Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010118A_C01 KMC010118A_c01
(657 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB56038.1| putative protein kinase homolog [Oryza sativa (j... 116 2e-25
ref|NP_567568.1| protein kinase - like protein; protein id: At4g... 112 4e-24
pir||T05032 protein kinase homolog F13C5.120 - Arabidopsis thali... 112 4e-24
gb|AAK91452.1| AT3g58760/T20N10_110 [Arabidopsis thaliana] gi|21... 96 5e-19
pir||T49159 hypothetical protein T20N10.110 - Arabidopsis thalia... 96 5e-19
>dbj|BAB56038.1| putative protein kinase homolog [Oryza sativa (japonica
cultivar-group)]
Length = 404
Score = 116 bits (291), Expect = 2e-25
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = -3
Query: 655 RENDVPKVYAAKERPPFHAPAKRYSHGLRELIEECWNENPAKRPTFRQIIIKLESIYNTI 476
+ N++ K + +KERPPF AP K Y++GLRELIE+CW+ENPA RP FR II +L I N I
Sbjct: 304 KNNEIEKAHNSKERPPFRAPPKHYAYGLRELIEQCWSENPASRPDFRTIIEQLSYIQNEI 363
Query: 475 GQKRRWKVRPLKCFQNLEALLKRDHSDRSSRGGSSRSTAS 356
Q+ RWKV+PLKCF + E + K+D ++ S+ SSRS+ S
Sbjct: 364 SQRNRWKVKPLKCFLSFEGMWKKDRNEGSTT-RSSRSSRS 402
>ref|NP_567568.1| protein kinase - like protein; protein id: At4g18950.1, supported
by cDNA: 38712., supported by cDNA: gi_16648823
[Arabidopsis thaliana] gi|16648824|gb|AAL25602.1|
AT4g18950/F13C5_120 [Arabidopsis thaliana]
gi|21593412|gb|AAM65379.1| protein kinase-like protein
[Arabidopsis thaliana] gi|22655372|gb|AAM98278.1|
At4g18950/F13C5_120 [Arabidopsis thaliana]
Length = 459
Score = 112 bits (280), Expect = 4e-24
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = -3
Query: 652 ENDVPKVYAAKERPPFHAPAKRYSHGLRELIEECWNENPAKRPTFRQIIIKLESIYNTIG 473
+++ + YA K RP F AP+K Y HGL+ LIEECW+E PAKRPTFR+II +LESI + +G
Sbjct: 362 DSEASEAYAGKHRPLFKAPSKNYPHGLKTLIEECWHEKPAKRPTFREIIKRLESILHHMG 421
Query: 472 QKRRWKVRPLKCFQNLEALLKRDHSDRSSRGGSS 371
KR+W++RPL CFQN E K+ + D SS GSS
Sbjct: 422 HKRQWRMRPLTCFQNFEH-KKKHNWDLSSHDGSS 454
>pir||T05032 protein kinase homolog F13C5.120 - Arabidopsis thaliana
gi|2832623|emb|CAA16752.1| protein kinase-like protein
[Arabidopsis thaliana] gi|7268689|emb|CAB78897.1|
protein kinase-like protein [Arabidopsis thaliana]
Length = 421
Score = 112 bits (280), Expect = 4e-24
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = -3
Query: 652 ENDVPKVYAAKERPPFHAPAKRYSHGLRELIEECWNENPAKRPTFRQIIIKLESIYNTIG 473
+++ + YA K RP F AP+K Y HGL+ LIEECW+E PAKRPTFR+II +LESI + +G
Sbjct: 324 DSEASEAYAGKHRPLFKAPSKNYPHGLKTLIEECWHEKPAKRPTFREIIKRLESILHHMG 383
Query: 472 QKRRWKVRPLKCFQNLEALLKRDHSDRSSRGGSS 371
KR+W++RPL CFQN E K+ + D SS GSS
Sbjct: 384 HKRQWRMRPLTCFQNFEH-KKKHNWDLSSHDGSS 416
>gb|AAK91452.1| AT3g58760/T20N10_110 [Arabidopsis thaliana]
gi|21700817|gb|AAM70532.1| AT3g58760/T20N10_110
[Arabidopsis thaliana]
Length = 137
Score = 95.5 bits (236), Expect = 5e-19
Identities = 47/99 (47%), Positives = 63/99 (63%)
Frame = -3
Query: 652 ENDVPKVYAAKERPPFHAPAKRYSHGLRELIEECWNENPAKRPTFRQIIIKLESIYNTIG 473
+ +VPK Y ERPPF+AP K Y GL+ELI++CW++ +KRPTFR II LE I + I
Sbjct: 39 DREVPKAYIEDERPPFNAPTKSYPFGLQELIQDCWDKEASKRPTFRVIISTLELISDRIA 98
Query: 472 QKRRWKVRPLKCFQNLEALLKRDHSDRSSRGGSSRSTAS 356
+KR WKV +C KRD+ + GGS+RS+ S
Sbjct: 99 RKRSWKVMLGRCLPRFRLFTKRDY---VNPGGSNRSSGS 134
>pir||T49159 hypothetical protein T20N10.110 - Arabidopsis thaliana
gi|7630071|emb|CAB88293.1| putative protein [Arabidopsis
thaliana]
Length = 456
Score = 95.5 bits (236), Expect = 5e-19
Identities = 47/99 (47%), Positives = 63/99 (63%)
Frame = -3
Query: 652 ENDVPKVYAAKERPPFHAPAKRYSHGLRELIEECWNENPAKRPTFRQIIIKLESIYNTIG 473
+ +VPK Y ERPPF+AP K Y GL+ELI++CW++ +KRPTFR II LE I + I
Sbjct: 358 DREVPKAYIEDERPPFNAPTKSYPFGLQELIQDCWDKEASKRPTFRVIISTLELISDRIA 417
Query: 472 QKRRWKVRPLKCFQNLEALLKRDHSDRSSRGGSSRSTAS 356
+KR WKV +C KRD+ + GGS+RS+ S
Sbjct: 418 RKRSWKVMLGRCLPRFRLFTKRDY---VNPGGSNRSSGS 453
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 549,971,290
Number of Sequences: 1393205
Number of extensions: 11619057
Number of successful extensions: 33944
Number of sequences better than 10.0: 632
Number of HSP's better than 10.0 without gapping: 32993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33930
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28006887348
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
