Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010077A_C01 KMC010077A_c01
(636 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH06040.1| Unknown (protein for MGC:7642) [Mus musculus] 157 9e-38
pir||F86145 F22L4.5 protein - Arabidopsis thaliana gi|8920587|gb... 120 2e-26
ref|NP_171656.1| expressed protein; protein id: At1g01490.1, sup... 120 2e-26
emb|CAA71172.1| hypothetical protein [Arabidopsis thaliana] 107 1e-22
gb|AAB03641.1| unknown protein 85 7e-16
>gb|AAH06040.1| Unknown (protein for MGC:7642) [Mus musculus]
Length = 167
Score = 157 bits (398), Expect = 9e-38
Identities = 79/105 (75%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
Frame = -3
Query: 634 VSVGPAKEPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEE-AKKEEPKKEEEKKDEKKEEE 458
V VGPAKEPEK+ KKEEP+KEEEKK+EPK EEP+KEE AKKEEPKKE EKK+E K+EE
Sbjct: 66 VLVGPAKEPEKE---KKEEPKKEEEKKEEPKKEEPKKEEEAKKEEPKKEGEKKEEPKKEE 122
Query: 457 KKKEQPAQIDPVLEWVKAYRQYNPHMTTYYHVQSMEENPNACVIC 323
KKE+ + DPVLE VKAY+QYNP MTTYY+VQS+EENPNAC IC
Sbjct: 123 GKKEEEKKPDPVLELVKAYKQYNPQMTTYYYVQSIEENPNACAIC 167
>pir||F86145 F22L4.5 protein - Arabidopsis thaliana
gi|8920587|gb|AAF81309.1|AC061957_5 Contains a weak
similarity to a farnesylated protein GMFP5 mRNA from
Glycine max gb|U64916. ESTs gb|AI993148, gb|T44360 come
from this gene. [Arabidopsis thaliana]
Length = 203
Score = 120 bits (301), Expect = 2e-26
Identities = 69/115 (60%), Positives = 79/115 (68%), Gaps = 11/115 (9%)
Frame = -3
Query: 634 VSVGPAKEPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKE--EPKKEEEKKD--EKK 467
V VGPAKEPEK+ KKEEP+KE + K E KEE KKE PKKEEEKK+ +KK
Sbjct: 92 VLVGPAKEPEKE---KKEEPKKEGGGEPPKKEGEAPKEEGKKEGEAPKKEEEKKEGGDKK 148
Query: 466 EEEKKKEQPAQIDPV-------LEWVKAYRQYNPHMTTYYHVQSMEENPNACVIC 323
E EKK + AQ PV LE VKAY+ YNPH+TTYY+ QS+EENPNACVIC
Sbjct: 149 EGEKKDQPQAQPQPVVPPPDHVLELVKAYKAYNPHLTTYYYAQSIEENPNACVIC 203
>ref|NP_171656.1| expressed protein; protein id: At1g01490.1, supported by cDNA:
gi_17380661 [Arabidopsis thaliana]
gi|1922242|emb|CAA71173.1| hypothetical protein
[Arabidopsis thaliana] gi|17380662|gb|AAL36161.1|
unknown protein [Arabidopsis thaliana]
gi|20258999|gb|AAM14215.1| unknown protein [Arabidopsis
thaliana]
Length = 177
Score = 120 bits (301), Expect = 2e-26
Identities = 69/115 (60%), Positives = 79/115 (68%), Gaps = 11/115 (9%)
Frame = -3
Query: 634 VSVGPAKEPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKE--EPKKEEEKKD--EKK 467
V VGPAKEPEK+ KKEEP+KE + K E KEE KKE PKKEEEKK+ +KK
Sbjct: 66 VLVGPAKEPEKE---KKEEPKKEGGGEPPKKEGEAPKEEGKKEGEAPKKEEEKKEGGDKK 122
Query: 466 EEEKKKEQPAQIDPV-------LEWVKAYRQYNPHMTTYYHVQSMEENPNACVIC 323
E EKK + AQ PV LE VKAY+ YNPH+TTYY+ QS+EENPNACVIC
Sbjct: 123 EGEKKDQPQAQPQPVVPPPDHVLELVKAYKAYNPHLTTYYYAQSIEENPNACVIC 177
>emb|CAA71172.1| hypothetical protein [Arabidopsis thaliana]
Length = 101
Score = 107 bits (268), Expect = 1e-22
Identities = 60/104 (57%), Positives = 71/104 (67%), Gaps = 9/104 (8%)
Frame = -3
Query: 607 EKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKD--EKKEEEKKKEQPAQ 434
EKKEEPKKE + +K+ E EE +KE E PKKEEEKK+ +KKE EKK + AQ
Sbjct: 1 EKKEEPKKEGGGEPPKKEGEAPKEEGKKEG---EAPKKEEEKKEGGDKKEGEKKDQPQAQ 57
Query: 433 IDPV-------LEWVKAYRQYNPHMTTYYHVQSMEENPNACVIC 323
PV LE VKAY+ YNPH+TTYY+ QS+EENPNACVIC
Sbjct: 58 PQPVVPPPDHVLELVKAYKAYNPHLTTYYYAQSIEENPNACVIC 101
>gb|AAB03641.1| unknown protein
Length = 622
Score = 85.1 bits (209), Expect = 7e-16
Identities = 39/67 (58%), Positives = 55/67 (81%)
Frame = -3
Query: 616 KEPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKDEKKEEEKKKEQPA 437
KE +KEEP+KEEPQKEE +K+E + EEPQKEE +KEEP+KEE +K+E ++EE +KE+P
Sbjct: 544 KEEPQKEEPQKEEPQKEELQKEELQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQ 603
Query: 436 QIDPVLE 416
+ +P +E
Sbjct: 604 KEEPKVE 610
Score = 83.6 bits (205), Expect = 2e-15
Identities = 38/61 (62%), Positives = 51/61 (83%)
Frame = -3
Query: 622 PAKEPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKDEKKEEEKKKEQ 443
P KE +KEEP+KEE QKEE +K+EP+ EEPQKEE +KEEP+KEE +K+E ++EE +KE+
Sbjct: 547 PQKEEPQKEEPQKEELQKEELQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKEE 606
Query: 442 P 440
P
Sbjct: 607 P 607
Score = 79.7 bits (195), Expect = 3e-14
Identities = 38/66 (57%), Positives = 52/66 (78%)
Frame = -3
Query: 613 EPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKDEKKEEEKKKEQPAQ 434
E KKEEP+KEEPQKEE +K+E + EE QKEE +KEEP+KEE +K+E ++EE +KE+P +
Sbjct: 540 EEIKKEEPQKEEPQKEEPQKEELQKEELQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQK 599
Query: 433 IDPVLE 416
+P E
Sbjct: 600 EEPQKE 605
Score = 79.3 bits (194), Expect = 4e-14
Identities = 38/67 (56%), Positives = 52/67 (76%)
Frame = -3
Query: 616 KEPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKDEKKEEEKKKEQPA 437
KE + EE KKEEPQKEE +K+EP+ EE QKEE +KEEP+KEE +K+E ++EE +KE+P
Sbjct: 534 KEEVQLEEIKKEEPQKEEPQKEEPQKEELQKEELQKEEPQKEEPQKEEPQKEEPQKEEPQ 593
Query: 436 QIDPVLE 416
+ +P E
Sbjct: 594 KEEPQKE 600
Score = 79.0 bits (193), Expect = 5e-14
Identities = 37/65 (56%), Positives = 50/65 (76%)
Frame = -3
Query: 622 PAKEPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKDEKKEEEKKKEQ 443
P KE +KEE +KEE QKEE +K+EP+ EEPQKEE +KEEP+KEE +K+E ++EE K E
Sbjct: 552 PQKEEPQKEELQKEELQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPKVET 611
Query: 442 PAQID 428
P ++
Sbjct: 612 PQPLE 616
Score = 72.8 bits (177), Expect = 4e-12
Identities = 34/56 (60%), Positives = 44/56 (77%)
Frame = -3
Query: 616 KEPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKDEKKEEEKKK 449
KE +KEEP+KEEPQKEE +K+EP+ EEPQKEE +KEEP+KEE K + + E+ K
Sbjct: 564 KEELQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPKVETPQPLEQSK 619
Score = 71.6 bits (174), Expect = 8e-12
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = -3
Query: 616 KEPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKDEKKEEEKKKEQPA 437
KE KEE + EE +KEE +K+EP+ EEPQKEE +KEE +KEE +K+E ++EE +KE+P
Sbjct: 529 KEKLPKEEVQLEEIKKEEPQKEEPQKEEPQKEELQKEELQKEEPQKEEPQKEEPQKEEPQ 588
Query: 436 QIDPVLE 416
+ +P E
Sbjct: 589 KEEPQKE 595
Score = 69.3 bits (168), Expect = 4e-11
Identities = 34/63 (53%), Positives = 48/63 (75%)
Frame = -3
Query: 604 KKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKDEKKEEEKKKEQPAQIDP 425
+KE+ KEE Q EE KK+EP+ EEPQKEE +KEE +KEE +K+E ++EE +KE+P + +P
Sbjct: 528 QKEKLPKEEVQLEEIKKEEPQKEEPQKEEPQKEELQKEELQKEEPQKEEPQKEEPQKEEP 587
Query: 424 VLE 416
E
Sbjct: 588 QKE 590
Score = 65.9 bits (159), Expect = 4e-10
Identities = 30/48 (62%), Positives = 37/48 (76%)
Frame = -3
Query: 622 PAKEPEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKK 479
P KE +KEEP+KEEPQKEE +K+EP+ EEPQKEE K E P+ E+ K
Sbjct: 572 PQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPKVETPQPLEQSK 619
Score = 65.1 bits (157), Expect = 8e-10
Identities = 34/69 (49%), Positives = 49/69 (70%), Gaps = 4/69 (5%)
Frame = -3
Query: 610 PEKKEEPK----KEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKDEKKEEEKKKEQ 443
PE++ PK KE+ KEE + +E K EEPQKEE +KEEP+KEE +K+E ++EE +KE+
Sbjct: 517 PEEQVAPKGDLQKEKLPKEEVQLEEIKKEEPQKEEPQKEEPQKEELQKEELQKEEPQKEE 576
Query: 442 PAQIDPVLE 416
P + +P E
Sbjct: 577 PQKEEPQKE 585
Score = 49.7 bits (117), Expect = 3e-05
Identities = 25/61 (40%), Positives = 41/61 (66%)
Frame = -3
Query: 598 EEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEKKDEKKEEEKKKEQPAQIDPVL 419
E P+++ K + +K++ EE Q EE KKEEP+KEE +K+E ++EE +KE+ + +P
Sbjct: 515 EIPEEQVAPKGDLQKEKLPKEEVQLEEIKKEEPQKEEPQKEEPQKEELQKEELQKEEPQK 574
Query: 418 E 416
E
Sbjct: 575 E 575
Score = 33.1 bits (74), Expect = 3.2
Identities = 13/64 (20%), Positives = 37/64 (57%)
Frame = -1
Query: 624 DLQRSLKRKRNQRKKNPKKRKRRKMSQRVKNPRKKRRRRKSPRKKKRRKMKRKKRRKRKS 445
++++ +K +K+ P+K + +K + + P+K+ +++ P+K++ +K + +K +K
Sbjct: 541 EIKKEEPQKEEPQKEEPQKEELQKEELQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKE 600
Query: 444 NQLK 433
K
Sbjct: 601 EPQK 604
Score = 32.0 bits (71), Expect = 7.0
Identities = 15/63 (23%), Positives = 35/63 (54%)
Frame = -1
Query: 618 QRSLKRKRNQRKKNPKKRKRRKMSQRVKNPRKKRRRRKSPRKKKRRKMKRKKRRKRKSNQ 439
Q+ +K +K+ P+K + +K + + P+K+ +++ P+K++ +K + K + Q
Sbjct: 558 QKEELQKEELQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPQKEEPKVETPQPLEQ 617
Query: 438 LKL 430
KL
Sbjct: 618 SKL 620
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 575,980,936
Number of Sequences: 1393205
Number of extensions: 14427814
Number of successful extensions: 405018
Number of sequences better than 10.0: 10402
Number of HSP's better than 10.0 without gapping: 108030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274483
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26439068301
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
