Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009829A_C01 KMC009829A_c01
(489 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172514.1| serine/threonine protein phosphatase, PP2A; pro... 109 1e-23
sp|Q9XGT7|P2A3_ORYSA Serine/threonine protein phosphatase PP2A-3... 108 2e-23
dbj|BAA92698.1| type 2A protein phosphatase-2 [Vicia faba] 108 2e-23
dbj|BAA92697.1| type 2A protein phosphatase-1 [Vicia faba] 108 2e-23
sp|Q9ZSS3|P2A1_ORYSA Serine/threonine protein phosphatase PP2A-1... 108 2e-23
>ref|NP_172514.1| serine/threonine protein phosphatase, PP2A; protein id:
At1g10430.1, supported by cDNA: gi_16648954, supported
by cDNA: gi_166822, supported by cDNA: gi_20259837
[Arabidopsis thaliana] gi|585628|sp|Q07098|P2A1_ARATH
Serine/threonine protein phosphatase PP2A-1 catalytic
subunit gi|418779|pir||S31162 phosphoprotein phosphatase
(EC 3.1.3.16) 2A-alpha catalytic chain (clone EP14a) -
Arabidopsis thaliana gi|166823|gb|AAA32848.1| protein
phosphatase gi|5091535|gb|AAD39564.1|AC007067_4 T10O24.4
[Arabidopsis thaliana] gi|16648955|gb|AAL24329.1|
similar to protein phosphatase type 2A [Arabidopsis
thaliana] gi|20259838|gb|AAM13266.1| similar to protein
phosphatase type 2A [Arabidopsis thaliana]
Length = 306
Score = 109 bits (273), Expect = 1e-23
Identities = 49/51 (96%), Positives = 50/51 (97%)
Frame = -3
Query: 487 VFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRPIEPDTTRKTPDYFL 335
VFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPR +EPDTTRKTPDYFL
Sbjct: 256 VFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQVEPDTTRKTPDYFL 306
>sp|Q9XGT7|P2A3_ORYSA Serine/threonine protein phosphatase PP2A-3 catalytic subunit
gi|5231210|gb|AAD41126.1|AF159061_1 serine/threonine
protein phosphatase PP2A-3 catalytic subunit [Oryza
sativa (indica cultivar-group)]
Length = 307
Score = 108 bits (271), Expect = 2e-23
Identities = 49/51 (96%), Positives = 50/51 (97%)
Frame = -3
Query: 487 VFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRPIEPDTTRKTPDYFL 335
VFSAPNYCYRCGNMAAILEIGENM+QNFLQFDPAPR IEPDTTRKTPDYFL
Sbjct: 257 VFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 307
>dbj|BAA92698.1| type 2A protein phosphatase-2 [Vicia faba]
Length = 306
Score = 108 bits (271), Expect = 2e-23
Identities = 49/51 (96%), Positives = 50/51 (97%)
Frame = -3
Query: 487 VFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRPIEPDTTRKTPDYFL 335
VFSAPNYCYRCGNMAAILEIGENM+QNFLQFDPAPR IEPDTTRKTPDYFL
Sbjct: 256 VFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 306
>dbj|BAA92697.1| type 2A protein phosphatase-1 [Vicia faba]
Length = 306
Score = 108 bits (271), Expect = 2e-23
Identities = 49/51 (96%), Positives = 50/51 (97%)
Frame = -3
Query: 487 VFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRPIEPDTTRKTPDYFL 335
VFSAPNYCYRCGNMAAILEIGENM+QNFLQFDPAPR IEPDTTRKTPDYFL
Sbjct: 256 VFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 306
>sp|Q9ZSS3|P2A1_ORYSA Serine/threonine protein phosphatase PP2A-1 catalytic subunit
gi|3859548|gb|AAC72838.1| protein phosphatase 2A
catalytic subunit [Oryza sativa (indica cultivar-group)]
Length = 306
Score = 108 bits (271), Expect = 2e-23
Identities = 49/51 (96%), Positives = 50/51 (97%)
Frame = -3
Query: 487 VFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRPIEPDTTRKTPDYFL 335
VFSAPNYCYRCGNMAAILEIGENM+QNFLQFDPAPR IEPDTTRKTPDYFL
Sbjct: 256 VFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 306
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 441,844,709
Number of Sequences: 1393205
Number of extensions: 9391503
Number of successful extensions: 24347
Number of sequences better than 10.0: 295
Number of HSP's better than 10.0 without gapping: 23731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24326
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 14271597018
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
