Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010132A_C02 KMC010132A_c02
(581 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196593.1| putative protein; protein id: At5g10310.1 [Arab... 62 4e-09
ref|NP_680774.1| unknown protein; protein id: At4g37810.1 [Arabi... 50 2e-05
dbj|BAC24916.1| OJ1606_D04.4 [Oryza sativa (japonica cultivar-gr... 34 1.5
ref|NP_048216.1| ORF MSV145 hypothetical protein [Melanoplus san... 33 2.0
pir||S54128 hypothetical 21.4K protein - fowl adenovirus 1 gi|78... 32 5.8
>ref|NP_196593.1| putative protein; protein id: At5g10310.1 [Arabidopsis thaliana]
gi|11285694|pir||T50819 hypothetical protein F18D22_80 -
Arabidopsis thaliana gi|8953412|emb|CAB96687.1| putative
protein [Arabidopsis thaliana]
Length = 122
Score = 62.4 bits (150), Expect = 4e-09
Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Frame = -1
Query: 581 CMAVQVPTLPTHNS---VNP------PPDLSKTASMENWPYPSLQGTRYSNYKPLGWKCH 429
CMA+QVPTLPT + VNP P S T ++ +YSNYKP+GWKCH
Sbjct: 65 CMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLD----------QYSNYKPMGWKCH 114
Query: 428 CGDHFFNP 405
C HF+NP
Sbjct: 115 CNGHFYNP 122
>ref|NP_680774.1| unknown protein; protein id: At4g37810.1 [Arabidopsis thaliana]
gi|7487503|pir||T06028 hypothetical protein T28I19.90 -
Arabidopsis thaliana gi|4490726|emb|CAB38929.1|
hypothetical protein [Arabidopsis thaliana]
gi|7270764|emb|CAB80446.1| hypothetical protein
[Arabidopsis thaliana]
Length = 128
Score = 50.4 bits (119), Expect = 2e-05
Identities = 23/59 (38%), Positives = 33/59 (54%)
Frame = -1
Query: 581 CMAVQVPTLPTHNSVNPPPDLSKTASMENWPYPSLQGTRYSNYKPLGWKCHCGDHFFNP 405
C A+QVPT P ++ P S ++S E +G +NYKP+ WKC CG+ +NP
Sbjct: 71 CEAIQVPTNP-QTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128
>dbj|BAC24916.1| OJ1606_D04.4 [Oryza sativa (japonica cultivar-group)]
Length = 129
Score = 33.9 bits (76), Expect = 1.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 461 SNYKPLGWKCHCGDHFFNP 405
SNYKPL WKC CG +P
Sbjct: 111 SNYKPLSWKCKCGGIILDP 129
>ref|NP_048216.1| ORF MSV145 hypothetical protein [Melanoplus sanguinipes
entomopoxvirus] gi|11362349|pir||T28306 ORF MSV145
hypothetical protein - Melanoplus sanguinipes
entomopoxvirus gi|4049828|gb|AAC97788.1| ORF MSV145
hypothetical protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 525
Score = 33.5 bits (75), Expect = 2.0
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Frame = +3
Query: 6 QNYHIILHNTIR*LQKTQ*STKENFLKIIHIDSTYRRNSGLAVTNSAIQVYQ---SNFNV 176
+NY +I+HN +R + + KE II+ID+ Y+ S + +VY SN N+
Sbjct: 61 KNYKLIIHNLLRQIMNST-DLKEYINNIINIDN-YKNLSDYIINKFWDKVYNVPPSNINI 118
Query: 177 YNQC*RK*HISMTLSS----NYQGPQKKHKHLVII*FNQQNKIKKEMGNR*LVITILQND 344
N + ++S LS Y P K + L+ +++++ L I+IL ND
Sbjct: 119 DNI--KNINVSSLLSKVVTYKYYDPNKVTEFLIFTYYSKKD----------LAISILTND 166
Query: 345 QDEEIE 362
D EI+
Sbjct: 167 -DAEID 171
>pir||S54128 hypothetical 21.4K protein - fowl adenovirus 1
gi|780169|emb|CAA59208.1| orf4 [Fowl adenovirus 1]
Length = 207
Score = 32.0 bits (71), Expect = 5.8
Identities = 14/24 (58%), Positives = 19/24 (78%)
Frame = -1
Query: 572 VQVPTLPTHNSVNPPPDLSKTASM 501
V V +P+ ++V+PPPDLS TASM
Sbjct: 7 VAVTEIPSGSAVSPPPDLSLTASM 30
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,540,964
Number of Sequences: 1393205
Number of extensions: 10647354
Number of successful extensions: 31284
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31264
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
