Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009868A_C01 KMC009868A_c01
(702 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_680448.1| similar to putative protein kinase; protein id:... 44 0.002
ref|NP_180014.1| putative protein kinase; protein id: At2g24370.... 36 0.46
dbj|BAB09000.1| contains similarity to receptor-like protein kin... 34 1.7
ref|NP_200964.1| putative protein; protein id: At5g61560.1 [Arab... 34 1.7
ref|NP_179531.1| putative protein kinase; protein id: At2g19410.... 34 2.3
>ref|NP_680448.1| similar to putative protein kinase; protein id: At5g57035.1
[Arabidopsis thaliana]
Length = 786
Score = 44.3 bits (103), Expect = 0.002
Identities = 22/35 (62%), Positives = 25/35 (70%), Gaps = 7/35 (20%)
Frame = -1
Query: 405 GCGKIYKCNLDHTPVALKIL-------YEEFLKRI 322
G GK+YKC+LDHTPVALK+L EEFLK I
Sbjct: 432 GYGKVYKCSLDHTPVALKVLKPDSVEKKEEFLKEI 466
>ref|NP_180014.1| putative protein kinase; protein id: At2g24370.1 [Arabidopsis
thaliana] gi|25412210|pir||H84635 probable protein
kinase [imported] - Arabidopsis thaliana
gi|4337196|gb|AAD18110.1| putative protein kinase
[Arabidopsis thaliana]
Length = 816
Score = 36.2 bits (82), Expect = 0.46
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1
Query: 405 GCGKIYKCNLDHTPVALKIL 346
G G +YKC LDHTPVA+K+L
Sbjct: 490 GYGPVYKCYLDHTPVAVKVL 509
>dbj|BAB09000.1| contains similarity to receptor-like protein kinase~gene_id:K11J9.9
[Arabidopsis thaliana]
Length = 763
Score = 34.3 bits (77), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1
Query: 405 GCGKIYKCNLDHTPVALKILYEE 337
G G +Y+CNL HT VA+K+L+ +
Sbjct: 406 GYGSVYRCNLHHTTVAVKVLHSD 428
>ref|NP_200964.1| putative protein; protein id: At5g61560.1 [Arabidopsis thaliana]
Length = 815
Score = 34.3 bits (77), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1
Query: 405 GCGKIYKCNLDHTPVALKILYEE 337
G G +Y+CNL HT VA+K+L+ +
Sbjct: 458 GYGSVYRCNLHHTTVAVKVLHSD 480
>ref|NP_179531.1| putative protein kinase; protein id: At2g19410.1 [Arabidopsis
thaliana] gi|7486244|pir||T01289 probable protein kinase
At2g19410 [imported] - Arabidopsis thaliana
gi|20197009|gb|AAM14871.1| putative protein kinase
[Arabidopsis thaliana]
Length = 801
Score = 33.9 bits (76), Expect = 2.3
Identities = 15/35 (42%), Positives = 23/35 (64%), Gaps = 7/35 (20%)
Frame = -1
Query: 405 GCGKIYKCNLDHTPVALKIL-------YEEFLKRI 322
G GK+Y+C+LD TP A+K++ +EFLK +
Sbjct: 452 GYGKVYQCSLDSTPAAVKVVRLDTPEKKQEFLKEV 486
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 552,825,056
Number of Sequences: 1393205
Number of extensions: 11404257
Number of successful extensions: 24773
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24726
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 32250355128
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
