Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009825A_C01 KMC009825A_c01
(569 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_680219.1| Expressed protein; protein id: At5g25265.1, sup... 211 4e-54
dbj|BAC22247.1| hypothetical protein~similar to Arabidopsis thal... 211 7e-54
ref|NP_196854.1| putative protein; protein id: At5g13500.1, supp... 202 2e-51
ref|NP_180098.1| unknown protein; protein id: At2g25260.1 [Arabi... 171 6e-42
ref|NP_566148.2| unknown protein; protein id: At3g01720.1, suppo... 46 4e-04
>ref|NP_680219.1| Expressed protein; protein id: At5g25265.1, supported by cDNA:
gi_17065061 [Arabidopsis thaliana]
gi|17065062|gb|AAL32685.1| Unknown protein [Arabidopsis
thaliana]
Length = 366
Score = 211 bits (538), Expect = 4e-54
Identities = 95/114 (83%), Positives = 105/114 (91%)
Frame = -1
Query: 566 DKAFGWVLEMYAYAVASALHGVRNILYKDFMIQPPWDKEIGKSYIIHYTYGCDYNMKGEL 387
DKAFGWVLEMYAYAV+SALHGV NIL+KDFMIQPPWD E+G YIIHYTYGCDY+MKG+L
Sbjct: 253 DKAFGWVLEMYAYAVSSALHGVSNILHKDFMIQPPWDIEVGDKYIIHYTYGCDYDMKGKL 312
Query: 386 TYGKIGEWRFDKRSYDHVAPPKNLTLPPPGVPESVVTLVKMVNEATASIPNWYS 225
TYGKIGEWRFDKRSYD PP+NLT+PPPGV +SVVTLVKM+NEATA+IPNW S
Sbjct: 313 TYGKIGEWRFDKRSYDSKPPPRNLTMPPPGVSQSVVTLVKMINEATANIPNWGS 366
>dbj|BAC22247.1| hypothetical protein~similar to Arabidopsis thaliana chromosome 5,
At5g25265 [Oryza sativa (japonica cultivar-group)]
Length = 364
Score = 211 bits (536), Expect = 7e-54
Identities = 97/115 (84%), Positives = 106/115 (91%)
Frame = -1
Query: 569 TDKAFGWVLEMYAYAVASALHGVRNILYKDFMIQPPWDKEIGKSYIIHYTYGCDYNMKGE 390
TDKAFGWVLEMYAYAVASALHGV NIL+K+FMIQPPWD EIG ++IIHYTYGCDY+MKG+
Sbjct: 246 TDKAFGWVLEMYAYAVASALHGVGNILHKEFMIQPPWDLEIGDAFIIHYTYGCDYDMKGK 305
Query: 389 LTYGKIGEWRFDKRSYDHVAPPKNLTLPPPGVPESVVTLVKMVNEATASIPNWYS 225
LTYGKIGEWRFDKRSYD PP+NL LPP GVP+SVVTLVKMVNEATA+IPNW S
Sbjct: 306 LTYGKIGEWRFDKRSYDSKPPPRNLPLPPNGVPQSVVTLVKMVNEATANIPNWDS 360
>ref|NP_196854.1| putative protein; protein id: At5g13500.1, supported by cDNA:
6674., supported by cDNA: gi_19699008 [Arabidopsis
thaliana] gi|9955542|emb|CAC05427.1| putative protein
[Arabidopsis thaliana] gi|19699009|gb|AAL91240.1|
putative protein [Arabidopsis thaliana]
gi|21594054|gb|AAM65972.1| unknown [Arabidopsis
thaliana] gi|23198096|gb|AAN15575.1| putative protein
[Arabidopsis thaliana]
Length = 358
Score = 202 bits (514), Expect = 2e-51
Identities = 91/113 (80%), Positives = 101/113 (88%)
Frame = -1
Query: 569 TDKAFGWVLEMYAYAVASALHGVRNILYKDFMIQPPWDKEIGKSYIIHYTYGCDYNMKGE 390
TDKAFGWVLEMY YA+ASA+HGVR+IL KDFM+QPPWD +IIHYTYGCDYNMKGE
Sbjct: 243 TDKAFGWVLEMYGYAIASAIHGVRHILRKDFMLQPPWDLSTKGKFIIHYTYGCDYNMKGE 302
Query: 389 LTYGKIGEWRFDKRSYDHVAPPKNLTLPPPGVPESVVTLVKMVNEATASIPNW 231
LTYGKIGEWRFDKRS+ PP+N++LPPPGVPESVVTLVKMVNEATA+IPNW
Sbjct: 303 LTYGKIGEWRFDKRSHLRGPPPRNMSLPPPGVPESVVTLVKMVNEATATIPNW 355
>ref|NP_180098.1| unknown protein; protein id: At2g25260.1 [Arabidopsis thaliana]
gi|25371351|pir||C84646 hypothetical protein At2g25260
[imported] - Arabidopsis thaliana
gi|4567251|gb|AAD23665.1| unknown protein [Arabidopsis
thaliana]
Length = 303
Score = 171 bits (433), Expect = 6e-42
Identities = 77/97 (79%), Positives = 86/97 (88%)
Frame = -1
Query: 569 TDKAFGWVLEMYAYAVASALHGVRNILYKDFMIQPPWDKEIGKSYIIHYTYGCDYNMKGE 390
TDKAFGWVLEMYAYAV+SALHGV NIL+KDFMIQPPWD E K++IIHYTYGCD++MKG+
Sbjct: 186 TDKAFGWVLEMYAYAVSSALHGVSNILHKDFMIQPPWDTETKKTFIIHYTYGCDFDMKGK 245
Query: 389 LTYGKIGEWRFDKRSYDHVAPPKNLTLPPPGVPESVV 279
+ GKIGEWRFDKRSY PP+NLTLPP GVPESVV
Sbjct: 246 MMVGKIGEWRFDKRSYGDKPPPRNLTLPPRGVPESVV 282
>ref|NP_566148.2| unknown protein; protein id: At3g01720.1, supported by cDNA:
gi_18175796, supported by cDNA: gi_20465700 [Arabidopsis
thaliana] gi|18175797|gb|AAL59929.1| unknown protein
[Arabidopsis thaliana] gi|20465701|gb|AAM20319.1|
unknown protein [Arabidopsis thaliana]
Length = 802
Score = 45.8 bits (107), Expect = 4e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = -1
Query: 554 GWVLEMYAYAVASALHGVRNILYKDFMIQPPWDKEIGKSYIIHYTYGCDYNMKGELTYGK 375
GW+ EMY Y+ +A +R+ + K+ MI P + E G Y + + YG ++ K
Sbjct: 585 GWISEMYGYSFGAAELNLRHSINKEIMIYPGYVPEPGADYRV-FHYGLEF---------K 634
Query: 374 IGEWRFDKRSY 342
+G W FDK ++
Sbjct: 635 VGNWSFDKANW 645
Score = 41.2 bits (95), Expect = 0.009
Identities = 26/93 (27%), Positives = 42/93 (44%), Gaps = 2/93 (2%)
Frame = -1
Query: 554 GWVLEMYAYAVASALHGVRNILYKDFMIQPPWDKEIGKSYIIHYTYGCDYNMKGELTYGK 375
GW+ EMY Y+ +A G+++ + D MI P + G ++ + YG ++
Sbjct: 223 GWISEMYGYSFGAAEAGLKHKINDDLMIYPGYVPREGVEPVLMH-YGLPFS--------- 272
Query: 374 IGEWRFDKRSY--DHVAPPKNLTLPPPGVPESV 282
IG W F K + D++ N P P P V
Sbjct: 273 IGNWSFTKLDHHEDNIVYDCNRLFPEPPYPREV 305
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 540,442,532
Number of Sequences: 1393205
Number of extensions: 12453189
Number of successful extensions: 35141
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 33774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35114
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20956655091
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
