Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010051A_C01 KMC010051A_c01
(508 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568368.1| putative protein; protein id: At5g18940.1, supp... 95 4e-19
dbj|BAC06992.1| hypothetical protein [Oryza sativa (japonica cul... 65 3e-10
ref|NP_508691.1| Mouse Mo25 protein like family member [Caenorha... 59 4e-08
pir||T16651 hypothetical protein R02E12.2 - Caenorhabditis elegans 59 4e-08
ref|NP_524117.1| Mo25 CG4083-PA gi|15214070|sp|P91891|MO25_DROME... 57 2e-07
>ref|NP_568368.1| putative protein; protein id: At5g18940.1, supported by cDNA: 6139.
[Arabidopsis thaliana] gi|21593944|gb|AAM65898.1|
unknown [Arabidopsis thaliana]
Length = 345
Score = 95.1 bits (235), Expect = 4e-19
Identities = 45/61 (73%), Positives = 56/61 (91%)
Frame = -1
Query: 388 HTFIQVFVANPNKPREIKIILGKNKEKLLELLHNLSPGKGSEDEQFEEEKEFIIKEIERV 209
H F ++FVANPNKP+E+KIIL +N EKLLELLH+LSPGKGSED+QFEEEKE II+EI+++
Sbjct: 279 HIF-KIFVANPNKPQEVKIILARNHEKLLELLHDLSPGKGSEDDQFEEEKELIIEEIQKL 337
Query: 208 S 206
S
Sbjct: 338 S 338
>dbj|BAC06992.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|23307602|dbj|BAC16736.1| hypothetical protein,
similar to Arabidopsis thaliana chromosome 5, At5g18940
[Oryza sativa (japonica cultivar-group)]
Length = 322
Score = 65.5 bits (158), Expect = 3e-10
Identities = 34/57 (59%), Positives = 44/57 (76%)
Frame = -1
Query: 379 IQVFVANPNKPREIKIILGKNKEKLLELLHNLSPGKGSEDEQFEEEKEFIIKEIERV 209
++VFVANPNKPR+I +L N +LL+LL NL KG EDEQ EEE++ IIKEIE++
Sbjct: 262 LKVFVANPNKPRDIIQVLVDNHRELLKLLGNLPTSKG-EDEQLEEERDLIIKEIEKL 317
>ref|NP_508691.1| Mouse Mo25 protein like family member [Caenorhabditis elegans]
gi|14670179|gb|AAA96186.2| Hypothetical protein R02E12.2
[Caenorhabditis elegans]
Length = 636
Score = 58.5 bits (140), Expect = 4e-08
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = -1
Query: 388 HTFIQVFVANPNKPREIKIILGKNKEKLLELLHNLSPGKGSEDEQFEEEKEFIIKEIERV 209
H F +VFVANPNKP+ I IL +N+EKL+E L + ++DEQF +EK ++IK+I+ +
Sbjct: 548 HVF-KVFVANPNKPKPISDILNRNREKLVEFLSEFHNDR-TDDEQFNDEKAYLIKQIQEM 605
>pir||T16651 hypothetical protein R02E12.2 - Caenorhabditis elegans
Length = 377
Score = 58.5 bits (140), Expect = 4e-08
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = -1
Query: 388 HTFIQVFVANPNKPREIKIILGKNKEKLLELLHNLSPGKGSEDEQFEEEKEFIIKEIERV 209
H F +VFVANPNKP+ I IL +N+EKL+E L + ++DEQF +EK ++IK+I+ +
Sbjct: 289 HVF-KVFVANPNKPKPISDILNRNREKLVEFLSEFHNDR-TDDEQFNDEKAYLIKQIQEM 346
>ref|NP_524117.1| Mo25 CG4083-PA gi|15214070|sp|P91891|MO25_DROME MO25 protein
(dMo25) gi|7294077|gb|AAF49432.1| CG4083-PA [Drosophila
melanogaster] gi|21711681|gb|AAM75031.1| LD09950p
[Drosophila melanogaster]
Length = 339
Score = 56.6 bits (135), Expect = 2e-07
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 388 HTFIQVFVANPNKPREIKIILGKNKEKLLELLHNLSPGKGSEDEQFEEEKEFIIKEIERV 209
H F +VFVANPNKP+ I IL +N+ KL++ L N + SEDEQF +EK ++IK+I+ +
Sbjct: 276 HVF-KVFVANPNKPKPILDILLRNQTKLVDFLTNFHTDR-SEDEQFNDEKAYLIKQIKEL 333
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 405,711,884
Number of Sequences: 1393205
Number of extensions: 8171703
Number of successful extensions: 21044
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 20237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20975
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
