Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009888A_C01 KMC009888A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC48393.1| putative aminoaldehyde dehydrogenase [Pisum sati... 166 2e-40
ref|NP_190400.1| betaine aldehyde dehydrogenase-like protein; pr... 157 6e-38
emb|CAC48392.2| aminoaldehyde dehydrogenase [Pisum sativum] 148 5e-35
sp|O24174|DHAB_ORYSA Betaine-aldehyde dehydrogenase (BADH) gi|74... 145 2e-34
dbj|BAB18544.1| betaine aldehyde dehydrogenase [Avicennia marina] 145 3e-34
>emb|CAC48393.1| putative aminoaldehyde dehydrogenase [Pisum sativum]
Length = 503
Score = 166 bits (419), Expect = 2e-40
Identities = 71/75 (94%), Positives = 75/75 (99%)
Frame = -2
Query: 533 DLERCDRITKAFKAGIVWVNCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQY 354
DLERC+R+TKAFKAGIVWVNCSQPCFTQAPWGG+KRSGFGRELGEWGLDNYLSVKQVTQY
Sbjct: 429 DLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQY 488
Query: 353 ISDEPWGWYQPPAKL 309
IS+EPWGWYQPPAKL
Sbjct: 489 ISEEPWGWYQPPAKL 503
>ref|NP_190400.1| betaine aldehyde dehydrogenase-like protein; protein id:
At3g48170.1, supported by cDNA: gi_13878140, supported
by cDNA: gi_17104544 [Arabidopsis thaliana]
gi|7431494|pir||T13006 betaine aldehyde dehydrogenase
homolog T24C20.50 - Arabidopsis thaliana
gi|5541723|emb|CAB51064.1| betaine aldehyde
dehydrogenase-like protein [Arabidopsis thaliana]
gi|13878141|gb|AAK44148.1|AF370333_1 putative betaine
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17104545|gb|AAL34161.1| putative betaine aldehyde
dehydrogenase [Arabidopsis thaliana]
Length = 503
Score = 157 bits (398), Expect = 6e-38
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = -2
Query: 533 DLERCDRITKAFKAGIVWVNCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQY 354
DLERCDR++KAF+AGIVWVNCSQPCF QAPWGG KRSGFGRELGEWGL+NYLSVKQVTQY
Sbjct: 429 DLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQY 488
Query: 353 ISDEPWGWYQPPAKL 309
ISDEPWGWY+PP+KL
Sbjct: 489 ISDEPWGWYKPPSKL 503
>emb|CAC48392.2| aminoaldehyde dehydrogenase [Pisum sativum]
Length = 503
Score = 148 bits (373), Expect = 5e-35
Identities = 62/75 (82%), Positives = 71/75 (94%)
Frame = -2
Query: 533 DLERCDRITKAFKAGIVWVNCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQY 354
DLERC+R++KA +AGIVW+NC+QP F QAPWGGIKRSGFGRELGEWGL+NYLSVKQVT+Y
Sbjct: 429 DLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVTRY 488
Query: 353 ISDEPWGWYQPPAKL 309
SDEPWGWYQPP+KL
Sbjct: 489 TSDEPWGWYQPPSKL 503
>sp|O24174|DHAB_ORYSA Betaine-aldehyde dehydrogenase (BADH) gi|7431452|pir||T03394
probable betaine-aldehyde dehydrogenase (EC 1.2.1.8) -
rice gi|2244604|dbj|BAA21098.1| betaine aldehyde
dehydrogenase [Oryza sativa (japonica cultivar-group)]
gi|21741985|emb|CAD41035.1| OSJNBa0060P14.6 [Oryza
sativa (japonica cultivar-group)]
Length = 505
Score = 145 bits (367), Expect = 2e-34
Identities = 61/75 (81%), Positives = 71/75 (94%)
Frame = -2
Query: 533 DLERCDRITKAFKAGIVWVNCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQY 354
DLERC+RI+KA ++GIVW+NCSQPCF QAPWGG KRSGFGRELG+WGLDNYLSVKQVT+Y
Sbjct: 431 DLERCERISKAIQSGIVWINCSQPCFVQAPWGGNKRSGFGRELGQWGLDNYLSVKQVTKY 490
Query: 353 ISDEPWGWYQPPAKL 309
SDEP+GWY+PP+KL
Sbjct: 491 CSDEPYGWYRPPSKL 505
>dbj|BAB18544.1| betaine aldehyde dehydrogenase [Avicennia marina]
Length = 502
Score = 145 bits (366), Expect = 3e-34
Identities = 61/75 (81%), Positives = 70/75 (93%)
Frame = -2
Query: 533 DLERCDRITKAFKAGIVWVNCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQY 354
DLERC+R+TKAF+AGIVWVNCSQPCF QAPWGG KRSGFGR+LGEWGLDNYL+VKQVT+Y
Sbjct: 428 DLERCERMTKAFQAGIVWVNCSQPCFCQAPWGGKKRSGFGRDLGEWGLDNYLNVKQVTRY 487
Query: 353 ISDEPWGWYQPPAKL 309
+S EPW WY+ P+KL
Sbjct: 488 VSSEPWDWYKSPSKL 502
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 456,189,159
Number of Sequences: 1393205
Number of extensions: 9500758
Number of successful extensions: 26407
Number of sequences better than 10.0: 829
Number of HSP's better than 10.0 without gapping: 25259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26372
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
