Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009866A_C01 KMC009866A_c01
(763 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P31656|CADH_MEDSA Cinnamyl-alcohol dehydrogenase (CAD) gi|322... 421 e-117
sp|P42495|CAD1_ARACO Cinnamyl-alcohol dehydrogenase 1 (CAD) gi|4... 404 e-112
sp|P30359|CAD4_TOBAC Cinnamyl-alcohol dehydrogenase (CAD) gi|282... 399 e-110
gb|AAM65761.1| cinnamyl alcohol dehydrogenase [Arabidopsis thali... 395 e-109
ref|NP_188576.1| cinnamyl alcohol dehydrogenase; protein id: At3... 395 e-109
>sp|P31656|CADH_MEDSA Cinnamyl-alcohol dehydrogenase (CAD) gi|322704|pir||S31572
cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) - alfalfa
gi|19595|emb|CAA79625.1| cinnamyl alcohol dehydrogenase
[Medicago sativa] gi|3603399|gb|AAC35845.1|
cinnamyl-alcohol dehydrogenase [Medicago sativa]
Length = 358
Score = 421 bits (1081), Expect = e-117
Identities = 200/234 (85%), Positives = 218/234 (92%), Gaps = 1/234 (0%)
Frame = +1
Query: 64 MGSLEA-ERTTVGWAARDPSGILSPYTFTLRNTGPDDVYIKVHYCGVCHTDVHQVKNDLG 240
MGS+EA ERTTVG AA+DPSGIL+PYT+TLRNTGPDDVYIK+HYCGVCH+D+HQ+KNDLG
Sbjct: 1 MGSIEAAERTTVGLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLG 60
Query: 241 MSNYPMVPGHEVVGEVLEVGSDVTRFTVGEIVGAGLLVGCCKKCTACQSDIEQYCKKKIW 420
MSNYPMVPGHEVVGEVLEVGS+VTRF VGEIVG GLLVGCCK C AC S+IEQYC KKIW
Sbjct: 61 MSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIW 120
Query: 421 NYNDVYVDGKPTQGGFAETIIVEQKFVVKIPEGMAPEQVAPLLCAAVTVYSPLSHFGLKE 600
+YNDVY DGK TQGGFAE+ +VEQKFVVKIPEG+APEQVAPLLCA VTVYSPLSHFGLK
Sbjct: 121 SYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKT 180
Query: 601 SGLRGGILGLGGVGHMGVIIAKAMGHHVTVISSSDRKKKEAIEDLGADAYLVSS 762
GLRGGILGLGGVGHMGV +AKA+GHHVTVISSSD+KKKEA+EDLGAD YLVSS
Sbjct: 181 PGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSS 234
>sp|P42495|CAD1_ARACO Cinnamyl-alcohol dehydrogenase 1 (CAD) gi|474300|dbj|BAA03099.1|
cinnamyl alcohol dehydrogenase [Aralia cordata]
gi|745086|prf||2015401A cinnamoyl alcohol dehydrogenase
Length = 360
Score = 404 bits (1038), Expect = e-112
Identities = 187/234 (79%), Positives = 213/234 (90%), Gaps = 1/234 (0%)
Frame = +1
Query: 64 MGSLEAERTTVGWAARDPSGILSPYTFTLRNTGPDDVYIKVHYCGVCHTDVHQVKNDLGM 243
MGSLEAER T GWAARDPSG+LSPYT+TLR TGP+DV+IK+ YCG+CHTD+HQ+KNDLG
Sbjct: 1 MGSLEAERKTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGA 60
Query: 244 SNYPMVPGHEVVGEVLEVGSDVTRFTVGEIVGAGLLVGCCKKCTACQSDIEQYCKKKIWN 423
SNYPMVPGHEVVGEV+EVGSDVT+F VG+ VG G +VGCCK C C++D+EQYC KKIW+
Sbjct: 61 SNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWS 120
Query: 424 YNDVYVDGKPTQGGFAETIIVEQKFVVKIPEGMAPEQVAPLLCAAVTVYSPLSHFGLKE- 600
YNDVY DGKPTQGGF+ ++V+QKFVVKIP+GMAPEQ APLLCA VTVYSPL+HFGLKE
Sbjct: 121 YNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEI 180
Query: 601 SGLRGGILGLGGVGHMGVIIAKAMGHHVTVISSSDRKKKEAIEDLGADAYLVSS 762
SGLRGGILGLGGVGHMGV +AKAMGHHVTVISSSD+KK+EAI+ LGADAYLVSS
Sbjct: 181 SGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSS 234
>sp|P30359|CAD4_TOBAC Cinnamyl-alcohol dehydrogenase (CAD) gi|282955|pir||S23525
cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) CAD14 -
common tobacco gi|19839|emb|CAA44216.1| cinnamyl-alcohol
dehydrogenase [Nicotiana tabacum]
Length = 357
Score = 399 bits (1024), Expect = e-110
Identities = 183/233 (78%), Positives = 211/233 (90%)
Frame = +1
Query: 64 MGSLEAERTTVGWAARDPSGILSPYTFTLRNTGPDDVYIKVHYCGVCHTDVHQVKNDLGM 243
MG LE E+TT+GWAARDPSG+LSPYT+TLRNTGP+DV +KV YCG+CHTD+HQVKNDLGM
Sbjct: 1 MGGLEVEKTTIGWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGM 60
Query: 244 SNYPMVPGHEVVGEVLEVGSDVTRFTVGEIVGAGLLVGCCKKCTACQSDIEQYCKKKIWN 423
SNYP+VPGHEVVGEV+EVG DV++F VG+ VG GLLVG C+ C C+ DIEQYC KKIWN
Sbjct: 61 SNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWN 120
Query: 424 YNDVYVDGKPTQGGFAETIIVEQKFVVKIPEGMAPEQVAPLLCAAVTVYSPLSHFGLKES 603
NDVY DGKPTQGGFA++++V+QKFVVKIPEGMAPEQ APLLCA +TVYSPL+HFG K+S
Sbjct: 121 CNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQS 180
Query: 604 GLRGGILGLGGVGHMGVIIAKAMGHHVTVISSSDRKKKEAIEDLGADAYLVSS 762
GLRGGILGLGGVGHMGV IAKAMGHHVTVISSS++K++EA+E LGAD YLVSS
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSS 233
>gb|AAM65761.1| cinnamyl alcohol dehydrogenase [Arabidopsis thaliana]
Length = 365
Score = 395 bits (1014), Expect = e-109
Identities = 185/234 (79%), Positives = 211/234 (90%), Gaps = 1/234 (0%)
Frame = +1
Query: 64 MGSLEA-ERTTVGWAARDPSGILSPYTFTLRNTGPDDVYIKVHYCGVCHTDVHQVKNDLG 240
MGS+EA E+ +GWAARDPSG+LSPY++TLR+TG DDVYIKV CG+CHTD+HQ+KNDLG
Sbjct: 1 MGSVEAGEKKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLG 60
Query: 241 MSNYPMVPGHEVVGEVLEVGSDVTRFTVGEIVGAGLLVGCCKKCTACQSDIEQYCKKKIW 420
MSNYPMVPGHEVVGEVLEVGSDV++FTVG++VG G++VGCC C C S++EQYC K+IW
Sbjct: 61 MSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIW 120
Query: 421 NYNDVYVDGKPTQGGFAETIIVEQKFVVKIPEGMAPEQVAPLLCAAVTVYSPLSHFGLKE 600
+YNDVY DGKPTQGGFA+T+IV QKFVVKIPEGMA EQ APLLCA VTVYSPLSHFGL
Sbjct: 121 SYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMA 180
Query: 601 SGLRGGILGLGGVGHMGVIIAKAMGHHVTVISSSDRKKKEAIEDLGADAYLVSS 762
SGL+GGILGLGGVGHMGV IAKAMGHHVTVISSSD+KK+EAIE LGAD Y+VSS
Sbjct: 181 SGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSS 234
>ref|NP_188576.1| cinnamyl alcohol dehydrogenase; protein id: At3g19450.1, supported
by cDNA: 4357., supported by cDNA: gi_17104722
[Arabidopsis thaliana] gi|1345655|sp|P48523|CAD1_ARATH
Cinnamyl-alcohol dehydrogenase (CAD)
gi|757535|emb|CAA83508.1| cinnamyl alcohol dehydrogenase
[Arabidopsis thaliana] gi|11994468|dbj|BAB02470.1|
cinnamyl alcohol dehydrogenase 2 [Arabidopsis thaliana]
gi|13877997|gb|AAK44076.1|AF370261_1 putative cinnamyl
alcohol dehydrogenase [Arabidopsis thaliana]
gi|17104723|gb|AAL34250.1| putative cinnamyl alcohol
dehydrogenase [Arabidopsis thaliana]
Length = 365
Score = 395 bits (1014), Expect = e-109
Identities = 185/234 (79%), Positives = 211/234 (90%), Gaps = 1/234 (0%)
Frame = +1
Query: 64 MGSLEA-ERTTVGWAARDPSGILSPYTFTLRNTGPDDVYIKVHYCGVCHTDVHQVKNDLG 240
MGS+EA E+ +GWAARDPSG+LSPY++TLR+TG DDVYIKV CG+CHTD+HQ+KNDLG
Sbjct: 1 MGSVEAGEKKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLG 60
Query: 241 MSNYPMVPGHEVVGEVLEVGSDVTRFTVGEIVGAGLLVGCCKKCTACQSDIEQYCKKKIW 420
MSNYPMVPGHEVVGEVLEVGSDV++FTVG++VG G++VGCC C C S++EQYC K+IW
Sbjct: 61 MSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIW 120
Query: 421 NYNDVYVDGKPTQGGFAETIIVEQKFVVKIPEGMAPEQVAPLLCAAVTVYSPLSHFGLKE 600
+YNDVY DGKPTQGGFA+T+IV QKFVVKIPEGMA EQ APLLCA VTVYSPLSHFGL
Sbjct: 121 SYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMA 180
Query: 601 SGLRGGILGLGGVGHMGVIIAKAMGHHVTVISSSDRKKKEAIEDLGADAYLVSS 762
SGL+GGILGLGGVGHMGV IAKAMGHHVTVISSSD+KK+EAIE LGAD Y+VSS
Sbjct: 181 SGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSS 234
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 771,621,734
Number of Sequences: 1393205
Number of extensions: 19645766
Number of successful extensions: 85100
Number of sequences better than 10.0: 1741
Number of HSP's better than 10.0 without gapping: 70157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82361
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 36974710344
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
