Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010110A_C01 KMC010110A_c01
(626 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564003.1| receptor-like serine/threonine kinase, putative... 102 4e-21
pir||H86301 hypothetical protein F19K19.4 [imported] - Arabidops... 102 4e-21
emb|CAB51836.1| Putitive Ser/Thr protein kinase [Oryza sativa (i... 94 1e-18
emb|CAB55406.1| zwh22.1 [Oryza sativa (indica cultivar-group)] 92 7e-18
gb|AAM91884.1| putative receptor-like protein kinase [Oryza sati... 83 3e-15
>ref|NP_564003.1| receptor-like serine/threonine kinase, putative; protein id:
At1g16670.1, supported by cDNA: gi_16649102 [Arabidopsis
thaliana] gi|16649103|gb|AAL24403.1| Unknown protein
[Arabidopsis thaliana] gi|23197888|gb|AAN15471.1|
Unknown protein [Arabidopsis thaliana]
Length = 390
Score = 102 bits (254), Expect = 4e-21
Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Frame = -3
Query: 624 KSDVYSFGVLLLEIVSGREVVDYHQDME-QFLVEQAWEAYEGNDLLSMVDPVLNMNIPVE 448
K+D+YSFGVLL+EIVSGR + E Q+L+E+AWE YE N+L+ +VD LN E
Sbjct: 225 KADIYSFGVLLMEIVSGRSNKNTRLPTEYQYLLERAWELYERNELVDLVDSGLNGVFDAE 284
Query: 447 EAKRFLVVGLRCVQETAKLRPRMSEVVEMLTNSIDMEEDGHNISKPGFVSN 295
EA R+L +GL C Q++ KLRP MS VV +LT D+ D IS+PG +S+
Sbjct: 285 EACRYLKIGLLCTQDSPKLRPSMSTVVRLLTGEKDI--DYKKISRPGLISD 333
>pir||H86301 hypothetical protein F19K19.4 [imported] - Arabidopsis thaliana
gi|9989053|gb|AAG10816.1|AC011808_4 Unknown protein
[Arabidopsis thaliana]
Length = 396
Score = 102 bits (254), Expect = 4e-21
Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Frame = -3
Query: 624 KSDVYSFGVLLLEIVSGREVVDYHQDME-QFLVEQAWEAYEGNDLLSMVDPVLNMNIPVE 448
K+D+YSFGVLL+EIVSGR + E Q+L+E+AWE YE N+L+ +VD LN E
Sbjct: 231 KADIYSFGVLLMEIVSGRSNKNTRLPTEYQYLLERAWELYERNELVDLVDSGLNGVFDAE 290
Query: 447 EAKRFLVVGLRCVQETAKLRPRMSEVVEMLTNSIDMEEDGHNISKPGFVSN 295
EA R+L +GL C Q++ KLRP MS VV +LT D+ D IS+PG +S+
Sbjct: 291 EACRYLKIGLLCTQDSPKLRPSMSTVVRLLTGEKDI--DYKKISRPGLISD 339
>emb|CAB51836.1| Putitive Ser/Thr protein kinase [Oryza sativa (indica
cultivar-group)]
Length = 319
Score = 94.4 bits (233), Expect = 1e-18
Identities = 56/149 (37%), Positives = 84/149 (55%), Gaps = 1/149 (0%)
Frame = -3
Query: 624 KSDVYSFGVLLLEIVSGREVVDYHQDME-QFLVEQAWEAYEGNDLLSMVDPVLNMNIPVE 448
KSD+YSFGVLLLEIVSGR + E QFL+E+ W YE L ++D L ++ V+
Sbjct: 166 KSDIYSFGVLLLEIVSGRCNTNTRLPYEDQFLLERTWVRYEQERLAEIIDADLGNDLDVD 225
Query: 447 EAKRFLVVGLRCVQETAKLRPRMSEVVEMLTNSIDMEEDGHNISKPGFVSNIRKRQQAQT 268
EA RFL +GL C Q+ RP MS VV MLT + H I++P +++ + + +
Sbjct: 226 EACRFLKIGLLCTQDAMARRPNMSTVVRMLTG--EKHFSVHRITRPAMITDFADLKVSSS 283
Query: 267 LEESSSATANFSSSMWSTTNLAR*IYNSE 181
++ + T + + +STT+ +SE
Sbjct: 284 QQKENETTRSSNMRSFSTTDETEPFSSSE 312
>emb|CAB55406.1| zwh22.1 [Oryza sativa (indica cultivar-group)]
Length = 661
Score = 91.7 bits (226), Expect = 7e-18
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Frame = -3
Query: 624 KSDVYSFGVLLLEIVSGREVVDYHQDME-QFLVEQAWEAYEGNDLLSMVDPVLNMNIPVE 448
KSD+YSFGVLLLEIVSGR + E QFL+E+ W YE L ++D L ++ V+
Sbjct: 464 KSDIYSFGVLLLEIVSGRCNTNTRLPYEDQFLLERTWVRYEQERLAEIIDADLGNDLDVD 523
Query: 447 EAKRFLVVGLRCVQETAKLRPRMSEVVEMLTNSIDMEEDGHNISKPGFVSNIRKRQQAQT 268
EA RFL +GL C Q+ RP MS VV MLT + H I++P +++ + + +
Sbjct: 524 EACRFLKIGLLCTQDAMARRPNMSTVVRMLTG--EKHFSVHRITRPAMITDFADLKVSSS 581
Query: 267 LEESSSATANFSSSMWSTTNLAR*IYNSEVLVLNRIMPKCP 145
++ + T N + T +A +++++ V KCP
Sbjct: 582 QQKENETTRNEILARSCTYAMASAAHHADLSVGR----KCP 618
>gb|AAM91884.1| putative receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 373
Score = 83.2 bits (204), Expect = 3e-15
Identities = 52/139 (37%), Positives = 78/139 (55%), Gaps = 3/139 (2%)
Frame = -3
Query: 624 KSDVYSFGVLLLEIVSGREVVDYHQDME-QFLVEQAWEAYEGNDLLSMVDPVLN-MNIPV 451
K D YSFGV++LEI+SGR++ D D + Q+L+E AW+ YE N+L+ +VD L+
Sbjct: 236 KVDTYSFGVVVLEIISGRKLNDARLDPDSQYLLEWAWKLYENNNLIELVDKSLDPKEYNP 295
Query: 450 EEAKRFLVVGLRCVQETAKLRPRMSEVVEMLTNSIDMEEDGHNISKPGFVSNI-RKRQQA 274
EE K+ + + L C Q RP MSEVV +L E ++P F+ I R R +
Sbjct: 296 EEVKKIIQIALLCTQSAVASRPTMSEVVVLLLTKNSSE---FQPTRPTFIDAISRVRGET 352
Query: 273 QTLEESSSATANFSSSMWS 217
+ SS++ A S + +S
Sbjct: 353 SSSSSSSASKATISITQYS 371
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 524,503,655
Number of Sequences: 1393205
Number of extensions: 11021272
Number of successful extensions: 31769
Number of sequences better than 10.0: 1691
Number of HSP's better than 10.0 without gapping: 29652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30589
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
