Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010014A_C01 KMC010014A_c01
(548 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199201.1| putative protein; protein id: At5g43880.1 [Arab... 70 1e-11
ref|NP_567819.1| putative protein; protein id: At4g28760.1, supp... 57 2e-07
pir||T04523 hypothetical protein F16A16.130 - Arabidopsis thalia... 57 2e-07
pir||S39206 proline-rich protein V-beta 1 precursor - rat gi|433... 38 0.092
gb|AAF04257.1| subtilisin-like serine protease [Neospora caninum] 37 0.12
>ref|NP_199201.1| putative protein; protein id: At5g43880.1 [Arabidopsis thaliana]
gi|8953749|dbj|BAA98068.1|
gene_id:F6B6.2~pir||T04523~similar to unknown protein
[Arabidopsis thaliana] gi|22136044|gb|AAM91604.1|
putative protein [Arabidopsis thaliana]
Length = 836
Score = 70.5 bits (171), Expect = 1e-11
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Frame = -1
Query: 548 QKLVFDFVNAALLEI--GYDGPENHLKRRMYSGSHFRPLVVK--QECGGSPPILVDHIVG 381
+ LVFD VN LLE+ Y GP + + SG V+ QEC L + G
Sbjct: 713 KNLVFDLVNTLLLELTPSYLGPRS--SPMILSGKPLGVYVINRMQEC------LTGN--G 762
Query: 380 QMKELMWEDCGDNPSLVVESVVRKEAVKVGWVELMRLEIDVLGSEIEGKLIQELVENAVV 201
++++ W++ GD SL V VVR E ++G E +RLE+D +G E+E KL++ELVE A++
Sbjct: 763 RVEDRWWDEDGDLSSLAVNKVVRIEVAEIGSQESLRLEMDSMGEELELKLLEELVEEALM 822
Query: 200 DLT 192
DL+
Sbjct: 823 DLS 825
>ref|NP_567819.1| putative protein; protein id: At4g28760.1, supported by cDNA:
gi_15293152, supported by cDNA: gi_21281094 [Arabidopsis
thaliana] gi|15293153|gb|AAK93687.1| unknown protein
[Arabidopsis thaliana] gi|21281095|gb|AAM44897.1| unknown
protein [Arabidopsis thaliana]
Length = 924
Score = 56.6 bits (135), Expect = 2e-07
Identities = 34/78 (43%), Positives = 48/78 (60%), Gaps = 8/78 (10%)
Frame = -1
Query: 401 LVDHIVGQMKELMWE-----DCG---DNPSLVVESVVRKEAVKVGWVELMRLEIDVLGSE 246
LV+H+ Q+K+ + + D G D SL ES+V+ E V W +++EID G E
Sbjct: 846 LVEHVWAQLKDWVSDEPSKRDSGEDMDANSLAAESLVKDEIVGRTWTHSLQVEIDDFGIE 905
Query: 245 IEGKLIQELVENAVVDLT 192
IE +L+QELVE AV+DLT
Sbjct: 906 IEKRLLQELVEEAVIDLT 923
>pir||T04523 hypothetical protein F16A16.130 - Arabidopsis thaliana
gi|4218122|emb|CAA22976.1| putative protein [Arabidopsis
thaliana] gi|7269731|emb|CAB81464.1| putative protein
[Arabidopsis thaliana]
Length = 880
Score = 56.6 bits (135), Expect = 2e-07
Identities = 34/78 (43%), Positives = 48/78 (60%), Gaps = 8/78 (10%)
Frame = -1
Query: 401 LVDHIVGQMKELMWE-----DCG---DNPSLVVESVVRKEAVKVGWVELMRLEIDVLGSE 246
LV+H+ Q+K+ + + D G D SL ES+V+ E V W +++EID G E
Sbjct: 802 LVEHVWAQLKDWVSDEPSKRDSGEDMDANSLAAESLVKDEIVGRTWTHSLQVEIDDFGIE 861
Query: 245 IEGKLIQELVENAVVDLT 192
IE +L+QELVE AV+DLT
Sbjct: 862 IEKRLLQELVEEAVIDLT 879
>pir||S39206 proline-rich protein V-beta 1 precursor - rat
gi|433617|emb|CAA52300.1| ORF1 [Rattus rattus]
gi|471332|emb|CAA54831.1| PR-Vbeta1 [Rattus norvegicus]
Length = 148
Score = 37.7 bits (86), Expect = 0.092
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +2
Query: 239 PLSHSPKHQSPTS*AQPTPPSQLLS*QHSLP---PGWGCPHNPPTLTPSFGPQCGPP 400
P H P+ + P P PP Q P PG+G P PP P FGP GPP
Sbjct: 26 PRGHDPRRRPPPPPPPPPPPFGPGIGQPPPPHFGPGFGPPPPPPPPPPPFGPGFGPP 82
>gb|AAF04257.1| subtilisin-like serine protease [Neospora caninum]
Length = 865
Score = 37.4 bits (85), Expect = 0.12
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Frame = +2
Query: 197 NQPQHFPQALVSTSPLSHSPKHQSP-TS*AQPTPPSQLLS*QHSLPPGWGCPH------N 355
N P H P ++ P S P Q P +P PP S PP W PH N
Sbjct: 554 NPPSHPPPE--ASPPESSPPDRQHPHPHPPRPNPPEA--SPPEPSPPNWQHPHPHPPRPN 609
Query: 356 PPTLTPSFGPQCGPPKWEEIH 418
PP +P P+ PP W+ H
Sbjct: 610 PPEASP---PEPSPPNWQHPH 627
Score = 34.7 bits (78), Expect = 0.78
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
Frame = +2
Query: 239 PLSHSPKHQSPTS*AQPTPPSQLLS*QHSLPPGWGCPH------NPPTLTPSFGPQCGPP 400
P H P+ P A P PS PP W PH NPP +P P+ PP
Sbjct: 601 PHPHPPRPNPPE--ASPPEPS---------PPNWQHPHPHPPRPNPPGASP---PESSPP 646
Query: 401 KWEEIH 418
W+ H
Sbjct: 647 NWQHPH 652
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,987,057
Number of Sequences: 1393205
Number of extensions: 13176255
Number of successful extensions: 43677
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 39868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43010
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
