Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009873A_C01 KMC009873A_c01
(804 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177578.1| putative alpha galactosyltransferase; protein i... 235 2e-74
ref|NP_173304.1| alpha galactosyltransferase, putative; protein ... 234 1e-71
pir||F86320 hypothetical protein F6A14.20 - Arabidopsis thaliana... 234 1e-71
ref|NP_196389.1| alpha galactosyltransferase protein; protein id... 238 2e-67
ref|NP_567241.1| putative glycosyltransferase; protein id: At4g0... 199 5e-58
>ref|NP_177578.1| putative alpha galactosyltransferase; protein id: At1g74380.1,
supported by cDNA: gi_20260551 [Arabidopsis thaliana]
gi|25349321|pir||E96772 hypothetical protein F1M20.6
[imported] - Arabidopsis thaliana
gi|12324812|gb|AAG52374.1|AC011765_26 putative alpha
galactosyltransferase; 16168-17541 [Arabidopsis
thaliana] gi|20260552|gb|AAM13174.1| putative alpha
galactosyltransferase [Arabidopsis thaliana]
Length = 457
Score = 235 bits (600), Expect(3) = 2e-74
Identities = 105/124 (84%), Positives = 115/124 (92%)
Frame = -3
Query: 739 KILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMLE 560
K+LTA LKGRPAFEADDQSALIYLLLS+K+ WM+KVF+EN YYLHG+W GLVDRYEEM+E
Sbjct: 303 KVLTAYLKGRPAFEADDQSALIYLLLSQKDTWMEKVFVENQYYLHGFWEGLVDRYEEMIE 362
Query: 559 KYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGV 380
KYHPGLGDERWPFVTHFVGCKPCGSY DY VERCL SMERAFNFADNQVLKLYGF HRG+
Sbjct: 363 KYHPGLGDERWPFVTHFVGCKPCGSYADYAVERCLKSMERAFNFADNQVLKLYGFSHRGL 422
Query: 379 VEPQ 368
+ P+
Sbjct: 423 LSPK 426
Score = 48.1 bits (113), Expect(3) = 2e-74
Identities = 22/24 (91%), Positives = 24/24 (99%)
Frame = -1
Query: 384 GLLSPKIKRIRNETVTPLEFVDQF 313
GLLSPKIKRIRNETV+PLEFVD+F
Sbjct: 421 GLLSPKIKRIRNETVSPLEFVDKF 444
Score = 39.7 bits (91), Expect(3) = 2e-74
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -1
Query: 795 ICDDWAPMGPKGPIREEAGR 736
+ D WAPMGPKGPIR+EAG+
Sbjct: 284 LLDAWAPMGPKGPIRDEAGK 303
>ref|NP_173304.1| alpha galactosyltransferase, putative; protein id: At1g18690.1
[Arabidopsis thaliana]
Length = 632
Score = 234 bits (596), Expect(3) = 1e-71
Identities = 104/124 (83%), Positives = 115/124 (91%)
Frame = -3
Query: 739 KILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMLE 560
KILTA LKGRPAFEADDQSALIYLLLS+KEKW++KV++EN YYLHG+W GLVDRYEEM+E
Sbjct: 480 KILTAYLKGRPAFEADDQSALIYLLLSQKEKWIEKVYVENQYYLHGFWEGLVDRYEEMIE 539
Query: 559 KYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGV 380
KYHPGLGDERWPFVTHFVGCKPCGSY DY V+RC SMERAFNFADNQVLKLYGF HRG+
Sbjct: 540 KYHPGLGDERWPFVTHFVGCKPCGSYADYAVDRCFKSMERAFNFADNQVLKLYGFSHRGL 599
Query: 379 VEPQ 368
+ P+
Sbjct: 600 LSPK 603
Score = 45.1 bits (105), Expect(3) = 1e-71
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -1
Query: 384 GLLSPKIKRIRNETVTPLEFVDQF 313
GLLSPKIKRIRNETV+PLE VD+F
Sbjct: 598 GLLSPKIKRIRNETVSPLESVDKF 621
Score = 35.0 bits (79), Expect(3) = 1e-71
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1
Query: 795 ICDDWAPMGPKGPIREEAGR 736
+ D WAPMGPKG IR+E G+
Sbjct: 461 LLDAWAPMGPKGKIRDETGK 480
>pir||F86320 hypothetical protein F6A14.20 - Arabidopsis thaliana
gi|6730715|gb|AAF27110.1|AC011809_19 Similar to
galactosyltransferase [Arabidopsis thaliana]
Length = 513
Score = 234 bits (596), Expect(3) = 1e-71
Identities = 104/124 (83%), Positives = 115/124 (91%)
Frame = -3
Query: 739 KILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMLE 560
KILTA LKGRPAFEADDQSALIYLLLS+KEKW++KV++EN YYLHG+W GLVDRYEEM+E
Sbjct: 361 KILTAYLKGRPAFEADDQSALIYLLLSQKEKWIEKVYVENQYYLHGFWEGLVDRYEEMIE 420
Query: 559 KYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGV 380
KYHPGLGDERWPFVTHFVGCKPCGSY DY V+RC SMERAFNFADNQVLKLYGF HRG+
Sbjct: 421 KYHPGLGDERWPFVTHFVGCKPCGSYADYAVDRCFKSMERAFNFADNQVLKLYGFSHRGL 480
Query: 379 VEPQ 368
+ P+
Sbjct: 481 LSPK 484
Score = 45.1 bits (105), Expect(3) = 1e-71
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -1
Query: 384 GLLSPKIKRIRNETVTPLEFVDQF 313
GLLSPKIKRIRNETV+PLE VD+F
Sbjct: 479 GLLSPKIKRIRNETVSPLESVDKF 502
Score = 35.0 bits (79), Expect(3) = 1e-71
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1
Query: 795 ICDDWAPMGPKGPIREEAGR 736
+ D WAPMGPKG IR+E G+
Sbjct: 342 LLDAWAPMGPKGKIRDETGK 361
>ref|NP_196389.1| alpha galactosyltransferase protein; protein id: At5g07720.1
[Arabidopsis thaliana] gi|9716848|emb|CAC01676.1|
putative golgi glycosyltransferase [Arabidopsis
thaliana] gi|9759594|dbj|BAB11451.1| alpha
galactosyltransferase protein [Arabidopsis thaliana]
Length = 457
Score = 238 bits (607), Expect(2) = 2e-67
Identities = 106/124 (85%), Positives = 116/124 (93%)
Frame = -3
Query: 739 KILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMLE 560
KILTANLKGRPAFEADDQSALIYLLLS+KE WM+KVF+EN YYLHG+W GLVD+YEEM+E
Sbjct: 302 KILTANLKGRPAFEADDQSALIYLLLSQKETWMEKVFVENQYYLHGFWEGLVDKYEEMME 361
Query: 559 KYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGV 380
KYHPGLGDERWPF+THFVGCKPCGSY DY VERCL SMERAFNFADNQVLKLYGF HRG+
Sbjct: 362 KYHPGLGDERWPFITHFVGCKPCGSYADYAVERCLKSMERAFNFADNQVLKLYGFGHRGL 421
Query: 379 VEPQ 368
+ P+
Sbjct: 422 LSPK 425
Score = 45.8 bits (107), Expect = 7e-04
Identities = 22/29 (75%), Positives = 24/29 (81%)
Frame = -1
Query: 399 GSGTVGLLSPKIKRIRNETVTPLEFVDQF 313
G G GLLSPKIKRIRNET PL+FVD+F
Sbjct: 415 GFGHRGLLSPKIKRIRNETTFPLKFVDRF 443
Score = 40.8 bits (94), Expect(2) = 2e-67
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -1
Query: 795 ICDDWAPMGPKGPIREEAGR 736
+ D WAPMGPKGPIREEAG+
Sbjct: 283 LLDAWAPMGPKGPIREEAGK 302
>ref|NP_567241.1| putative glycosyltransferase; protein id: At4g02500.1, supported by
cDNA: gi_16209668 [Arabidopsis thaliana]
gi|7487013|pir||T01300 hypothetical protein T14P8.23 -
Arabidopsis thaliana gi|3193287|gb|AAC19271.1|
Arabidopsis predicted protein of unknown function
T10P11.19 (GB:AC002330) [Arabidopsis thaliana]
gi|9716844|emb|CAC01674.1| putative golgi
glycosyltransferase [Arabidopsis thaliana]
gi|16209669|gb|AAL14393.1| AT4g02500/T10P11_20
[Arabidopsis thaliana] gi|22655160|gb|AAM98170.1|
putative glycosyltransferase [Arabidopsis thaliana]
Length = 461
Score = 199 bits (507), Expect(3) = 5e-58
Identities = 83/120 (69%), Positives = 101/120 (84%)
Frame = -3
Query: 739 KILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMLE 560
K+LT LK RP FEADDQSA++YLL ++++ W +KV+LE+ YYLHGYW LVDRYEEM+E
Sbjct: 303 KVLTRELKDRPVFEADDQSAMVYLLATQRDAWGNKVYLESGYYLHGYWGILVDRYEEMIE 362
Query: 559 KYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGV 380
YHPGLGD RWP VTHFVGCKPCG +GDYPVERCL M+RAFNF DNQ+L++YGF H+ +
Sbjct: 363 NYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSL 422
Score = 38.1 bits (87), Expect(3) = 5e-58
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -1
Query: 795 ICDDWAPMGPKGPIREEAGR 736
+ D WAPMGPKG IREEAG+
Sbjct: 284 LLDTWAPMGPKGKIREEAGK 303
Score = 30.4 bits (67), Expect(3) = 5e-58
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 381 LLSPKIKRIRNETVTPLEFVDQ 316
L S K+KR+RNET PLE D+
Sbjct: 422 LASRKVKRVRNETSNPLEMKDE 443
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 770,974,916
Number of Sequences: 1393205
Number of extensions: 19158006
Number of successful extensions: 57931
Number of sequences better than 10.0: 197
Number of HSP's better than 10.0 without gapping: 51622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56588
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 40896270532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
