>KMC009881A_C01 KMC009881A_c01
atggaaacacttcacgaaaaatgttcataagtaacataaaatccattgcatgataAAAAC
TGTCTCAAGGGATTTTGCATATGACACACTTAGGACCAAATATTTGACAGAATATCTTGG
TTAGAAACAAGAGTTAATTTTCAGAGCCATTCACCAGTCATACATTTTGATTTTGCCAAG
AAGCATCAACCTAGCTACACAGGTTGGGCATGCAAACTCCACCTTCAGGGTTTTGCTGTT
CTTTCCATATCCTTCCTGTTACTCGTAACTTCAACTCTTTCCTGTCCCCACCTGAGAAGA
AAAGTGCCATGTTACGGTATATGATGAGGCCATCATGACTGTCTCTCACTTTCTTATGGC
TATCTCTAATGCTTCTTGGACTCCCCTCAAAAGTAAGTTTACGTCCATTGCCTCCAACCT
CCAAGCTATAGCTGTAGTTCCGGGCCTCTCTTTCGTCTCCCATGAACCGAAGGAATGCCA
TGTAAACAGGAGCTGTACCGAGCTGGAAGGCTTCAAAATGGAGGCAAAAATACTGACCAA
AGCAATGGAAAACCGTTAGCATCCATGTAGCATTTTCTACTTCCATG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC009881A_C01 KMC009881A_c01
         (587 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA96602.1| unnamed protein product [Oryza sativa (japonica ...   245  3e-64
ref|NP_200148.2| developmental protein SINA (seven in absentia);...   242  3e-63
dbj|BAB09798.1| developmental protein SINA (seven in absentia) [...   242  3e-63
gb|AAM11573.1|AF480944_1 ring finger E3 ligase SINAT5 [Arabidops...   241  6e-63
ref|NP_194517.1| putative zinc finger protein; protein id: At4g2...   236  1e-61

>dbj|BAA96602.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
          Length = 381

 Score =  245 bits (626), Expect = 3e-64
 Identities = 114/130 (87%), Positives = 122/130 (93%)
 Frame = -2

Query: 583 EVENATWMLTVFHCFGQYFCLHFEAFQLGTAPVYMAFLRFMGDEREARNYSYSLEVGGNG 404
           EVENATWMLTVFHCFGQYFCLHFEAFQLG APVYMAFLRFMGDE EARNYSYSLEVG NG
Sbjct: 253 EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANG 312

Query: 403 RKLTFEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQQNPE 224
           RK+ +EG+PRS+RDSH+KVRDSHDGLII RNMALFFSGGDRKELKLR+TGRIWKEQQ P+
Sbjct: 313 RKMVWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRITGRIWKEQQTPD 372

Query: 223 GGVCMPNLCS 194
            G C+PNLCS
Sbjct: 373 -GACIPNLCS 381

>ref|NP_200148.2| developmental protein SINA (seven in absentia); protein id:
           At5g53360.1, supported by cDNA: gi_20136189 [Arabidopsis
           thaliana] gi|26449935|dbj|BAC42088.1| putative ring
           finger E3 ligase SINAT5 [Arabidopsis thaliana]
           gi|28973205|gb|AAO63927.1| putative developmental
           protein SINA (seven in absentia) [Arabidopsis thaliana]
          Length = 233

 Score =  242 bits (617), Expect = 3e-63
 Identities = 111/130 (85%), Positives = 123/130 (94%)
 Frame = -2

Query: 583 EVENATWMLTVFHCFGQYFCLHFEAFQLGTAPVYMAFLRFMGDEREARNYSYSLEVGGNG 404
           EVENATWMLTVF CFGQYFCLHFEAFQLG APVYMAFLRFMGDE +ARNY+YSLEVGG+G
Sbjct: 103 EVENATWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSG 162

Query: 403 RKLTFEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQQNPE 224
           RK T+EG+PRS+RDSH+KVRDSHDGLII RNMALFFSGGD+KELKLRVTGRIWKEQQNP+
Sbjct: 163 RKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQQNPD 222

Query: 223 GGVCMPNLCS 194
            GVC+ ++CS
Sbjct: 223 SGVCITSMCS 232

>dbj|BAB09798.1| developmental protein SINA (seven in absentia) [Arabidopsis
           thaliana]
          Length = 263

 Score =  242 bits (617), Expect = 3e-63
 Identities = 111/130 (85%), Positives = 123/130 (94%)
 Frame = -2

Query: 583 EVENATWMLTVFHCFGQYFCLHFEAFQLGTAPVYMAFLRFMGDEREARNYSYSLEVGGNG 404
           EVENATWMLTVF CFGQYFCLHFEAFQLG APVYMAFLRFMGDE +ARNY+YSLEVGG+G
Sbjct: 133 EVENATWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSG 192

Query: 403 RKLTFEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQQNPE 224
           RK T+EG+PRS+RDSH+KVRDSHDGLII RNMALFFSGGD+KELKLRVTGRIWKEQQNP+
Sbjct: 193 RKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQQNPD 252

Query: 223 GGVCMPNLCS 194
            GVC+ ++CS
Sbjct: 253 SGVCITSMCS 262

>gb|AAM11573.1|AF480944_1 ring finger E3 ligase SINAT5 [Arabidopsis thaliana]
          Length = 309

 Score =  241 bits (614), Expect = 6e-63
 Identities = 110/130 (84%), Positives = 123/130 (94%)
 Frame = -2

Query: 583 EVENATWMLTVFHCFGQYFCLHFEAFQLGTAPVYMAFLRFMGDEREARNYSYSLEVGGNG 404
           EVENATWMLTVF CFGQYFCLHFEAFQLG APVYMAFLRFMGDE +ARNY+YSLEVGG+G
Sbjct: 179 EVENATWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSG 238

Query: 403 RKLTFEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQQNPE 224
           RK T+EG+PRS+RDSH+KVRDSHDGLII +NMALFFSGGD+KELKLRVTGRIWKEQQNP+
Sbjct: 239 RKQTWEGTPRSVRDSHRKVRDSHDGLIIQKNMALFFSGGDKKELKLRVTGRIWKEQQNPD 298

Query: 223 GGVCMPNLCS 194
            GVC+ ++CS
Sbjct: 299 SGVCITSMCS 308

>ref|NP_194517.1| putative zinc finger protein; protein id: At4g27880.1 [Arabidopsis
           thaliana] gi|7487472|pir||T09027 hypothetical protein
           T27E11.120 - Arabidopsis thaliana
           gi|4972119|emb|CAB43976.1| putative zinc finger protein
           [Arabidopsis thaliana] gi|7269641|emb|CAB81437.1|
           putative zinc finger protein [Arabidopsis thaliana]
          Length = 327

 Score =  236 bits (603), Expect = 1e-61
 Identities = 110/130 (84%), Positives = 122/130 (93%)
 Frame = -2

Query: 583 EVENATWMLTVFHCFGQYFCLHFEAFQLGTAPVYMAFLRFMGDEREARNYSYSLEVGGNG 404
           EVENATWMLTVFHCFGQYFCLHFEAFQLG  PVYMAFLRFMGDE +AR+YSYSLEVGG+G
Sbjct: 197 EVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEDARSYSYSLEVGGSG 256

Query: 403 RKLTFEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQQNPE 224
           RKLT+EG+PRSIRDSH+KVRDS+DGLII RNMALFFSGGDRKELKLRVTG+IWKEQ +P+
Sbjct: 257 RKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRVTGKIWKEQHSPD 316

Query: 223 GGVCMPNLCS 194
            G+ +PNL S
Sbjct: 317 SGLSIPNLSS 326

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 526,754,938
Number of Sequences: 1393205
Number of extensions: 11480112
Number of successful extensions: 26846
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 26193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26835
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MR032f02_f BP078477 1 393 2 SPDL014h10_f BP052897 53 587

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