Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010050A_C01 KMC010050A_c01
(488 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190455.2| putative protein; protein id: At3g48860.1, supp... 124 4e-28
ref|NP_197759.1| putative protein; protein id: At5g23700.1 [Arab... 122 2e-27
ref|NP_194237.1| putative protein; protein id: At4g25070.1 [Arab... 120 1e-26
pir||T48573 hypothetical protein T31B5.80 - Arabidopsis thaliana... 111 4e-24
pir||T49282 hypothetical protein T21J18.130 - Arabidopsis thalia... 109 1e-23
>ref|NP_190455.2| putative protein; protein id: At3g48860.1, supported by cDNA:
gi_20260533 [Arabidopsis thaliana]
gi|20260534|gb|AAM13165.1| putative protein [Arabidopsis
thaliana]
Length = 577
Score = 124 bits (312), Expect = 4e-28
Identities = 63/100 (63%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
Frame = -3
Query: 486 ELSDEEAEDVLFKQAWLLYFWRRALFNGVED-VAEERLQFWISRSG--QTPTSRDAVDVE 316
EL + E EDV FKQAWL+YFW RA +GVED +AEER+Q WISRS TS DA+DVE
Sbjct: 478 ELGEAEQEDVAFKQAWLMYFWGRAKLHGVEDDIAEERVQLWISRSSGKSQTTSHDALDVE 537
Query: 315 QGLLELKKLGIEQKLWEASRKETDQPPSLPADNHKLSTES 196
+GL+EL+KLGIEQ+LWEASR+E DQ PS + NH L +S
Sbjct: 538 RGLIELRKLGIEQQLWEASRREIDQLPSPTSSNHDLDADS 577
Score = 34.3 bits (77), Expect = 0.77
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 483 LSDEEAEDVLFKQAWLLYFWRRALFNGV-EDVAEERLQFW 367
L+ +E E+V+ K+ WL +W A+ +G+ D+A R + W
Sbjct: 338 LTQDEMEEVVLKRCWLARYWGLAVQHGICADIAPSRQEHW 377
>ref|NP_197759.1| putative protein; protein id: At5g23700.1 [Arabidopsis thaliana]
gi|8809690|dbj|BAA97231.1|
emb|CAB87914.1~gene_id:MQM1.3~similar to unknown protein
[Arabidopsis thaliana]
Length = 497
Score = 122 bits (306), Expect = 2e-27
Identities = 64/102 (62%), Positives = 78/102 (75%), Gaps = 7/102 (6%)
Frame = -3
Query: 486 ELSDEEAEDVLFKQAWLLYFWRRALFNGVE-DVAEERLQFWISRS-GQTPTSRDAVDVEQ 313
E+ + E EDV FKQAWL+YFW RA + VE D+A+ER QFW SRS G++PTS+DAVDVE+
Sbjct: 396 EIKEGEQEDVAFKQAWLMYFWGRAKLHSVEEDIADERFQFWTSRSEGKSPTSQDAVDVER 455
Query: 312 GLLELKKLGIEQKLWEASRKETDQ--PPSLPA---DNHKLST 202
GLLEL+KLG+EQ+LWEA RKETDQ P S P NH L +
Sbjct: 456 GLLELRKLGVEQQLWEACRKETDQLLPSSSPTSTLSNHNLDS 497
>ref|NP_194237.1| putative protein; protein id: At4g25070.1 [Arabidopsis thaliana]
gi|7485452|pir||T05528 hypothetical protein F13M23.210 -
Arabidopsis thaliana gi|4455250|emb|CAB36749.1| putative
protein [Arabidopsis thaliana]
gi|7269357|emb|CAB79416.1| putative protein [Arabidopsis
thaliana]
Length = 317
Score = 120 bits (300), Expect = 1e-26
Identities = 57/89 (64%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = -3
Query: 486 ELSDEEAEDVLFKQAWLLYFWRRALFNGVE-DVAEERLQFWISRSGQTPTSRDAVDVEQG 310
ELS +E +D+LFK+AWLLYFW+RA +GVE D+AEERLQFWI+R GQ +S DA+DVE+G
Sbjct: 220 ELSHDEQQDILFKEAWLLYFWKRAKIHGVESDIAEERLQFWINRLGQHSSSHDAIDVERG 279
Query: 309 LLELKKLGIEQKLWEASRKETDQPPSLPA 223
+ EL+KLGIEQ+LWE SRKE LP+
Sbjct: 280 MRELRKLGIEQQLWETSRKELIDSSFLPS 308
Score = 32.3 bits (72), Expect = 2.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 465 EDVLFKQAWLLYFWRRALFNGV-EDVAEERLQFW 367
E+V+ K+ WL +W A+ +G+ ED++ R + W
Sbjct: 99 EEVVLKRCWLARYWELAVQHGICEDISTSRYEHW 132
>pir||T48573 hypothetical protein T31B5.80 - Arabidopsis thaliana
gi|7529281|emb|CAB86633.1| putative protein [Arabidopsis
thaliana]
Length = 576
Score = 111 bits (278), Expect = 4e-24
Identities = 54/78 (69%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = -3
Query: 486 ELSDEEAEDVLFKQAWLLYFWRRALFNGVE-DVAEERLQFWISRSGQTPTSRDAVDVEQG 310
ELS EE+EDVLFK+AWL YFWRRA G+E D A ERL+FWISRS +P+S DA++VEQG
Sbjct: 496 ELSQEESEDVLFKEAWLTYFWRRAQSLGIEVDTARERLRFWISRSAHSPSSHDAMEVEQG 555
Query: 309 LLELKKLGIEQKLWEASR 256
L EL+KL IE++LWEASR
Sbjct: 556 LTELRKLRIERRLWEASR 573
Score = 34.3 bits (77), Expect = 0.77
Identities = 26/101 (25%), Positives = 43/101 (41%), Gaps = 1/101 (0%)
Frame = -3
Query: 483 LSDEEAEDVLFKQAWLLYFWRRALFNGV-EDVAEERLQFWISRSGQTPTSRDAVDVEQGL 307
L+ +E E+V+ K+ WL +W A G+ D+A + ++W S P + V
Sbjct: 314 LTQKEMEEVVLKRCWLARYWGLASRYGICSDIATSKYEYW---SSLAPLPFEIV------ 364
Query: 306 LELKKLGIEQKLWEASRKETDQPPSLPADNHKLSTESEASS 184
L QK E +E ++ L D + L+ E S
Sbjct: 365 -----LSAGQKAKEEKSEENEKRSQLVQDINDLTGEGNIES 400
>pir||T49282 hypothetical protein T21J18.130 - Arabidopsis thaliana
gi|7576224|emb|CAB87914.1| putative protein [Arabidopsis
thaliana]
Length = 609
Score = 109 bits (273), Expect = 1e-23
Identities = 55/87 (63%), Positives = 67/87 (76%), Gaps = 3/87 (3%)
Frame = -3
Query: 447 QAWLLYFWRRALFNGVED-VAEERLQFWISRSG--QTPTSRDAVDVEQGLLELKKLGIEQ 277
QAWL+YFW RA +GVED +AEER+Q WISRS TS DA+DVE+GL+EL+KLGIEQ
Sbjct: 523 QAWLMYFWGRAKLHGVEDDIAEERVQLWISRSSGKSQTTSHDALDVERGLIELRKLGIEQ 582
Query: 276 KLWEASRKETDQPPSLPADNHKLSTES 196
+LWEASR+E DQ PS + NH L +S
Sbjct: 583 QLWEASRREIDQLPSPTSSNHDLDADS 609
Score = 34.3 bits (77), Expect = 0.77
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 483 LSDEEAEDVLFKQAWLLYFWRRALFNGV-EDVAEERLQFW 367
L+ +E E+V+ K+ WL +W A+ +G+ D+A R + W
Sbjct: 338 LTQDEMEEVVLKRCWLARYWGLAVQHGICADIAPSRQEHW 377
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,450,078
Number of Sequences: 1393205
Number of extensions: 8092721
Number of successful extensions: 22892
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 22257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22868
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 14271597018
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
