Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010082A_C01 KMC010082A_c01
(498 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM65001.1| DAG protein, putative [Arabidopsis thaliana] 206 9e-53
ref|NP_172610.1| DAG protein, putative; protein id: At1g11430.1,... 205 2e-52
sp|Q38732|DAG_ANTMA DAG PROTEIN, CHLOROPLAST PRECURSOR gi|748929... 202 1e-51
gb|AAO22791.1| putative DAG protein [Arabidopsis thaliana] gi|28... 118 4e-26
ref|NP_187335.1| DAG protein, putative; protein id: At3g06790.1 ... 118 4e-26
>gb|AAM65001.1| DAG protein, putative [Arabidopsis thaliana]
Length = 232
Score = 206 bits (525), Expect = 9e-53
Identities = 100/124 (80%), Positives = 110/124 (88%), Gaps = 1/124 (0%)
Frame = +2
Query: 128 RSIRAVTRARNPTRIRAA-LDEDYSAKRSSSSEQRETIMLPGCDYNHWLIVMEFPKDPAP 304
RSI R ++AA +D DYS+KRS+S+EQRETIMLPGCDYNHWLIVMEFPKDPAP
Sbjct: 43 RSISTAGSRRRVAIVKAATVDSDYSSKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAP 102
Query: 305 SREQMIETYLFTLSTVLGSMEEAKKNMYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVL 484
SR+QMI+TYL TL+TVLGSMEEAKKNMYAFSTTTYTGFQCT+DE TSEKFKGLPGVLWVL
Sbjct: 103 SRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVL 162
Query: 485 PDSY 496
PDSY
Sbjct: 163 PDSY 166
>ref|NP_172610.1| DAG protein, putative; protein id: At1g11430.1, supported by cDNA:
35647. [Arabidopsis thaliana]
gi|6554182|gb|AAF16628.1|AC011661_6 T23J18.10
[Arabidopsis thaliana] gi|26450103|dbj|BAC42171.1|
unknown protein [Arabidopsis thaliana]
gi|28827520|gb|AAO50604.1| putative DAG protein
[Arabidopsis thaliana]
Length = 232
Score = 205 bits (522), Expect = 2e-52
Identities = 99/124 (79%), Positives = 110/124 (87%), Gaps = 1/124 (0%)
Frame = +2
Query: 128 RSIRAVTRARNPTRIRAA-LDEDYSAKRSSSSEQRETIMLPGCDYNHWLIVMEFPKDPAP 304
R+I R ++AA +D DYS+KRS+S+EQRETIMLPGCDYNHWLIVMEFPKDPAP
Sbjct: 43 RNISTAGSRRRVAIVKAATVDSDYSSKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAP 102
Query: 305 SREQMIETYLFTLSTVLGSMEEAKKNMYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVL 484
SR+QMI+TYL TL+TVLGSMEEAKKNMYAFSTTTYTGFQCT+DE TSEKFKGLPGVLWVL
Sbjct: 103 SRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVL 162
Query: 485 PDSY 496
PDSY
Sbjct: 163 PDSY 166
>sp|Q38732|DAG_ANTMA DAG PROTEIN, CHLOROPLAST PRECURSOR gi|7489296|pir||S71747 DAG
protein precursor, 26K - garden snapdragon
gi|1200205|emb|CAA65064.1| DAG [Antirrhinum majus]
Length = 230
Score = 202 bits (515), Expect = 1e-51
Identities = 111/167 (66%), Positives = 126/167 (74%), Gaps = 5/167 (2%)
Frame = +2
Query: 11 MATITFSFSAKTLTLPFHSKTPSLFNFFNPSLNFNRVA-PRSIRAVTRARNPTRIRAALD 187
MATI S KTLT + P L SL+F P I++ + A PT +RA D
Sbjct: 1 MATINLSLLPKTLTPNSKTLAPLLSILSTSSLSFLPCTRPHPIKSRSAAY-PT-VRALTD 58
Query: 188 EDYSAKRSS----SSEQRETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVL 355
+YS++R++ S E+RETIMLPGCDYNHWLIVMEFPKDPAP+REQMI+TYL TL+TVL
Sbjct: 59 GEYSSRRNNNNNNSGEERETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVL 118
Query: 356 GSMEEAKKNMYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSY 496
GSMEEAKKNMYAFSTTTYTGFQCTV E TSEKFKGLPGVLWVLPDSY
Sbjct: 119 GSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSY 165
>gb|AAO22791.1| putative DAG protein [Arabidopsis thaliana]
gi|28394075|gb|AAO42445.1| putative DAG protein
[Arabidopsis thaliana]
Length = 244
Score = 118 bits (295), Expect = 4e-26
Identities = 57/95 (60%), Positives = 70/95 (73%)
Frame = +2
Query: 212 SSSEQRETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYA 391
S+ +ETI+L GCDY HWLIVMEF DP P+ E+MI +Y+ TL++VLG EEAKK +Y+
Sbjct: 79 SNRPPKETILLDGCDYEHWLIVMEFT-DPKPTEEEMINSYVKTLTSVLGCEEEAKKKIYS 137
Query: 392 FSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSY 496
T+TYTGF + E S K K LPGVLWVLPDSY
Sbjct: 138 VCTSTYTGFGALISEELSCKVKALPGVLWVLPDSY 172
>ref|NP_187335.1| DAG protein, putative; protein id: At3g06790.1 [Arabidopsis
thaliana] gi|7549634|gb|AAF63819.1| DAG protein,
putative [Arabidopsis thaliana]
Length = 244
Score = 118 bits (295), Expect = 4e-26
Identities = 57/95 (60%), Positives = 70/95 (73%)
Frame = +2
Query: 212 SSSEQRETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYA 391
S+ +ETI+L GCDY HWLIVMEF DP P+ E+MI +Y+ TL++VLG EEAKK +Y+
Sbjct: 79 SNRPPKETILLDGCDYEHWLIVMEFT-DPKPTEEEMINSYVKTLTSVLGWQEEAKKKIYS 137
Query: 392 FSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSY 496
T+TYTGF + E S K K LPGVLWVLPDSY
Sbjct: 138 VCTSTYTGFGALISEELSCKVKALPGVLWVLPDSY 172
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 484,025,050
Number of Sequences: 1393205
Number of extensions: 11578335
Number of successful extensions: 44745
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 39400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44229
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
