Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009691A_C01 KMC009691A_c01
(463 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC05666.1| OJ1126_G08.9 [Oryza sativa (japonica cultivar-gr... 101 3e-21
ref|NP_188241.2| unknown protein; protein id: At3g16200.1, suppo... 95 3e-19
dbj|BAB01260.1| gene_id:MYA6.1~unknown protein [Arabidopsis thal... 95 3e-19
ref|NP_649395.1| CG11425-PA [Drosophila melanogaster] gi|7296548... 31 7.1
ref|NP_219612.1| CHLPS hypothetical protein [Chlamydia trachomat... 31 7.1
>dbj|BAC05666.1| OJ1126_G08.9 [Oryza sativa (japonica cultivar-group)]
Length = 445
Score = 101 bits (252), Expect = 3e-21
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -3
Query: 461 LPPVAGPSLTHQTRYDPARTPNPIVEDGRYGLFRRLGLADLDNSVFNGYTQMVYLQIS 288
LPPVAGPSLTHQTRYDPAR +PI+EDGR+G+F+R+GLA LD SVFNGYTQM Y+QIS
Sbjct: 379 LPPVAGPSLTHQTRYDPARASDPIIEDGRFGMFQRIGLARLDASVFNGYTQMSYVQIS 436
>ref|NP_188241.2| unknown protein; protein id: At3g16200.1, supported by cDNA:
gi_20466459 [Arabidopsis thaliana]
gi|20466460|gb|AAM20547.1| unknown protein [Arabidopsis
thaliana] gi|22136420|gb|AAM91288.1| unknown protein
[Arabidopsis thaliana]
Length = 434
Score = 95.1 bits (235), Expect = 3e-19
Identities = 44/59 (74%), Positives = 51/59 (85%)
Frame = -3
Query: 461 LPPVAGPSLTHQTRYDPARTPNPIVEDGRYGLFRRLGLADLDNSVFNGYTQMVYLQISE 285
LPPVAGPSLTHQ+RYDPAR PIV DG++ LF+R+GL LD SVFNGYTQMVYL+IS+
Sbjct: 373 LPPVAGPSLTHQSRYDPARATPPIVADGKHRLFQRIGLGRLDKSVFNGYTQMVYLEISK 431
>dbj|BAB01260.1| gene_id:MYA6.1~unknown protein [Arabidopsis thaliana]
Length = 456
Score = 95.1 bits (235), Expect = 3e-19
Identities = 44/59 (74%), Positives = 51/59 (85%)
Frame = -3
Query: 461 LPPVAGPSLTHQTRYDPARTPNPIVEDGRYGLFRRLGLADLDNSVFNGYTQMVYLQISE 285
LPPVAGPSLTHQ+RYDPAR PIV DG++ LF+R+GL LD SVFNGYTQMVYL+IS+
Sbjct: 395 LPPVAGPSLTHQSRYDPARATPPIVADGKHRLFQRIGLGRLDKSVFNGYTQMVYLEISK 453
>ref|NP_649395.1| CG11425-PA [Drosophila melanogaster] gi|7296548|gb|AAF51832.1|
CG11425-PA [Drosophila melanogaster]
Length = 305
Score = 30.8 bits (68), Expect = 7.1
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -1
Query: 349 WLTLTILYLMDTLRWFIYRYLNNDL 275
W TL +Y +T+RWF+Y Y++NDL
Sbjct: 91 WPTLWPVY--NTVRWFLYGYVSNDL 113
>ref|NP_219612.1| CHLPS hypothetical protein [Chlamydia trachomatis]
gi|7468632|pir||D71557 hypothetical protein CT109 -
Chlamydia trachomatis (serotype D, strain UW3/Cx)
gi|3328506|gb|AAC67700.1| CHLPS hypothetical protein
[Chlamydia trachomatis]
Length = 262
Score = 30.8 bits (68), Expect = 7.1
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 243 STTAYPCQSNSK---SLFRYL*INHLSVSIKYRIVKVSQTKPSEQTIPPIFNNRVWCASG 413
S T +PC+ +SK S F INH + K+ SQ + S TI P+F R C +
Sbjct: 102 SLTVFPCEGSSKTNWSFFWDSFINHSNELTKFH---SSQFESSVDTI-PVFIKRCLCTNT 157
Query: 414 IISGL 428
+SG+
Sbjct: 158 RVSGI 162
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 392,335,033
Number of Sequences: 1393205
Number of extensions: 7873786
Number of successful extensions: 17739
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17738
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11998661767
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
