|
CG1416-PA [Drosophila melanogaster]
gi|22947045|gb|AAN11136.1| CG1416-PB [Drosophila
melanogaster] gi|22947046|gb|AAN11137.1| CG1416-PC
[Drosophila melanogaster]
Length = 354
Score = 73.6 bits (179), Expect = 5e-12
Identities = 43/140 (30%), Positives = 68/140 (47%)
Frame = -2
Query: 1072 KKGVKSIRLTERFNCRARDLYEILMDENRWKGFTQSNARINKEVGGDFSIFDGSVTGTNL 893
K V+++ +TE F+C A DLY L FT++ A+++ GG+F ++ G+V G
Sbjct: 216 KLDVRTLSMTEEFHCSANDLYNALTKPEMVTAFTRAPAKVDAVRGGEFILYGGNVLGKFE 275
Query: 892 ELKEAKLIVQRWRFGSWNDGVVSTVRLVFEEPEPGVTVVKLTHSDVPEEDRYGNATVVEN 713
EL K I Q WR +W G S V + EE T++ L + +P A+ +
Sbjct: 276 ELVPEKKIQQSWRLKNWTSGHYSNVVIELEETSSS-TMMSLKQTGIP-------ASEFDA 327
Query: 712 TERGWKDLIFQRIRAVFGFG 653
+ W + I+ FGFG
Sbjct: 328 MKTNWYRYYWHSIKQTFGFG 347
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 951,972,745
Number of Sequences: 1393205
Number of extensions: 22398477
Number of successful extensions: 64373
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 58302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63960
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 65614730658
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
