Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009786A_C01 KMC009786A_c01
(602 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197604.1| putative protein; protein id: At5g21050.1 [Arab... 94 1e-18
ref|NP_201214.1| unknown protein; protein id: At5g64090.1 [Arabi... 84 1e-15
ref|XP_284442.1| similar to chromosome 15 open reading frame 2 [... 52 6e-06
gb|AAO52605.1| hypothetical protein [Dictyostelium discoideum] 51 1e-05
gb|AAG00551.1| retinitis pigmentosa GTPase regulator [Homo sapiens] 48 9e-05
>ref|NP_197604.1| putative protein; protein id: At5g21050.1 [Arabidopsis thaliana]
Length = 355
Score = 94.4 bits (233), Expect = 1e-18
Identities = 59/139 (42%), Positives = 86/139 (61%), Gaps = 8/139 (5%)
Frame = -2
Query: 553 ENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNR-----GKTE---GRVPLPWELLQ 398
E+CE+ + GE +QS +R LS++ R G++E GR+PLPWELLQ
Sbjct: 223 ESCEKWAGQN---GETEQS-SRAVIPTLSDDSWREEENVAIGGRSERDSGRIPLPWELLQ 278
Query: 397 PVMRILGHCLWGPSSNKDMELFEAASEACRSLFARAMHDVNPYAILPMRSLLRLSKSVVG 218
P++RILGHCL G +D EL EAA++AC+SL+ R++HD+NP AIL SLLRL + +
Sbjct: 279 PILRILGHCLLG-LKMEDRELSEAANKACQSLYLRSLHDINPKAILATGSLLRLREMAL- 336
Query: 217 NHVDDFDPPELPKTDVITL 161
+ + D EL V+++
Sbjct: 337 DPKNQIDHTELSNDTVLSV 355
>ref|NP_201214.1| unknown protein; protein id: At5g64090.1 [Arabidopsis thaliana]
gi|10176957|dbj|BAB10277.1| gene_id:MHJ24.7~unknown
protein [Arabidopsis thaliana]
Length = 448
Score = 84.3 bits (207), Expect = 1e-15
Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Frame = -2
Query: 463 EKQRSNRGKTEG-----RVPLPWELLQPVMRILGHCLWGPSSNKDMELFEAASEACRSLF 299
E+Q S+ G G R+PLPWEL QP +RILGHCL P + +D++ +AAS A RSL+
Sbjct: 332 EEQLSSNGGGGGVGRGVRIPLPWELFQPTLRILGHCLLSPLNTEDVK--DAASNAVRSLY 389
Query: 298 ARAMHDVNPYAILPMRSLLRLSKS 227
ARA HD+NP AIL RSL+ L S
Sbjct: 390 ARASHDLNPQAILATRSLVNLDTS 413
>ref|XP_284442.1| similar to chromosome 15 open reading frame 2 [Homo sapiens] [Mus
musculus]
Length = 1047
Score = 52.0 bits (123), Expect = 6e-06
Identities = 25/57 (43%), Positives = 34/57 (58%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEG 428
EEE E E+EEEE G + EEEG+EE G EE++ + E+ EE++ K EG
Sbjct: 183 EEEGEEEEEEEEKGEDEEEEEGEEEEGEDEEEEGEEEEEEEEEEEEEEEEEEEKEEG 239
Score = 44.3 bits (103), Expect = 0.001
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEG 428
EEE + EDEEEE G E EEG++E GEE++ + E+ EE+++ + EG
Sbjct: 191 EEEEKGEDEEEEEGEE---EEGEDEEEEGEEEEEEEEEEEEEEEEEEEKEEGEEEEG 244
Score = 43.9 bits (102), Expect = 0.002
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTE 431
EEE E E+EEEE E +EEG+EE G EE+ + E+ EEK+ + + E
Sbjct: 218 EEEEEEEEEEEEEEEEEEKEEGEEEEGEDEEEGEEEEEEEEEEGEEKEGEDEEEGE 273
Score = 42.0 bits (97), Expect = 0.006
Identities = 21/48 (43%), Positives = 29/48 (59%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQ 455
EEE E E+EEEE E EEE ++E G EE + G+ E+ EE++
Sbjct: 213 EEEGEEEEEEEEEEEEEEEEEEEKEEGEEEEGEDEEEGEEEEEEEEEE 260
Score = 41.2 bits (95), Expect = 0.010
Identities = 21/54 (38%), Positives = 31/54 (56%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGK 437
+EE E E+EEEE E EEE +EE GEE++ + + E+ EE++ K
Sbjct: 211 DEEEEGEEEEEEEEEEEEEEEEEEEKEEGEEEEGEDEEEGEEEEEEEEEEGEEK 264
Score = 40.4 bits (93), Expect = 0.018
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = -2
Query: 595 EESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTE 431
EE E EDEEEE GE EEE +EE EE++ + G+ E+ +E++ + E
Sbjct: 205 EEEEGEDEEEE--GEEEEEEEEEEEEEEEEEEEKEEGEEEEGEDEEEGEEEEEEE 257
Score = 40.4 bits (93), Expect = 0.018
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTE 431
EEE E E+EE E E EEE +EE GEE++ + E+ EE++ G+ E
Sbjct: 269 EEEGEEEEEEVEDEEEVGEEEEEEEEEEGEEEEEGEDKEVEEEEEEEKEEEEGEEE 324
Score = 39.7 bits (91), Expect = 0.030
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 598 EEESESEDEEEEVGGE----NCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTE 431
EEE E E+EEE+ GE EEEG+EE EE+ G+ E+ EE++ + E
Sbjct: 225 EEEEEEEEEEEKEEGEEEEGEDEEEGEEEEEEEEEEGEEKEGEDEEEGEEEEEEVEDEEE 284
Score = 38.5 bits (88), Expect = 0.068
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVG--EEKQSRNRGKTEDLSEEKQ 455
EEE E ++ E+E GE EEE ++E VG EE++ G+ E+ E+K+
Sbjct: 258 EEEGEEKEGEDEEEGEEEEEEVEDEEEVGEEEEEEEEEEGEEEEEGEDKE 307
Score = 38.5 bits (88), Expect = 0.068
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEG 428
EEE E E+EEEE GE E E +EE EE+ E+ EE++ + EG
Sbjct: 247 EEEGEEEEEEEEEEGEEKEGEDEEEGEEEEEEVEDEEEVGEEEEEEEEEEGEEEEEG 303
Score = 37.4 bits (85), Expect = 0.15
Identities = 20/56 (35%), Positives = 30/56 (52%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTE 431
EE+ + +EE+V E EEE ++E GEE++ K ED EE+ G+ E
Sbjct: 158 EEKEVKQQQEEQVEDEKLEEEEEDEEEEGEEEEEEEE-KGEDEEEEEGEEEEGEDE 212
Score = 37.0 bits (84), Expect = 0.20
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Frame = -2
Query: 595 EESESEDEEE-EVGGENCEEEGKEEHGVGEEKQSRNRGKTED-----LSEEKQRSNRGKT 434
EE E EDEEE E E EEEG+E+ G EE+ + ED EE++ G+
Sbjct: 240 EEEEGEDEEEGEEEEEEEEEEGEEKEGEDEEEGEEEEEEVEDEEEVGEEEEEEEEEEGEE 299
Query: 433 E 431
E
Sbjct: 300 E 300
Score = 36.6 bits (83), Expect = 0.26
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSN 446
EE E E+EEEE GE EEEG+++ EE++ + + E+ EE++ +
Sbjct: 283 EEVGEEEEEEEEEEGEE-EEEGEDKEVEEEEEEEKEEEEGEEEEEEEEEED 332
Score = 35.8 bits (81), Expect = 0.44
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -2
Query: 598 EEE--SESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQ 455
EEE E E+EEEE G E E E KE EE++ G+ E+ EE++
Sbjct: 282 EEEVGEEEEEEEEEEGEEEEEGEDKEVEEEEEEEKEEEEGEEEEEEEEEE 331
Score = 32.7 bits (73), Expect = 3.7
Identities = 18/49 (36%), Positives = 28/49 (56%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQR 452
EEE E ++ EEE E EEEG+EE EE+ + + ++ + K+R
Sbjct: 300 EEEGEDKEVEEEEEEEKEEEEGEEEEEEEEEEDNSWLLEETEIQDVKER 348
Score = 32.0 bits (71), Expect = 6.3
Identities = 19/48 (39%), Positives = 24/48 (49%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQ 455
EEE E E+E E+ E EEE KEE EE++ L EE +
Sbjct: 294 EEEGEEEEEGEDKEVEEEEEEEKEEEEGEEEEEEEEEEDNSWLLEETE 341
Score = 31.6 bits (70), Expect = 8.3
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRS 449
EEE E +EEEE GE+ E E +EE EEK+ + E+ EE+ S
Sbjct: 291 EEEEEEGEEEEE--GEDKEVEEEEE----EEKEEEEGEEEEEEEEEEDNS 334
>gb|AAO52605.1| hypothetical protein [Dictyostelium discoideum]
Length = 158
Score = 51.2 bits (121), Expect = 1e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEGRVP 419
EEE E E+EEE EEE EE GE+ +S+N+ K E+K+ R + EG +
Sbjct: 19 EEEEEHEEEEEHEDEHEEEEEEHEEEDGGEKTKSKNKDKDNTNDEKKKSKRRTRVEGDIQ 78
Query: 418 LPWELLQPVMR 386
LP ++ +MR
Sbjct: 79 LPVARIKRIMR 89
>gb|AAG00551.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 567
Score = 48.1 bits (113), Expect = 9e-05
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEE---EGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEG 428
EEE E E EEEE GE EE EG+E G GEE++ G+ E+ EE + G+ EG
Sbjct: 365 EEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEG 424
Score = 45.8 bits (107), Expect = 4e-04
Identities = 24/58 (41%), Positives = 35/58 (59%), Gaps = 1/58 (1%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTE-DLSEEKQRSNRGKTEG 428
E + E E+EEEE GE E EG+EE G GEE++ +G+ E + E ++ G+ EG
Sbjct: 236 EGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEG 293
Score = 44.3 bits (103), Expect = 0.001
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTE 431
EEE E E EEEE G E EG+E G GEE++ G+ + E + + R + E
Sbjct: 421 EEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREE 476
Score = 43.9 bits (102), Expect = 0.002
Identities = 25/60 (41%), Positives = 33/60 (54%), Gaps = 3/60 (5%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQ---RSNRGKTEG 428
EEE E E EEEE GE E EG+EE G G+ ++ G+ E+ EE + G+ EG
Sbjct: 243 EEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEG 302
Score = 42.7 bits (99), Expect = 0.004
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTE 431
EEE E + EEE GE EEEG+E G GEE++ G+ E E ++ G+ E
Sbjct: 266 EEEGEGKGEEEGEEGEG-EEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGE 320
Score = 41.2 bits (95), Expect = 0.010
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKT-EDLSEEKQRSNRGKTE 431
EEE E E EEEE G+ EEEG+E G GEE++ G+ E EE++ G+ E
Sbjct: 320 EEEGEGEGEEEEGEGKG-EEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEE 375
Score = 40.8 bits (94), Expect = 0.014
Identities = 23/58 (39%), Positives = 32/58 (54%), Gaps = 2/58 (3%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHG--VGEEKQSRNRGKTEDLSEEKQRSNRGKTE 431
E E E E+EE E GE+ E EG+EE G GEE++ G+ E E ++ G+ E
Sbjct: 342 EGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEE 399
Score = 40.8 bits (94), Expect = 0.014
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEG 428
+E+ E E ++ + EE G+EEHG GEE++ D EE+++ GK EG
Sbjct: 125 QEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEG-------DREEEEEKEGEGKEEG 174
Score = 40.4 bits (93), Expect = 0.018
Identities = 25/60 (41%), Positives = 30/60 (49%), Gaps = 4/60 (6%)
Frame = -2
Query: 595 EESESEDEEEEVGGENCEEEGK----EEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEG 428
EE E E EEEE GE E EGK E G GEE+ G+ E+ E + G+ EG
Sbjct: 251 EEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEG 310
Score = 40.0 bits (92), Expect = 0.023
Identities = 26/61 (42%), Positives = 33/61 (53%), Gaps = 4/61 (6%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEE---EGKEEHGVGEEKQSRNRGKTEDLSEEKQ-RSNRGKTE 431
EEE E E EEEE GE EE EG+EE G G+ ++ G+ E EE + G+ E
Sbjct: 303 EEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGE 362
Query: 430 G 428
G
Sbjct: 363 G 363
Score = 39.7 bits (91), Expect = 0.030
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = -2
Query: 598 EEESESEDEEEEVG-----GENCEEEGKEEHGVGEEKQSRNRGKTEDLSEE--KQRSNRG 440
EEE + E+EEE+ G GE E EG+ E GE K+ GK E EE +
Sbjct: 155 EEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEE 214
Query: 439 KTEGR 425
+TEGR
Sbjct: 215 ETEGR 219
Score = 39.3 bits (90), Expect = 0.040
Identities = 27/62 (43%), Positives = 33/62 (52%), Gaps = 5/62 (8%)
Frame = -2
Query: 598 EEESESEDEEEEVG-GENCEEEGK-EEHGVGEEKQSRNRGKTEDLSEEKQ---RSNRGKT 434
EEE E E EEE G GE E EG+ EE G GE ++ GK E+ EE + G+
Sbjct: 295 EEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEG 354
Query: 433 EG 428
EG
Sbjct: 355 EG 356
Score = 38.9 bits (89), Expect = 0.052
Identities = 23/59 (38%), Positives = 28/59 (46%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEGRV 422
EEE E E EE E GE E EG+ E GEE+ E+ E + G+ EG V
Sbjct: 382 EEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEV 440
Score = 38.9 bits (89), Expect = 0.052
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = -2
Query: 595 EESESEDEEEEVGGENCEE---EGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEG 428
EE E E EEEE GE EE EG+EE G GE ++ + E EE++ +G+ EG
Sbjct: 287 EEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEE-----EGEGEGEEEEGEGKGEEEG 340
Score = 38.9 bits (89), Expect = 0.052
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Frame = -2
Query: 598 EEESESEDEEEEVGGE---------NCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSN 446
EEE+E EE+E GGE E E +EE G GEE++ + E EE++
Sbjct: 213 EEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGE-EEEGEGEEEEGEG 271
Query: 445 RGKTEG 428
+G+ EG
Sbjct: 272 KGEEEG 277
Score = 38.1 bits (87), Expect = 0.088
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 17/74 (22%)
Frame = -2
Query: 598 EEESESEDEEEEVG--------------GENCEEEGKEEHGVGEEKQSRNRGKTED---L 470
EEE E E EEE G GE E EG+EE G GE + G+ E+
Sbjct: 312 EEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWE 371
Query: 469 SEEKQRSNRGKTEG 428
EE++ G+ EG
Sbjct: 372 GEEEEGEGEGEEEG 385
Score = 36.6 bits (83), Expect = 0.26
Identities = 25/57 (43%), Positives = 32/57 (55%), Gaps = 1/57 (1%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGK-EEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTE 431
EEE E E EEEE G E EEEG+ EE G GE ++ G+ E E ++ G+ E
Sbjct: 398 EEEGEGEGEEEE-GEEEGEEEGEGEEEGEGEGEE-EEEGEVEGEVEGEEGEGEGEEE 452
Score = 36.2 bits (82), Expect = 0.34
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEE----HGVGEEKQSRNRGKTEDLSEEKQRSNRGKTE 431
E E + E+E EE GE EEEG+ E G GEE++ G+ E+ E + G+ E
Sbjct: 331 EGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGE 390
Score = 35.0 bits (79), Expect = 0.75
Identities = 23/61 (37%), Positives = 30/61 (48%), Gaps = 6/61 (9%)
Frame = -2
Query: 595 EESESEDEEEEVGGENCEEEG------KEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKT 434
EE E E+E EE GE EEE +E G GEE++ G+ E E ++ GK
Sbjct: 278 EEGEGEEEGEEGEGEG-EEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKG 336
Query: 433 E 431
E
Sbjct: 337 E 337
Score = 34.3 bits (77), Expect = 1.3
Identities = 25/63 (39%), Positives = 31/63 (48%), Gaps = 7/63 (11%)
Frame = -2
Query: 595 EESESEDEEEEVG-GENCEEEG------KEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGK 437
EE E E E EE G GE EEEG + E G GE ++ G+ ED E + G+
Sbjct: 311 EEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGED-GEGEGEEEEGE 369
Query: 436 TEG 428
EG
Sbjct: 370 WEG 372
Score = 33.9 bits (76), Expect = 1.7
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = -2
Query: 595 EESESEDEEEEVGGEN----CEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEG 428
EE E E EEEE GE EEEG+EE G GEE+ G+ E EE++ G+ EG
Sbjct: 390 EEGEGEGEEEEGEGEGEEEEGEEEGEEE-GEGEEE---GEGEGE---EEEEGEVEGEVEG 442
Score = 33.9 bits (76), Expect = 1.7
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGK-EEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEGRV 422
E E E E+ EEE GE E+EG+ EE+ E++ GK ++ EE+ G+ +V
Sbjct: 446 EGEGEEEEGEEE--GEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEEYKKV 503
Score = 33.9 bits (76), Expect = 1.7
Identities = 20/58 (34%), Positives = 28/58 (47%), Gaps = 2/58 (3%)
Frame = -2
Query: 598 EEESESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLS--EEKQRSNRGKTE 431
E E E+ EE GE EEEG E +E + + G+ E++ EK+ R K E
Sbjct: 137 ERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEE 194
Score = 33.5 bits (75), Expect = 2.2
Identities = 18/53 (33%), Positives = 27/53 (49%)
Frame = -2
Query: 586 ESEDEEEEVGGENCEEEGKEEHGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEG 428
+ ++E E GGE EG+EE G EE++ + E+ E+ R K EG
Sbjct: 136 KERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEG 188
Score = 32.3 bits (72), Expect = 4.8
Identities = 23/58 (39%), Positives = 34/58 (57%), Gaps = 2/58 (3%)
Frame = -2
Query: 595 EESESEDEEEEVGGENCEEEGKEE--HGVGEEKQSRNRGKTEDLSEEKQRSNRGKTEG 428
E+ E E ++EE G+ EE+G+EE G GEE+++ RG EEK+ G+ EG
Sbjct: 184 EKEEGERKKEERAGK--EEKGEEEGDQGEGEEEETEGRG------EEKEEG--GEVEG 231
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 537,274,350
Number of Sequences: 1393205
Number of extensions: 12861374
Number of successful extensions: 131576
Number of sequences better than 10.0: 1299
Number of HSP's better than 10.0 without gapping: 57716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97007
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
