Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009732A_C01 KMC009732A_c01
(605 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF20003.1|AF213937_1 1-acyl-sn-glycerol-3-phosphate acyltran... 113 2e-24
pir||T07936 probable glycerol-3-phosphate O-acyltransferase (EC ... 103 2e-21
emb|CAB09138.1| acyl-CoA:1-acylglycerol-3-phosphate acyltransfer... 100 1e-20
pir||T06755 probable glycerol-3-phosphate O-acyltransferase (EC ... 99 6e-20
gb|AAM61033.1| 1-acylcerol-3-phosphate acyltransferase-like prot... 99 6e-20
>gb|AAF20003.1|AF213937_1 1-acyl-sn-glycerol-3-phosphate acyltransferase [Prunus dulcis]
Length = 306
Score = 113 bits (282), Expect = 2e-24
Identities = 59/90 (65%), Positives = 68/90 (75%)
Frame = -3
Query: 603 TGRPMKSLVVALSWAGLVIAGSVKFLQWSSLLSSWKGVAFSTLCLAVVTGLMHVLILFSQ 424
TGRP+KSL+V +WA L+I G++KFL WSSLLSSWKG+AFS L L VVT LM +LI FSQ
Sbjct: 219 TGRPLKSLLVVTAWACLLILGALKFLYWSSLLSSWKGIAFSALGLGVVTVLMQILIRFSQ 278
Query: 423 SERSTPAKVAPAKPKNNGEQQLDGTNDKQQ 334
SERSTPA VAP KN GE G +KQQ
Sbjct: 279 SERSTPAPVAPTNNKNKGES--SGKPEKQQ 306
>pir||T07936 probable glycerol-3-phosphate O-acyltransferase (EC 2.3.1.15) -
rape gi|1149595|emb|CAA90019.1|
1-acyl-sn-glycerol-3-phosphate acyltransferase [Brassica
napus]
Length = 311
Score = 103 bits (257), Expect = 2e-21
Identities = 50/76 (65%), Positives = 60/76 (78%)
Frame = -3
Query: 600 GRPMKSLVVALSWAGLVIAGSVKFLQWSSLLSSWKGVAFSTLCLAVVTGLMHVLILFSQS 421
GRP+KSL V LSWA L+ G++KFL WS+L SSWKG+A S L L ++T M +LI SQS
Sbjct: 220 GRPIKSLAVVLSWACLLTLGAMKFLHWSNLFSSWKGIALSALGLGIITLCMQILIRSSQS 279
Query: 420 ERSTPAKVAPAKPKNN 373
ERSTPAKVAPAKPK+N
Sbjct: 280 ERSTPAKVAPAKPKDN 295
>emb|CAB09138.1| acyl-CoA:1-acylglycerol-3-phosphate acyltransferase [Brassica
napus]
Length = 390
Score = 100 bits (250), Expect = 1e-20
Identities = 48/76 (63%), Positives = 59/76 (77%)
Frame = -3
Query: 600 GRPMKSLVVALSWAGLVIAGSVKFLQWSSLLSSWKGVAFSTLCLAVVTGLMHVLILFSQS 421
GRP+KSL V +SWA L+ G++KFL WS+L SSWKG+A S L ++T M +LI SQS
Sbjct: 299 GRPIKSLAVVVSWACLLTLGAMKFLHWSNLFSSWKGIALSAFGLGIITLCMQILIRSSQS 358
Query: 420 ERSTPAKVAPAKPKNN 373
ERSTPAKVAPAKPK+N
Sbjct: 359 ERSTPAKVAPAKPKDN 374
>pir||T06755 probable glycerol-3-phosphate O-acyltransferase (EC 2.3.1.15) -
Arabidopsis thaliana gi|4678282|emb|CAB41190.1|
1-acylcerol-3-phosphate acyltransferase-like protein
[Arabidopsis thaliana]
Length = 310
Score = 98.6 bits (244), Expect = 6e-20
Identities = 46/76 (60%), Positives = 57/76 (74%)
Frame = -3
Query: 600 GRPMKSLVVALSWAGLVIAGSVKFLQWSSLLSSWKGVAFSTLCLAVVTGLMHVLILFSQS 421
GRP+KSL V LSWA ++ G++KFL W+ L SSWKG+ S L L ++T M +LI SQS
Sbjct: 220 GRPIKSLAVVLSWACVLTLGAIKFLHWAQLFSSWKGITISALGLGIITLCMQILIRSSQS 279
Query: 420 ERSTPAKVAPAKPKNN 373
ERSTPAKV PAKPK+N
Sbjct: 280 ERSTPAKVVPAKPKDN 295
>gb|AAM61033.1| 1-acylcerol-3-phosphate acyltransferase-like protein [Arabidopsis
thaliana]
Length = 389
Score = 98.6 bits (244), Expect = 6e-20
Identities = 46/76 (60%), Positives = 57/76 (74%)
Frame = -3
Query: 600 GRPMKSLVVALSWAGLVIAGSVKFLQWSSLLSSWKGVAFSTLCLAVVTGLMHVLILFSQS 421
GRP+KSL V LSWA ++ G++KFL W+ L SSWKG+ S L L ++T M +LI SQS
Sbjct: 299 GRPIKSLAVVLSWACVLTLGAIKFLHWAQLFSSWKGITISALGLGIITLCMQILIRSSQS 358
Query: 420 ERSTPAKVAPAKPKNN 373
ERSTPAKV PAKPK+N
Sbjct: 359 ERSTPAKVVPAKPKDN 374
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 535,137,811
Number of Sequences: 1393205
Number of extensions: 11777235
Number of successful extensions: 36739
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 35527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36722
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
