>KMC009675A_C01 KMC009675A_c01
tttttttttttttttAAATAGGAAGTCTCAGCAGGCATTTATATGTATACACAATCAAGA
TGAGAACTATTTACAATATGAAAGTCAACCAATCTGTACACTTCCCAATAGGATTGACTC
AGATGTTCGAAGGCAGGACATTGAAGGGAACTACAACCATAATTAGCAAAAAAGTACAGC
ACCGTGCTGCATTTGTGAACAGAAAATACCTAACGCAAAATGTTAATTTCTATCTTAATC
TTCTCTTAATCCATCTGGTAAGCCCACCCATGAGTGTCCAAGAATGCCTGGACCGCTTCT
TTAATGGCCAAGTTCGGTACTAGCTGTGATGGATCAAGTGGTTCCCTCGTGACCGGGTCA
AATCTACCAACCTTCTGAAGATGGTCAAGAATCACTGCCCTCTCATATGTAAGTCCACTT
GGAGTGATTACAGGATCATGAAAAATGTCAAGGGTGATTTTACAGCATAAGTAATCTGGG
ACCTATATAGACTCCACAAGCCAATCCCAGTGATTAATATTTCTAGAGCACTGCAAAAAA
TCTCAAGAAGAAAAAATGTACACACC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC009675A_C01 KMC009675A_c01
         (566 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_566305.1| expressed protein; protein id: At3g07370.1, sup...   129  3e-29
dbj|BAB22329.1| unnamed protein product [Mus musculus]                100  2e-20
ref|NP_062693.1| STIP1 homology and U-Box containing protein 1; ...   100  2e-20
ref|XP_213270.1| similar to STIP1 homology and U-Box containing ...   100  2e-20
gb|AAG17211.1|AF217968_1 unknown [Homo sapiens]                       100  2e-20

>ref|NP_566305.1| expressed protein; protein id: At3g07370.1, supported by cDNA:
           gi_14596038, supported by cDNA: gi_17978728 [Arabidopsis
           thaliana] gi|6041853|gb|AAF02162.1|AC009853_22
           hypothetical protein [Arabidopsis thaliana]
           gi|14596039|gb|AAK68747.1| Unknown protein [Arabidopsis
           thaliana] gi|17978729|gb|AAL47358.1| unknown protein
           [Arabidopsis thaliana]
          Length = 278

 Score =  129 bits (324), Expect = 3e-29
 Identities = 57/77 (74%), Positives = 69/77 (89%)
 Frame = -1

Query: 482 VPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTREPLDPSQLVPNLAI 303
           VPDYLCC ITL+IF DPVI+PSG+TYERA IL+HL+KVG+FDP+TRE +DP+ LVPNLAI
Sbjct: 200 VPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLAI 259

Query: 302 KEAVQAFLDTHGWAYQM 252
           KEAV A+L+ H WAY+M
Sbjct: 260 KEAVAAYLEKHVWAYKM 276

>dbj|BAB22329.1| unnamed protein product [Mus musculus]
          Length = 304

 Score =  100 bits (248), Expect = 2e-20
 Identities = 42/73 (57%), Positives = 56/73 (76%)
 Frame = -1

Query: 482 VPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTREPLDPSQLVPNLAI 303
           +PDYLC KI+ ++  +P ITPSG+TY+R  I +HLQ+VG FDPVTR PL   QL+PNLA+
Sbjct: 228 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 287

Query: 302 KEAVQAFLDTHGW 264
           KE + AF+  +GW
Sbjct: 288 KEVIDAFISENGW 300

>ref|NP_062693.1| STIP1 homology and U-Box containing protein 1; carboxy terminus of
           Hsp70-interacting protein [Mus musculus]
           gi|4928066|gb|AAD33401.1|AF129086_1 carboxy terminus of
           Hsp70-interacting protein [Mus musculus]
           gi|12835659|dbj|BAB23315.1| unnamed protein product [Mus
           musculus] gi|22268103|gb|AAH27427.1| STIP1 homology and
           U-Box containing protein 1 [Mus musculus]
           gi|24660355|gb|AAH38939.1| Similar to STIP1 homology and
           U-Box containing protein 1 [Mus musculus]
           gi|26337607|dbj|BAC32489.1| unnamed protein product [Mus
           musculus]
          Length = 304

 Score =  100 bits (248), Expect = 2e-20
 Identities = 42/73 (57%), Positives = 56/73 (76%)
 Frame = -1

Query: 482 VPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTREPLDPSQLVPNLAI 303
           +PDYLC KI+ ++  +P ITPSG+TY+R  I +HLQ+VG FDPVTR PL   QL+PNLA+
Sbjct: 228 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 287

Query: 302 KEAVQAFLDTHGW 264
           KE + AF+  +GW
Sbjct: 288 KEVIDAFISENGW 300

>ref|XP_213270.1| similar to STIP1 homology and U-Box containing protein 1; carboxy
           terminus of Hsp70-interacting protein [Mus musculus]
           [Rattus norvegicus]
          Length = 304

 Score =  100 bits (248), Expect = 2e-20
 Identities = 42/73 (57%), Positives = 56/73 (76%)
 Frame = -1

Query: 482 VPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTREPLDPSQLVPNLAI 303
           +PDYLC KI+ ++  +P ITPSG+TY+R  I +HLQ+VG FDPVTR PL   QL+PNLA+
Sbjct: 228 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 287

Query: 302 KEAVQAFLDTHGW 264
           KE + AF+  +GW
Sbjct: 288 KEVIDAFISENGW 300

>gb|AAG17211.1|AF217968_1 unknown [Homo sapiens]
          Length = 231

 Score =  100 bits (248), Expect = 2e-20
 Identities = 42/73 (57%), Positives = 56/73 (76%)
 Frame = -1

Query: 482 VPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTREPLDPSQLVPNLAI 303
           +PDYLC KI+ ++  +P ITPSG+TY+R  I +HLQ+VG FDPVTR PL   QL+PNLA+
Sbjct: 155 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 214

Query: 302 KEAVQAFLDTHGW 264
           KE + AF+  +GW
Sbjct: 215 KEVIDAFISENGW 227

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 479,087,563
Number of Sequences: 1393205
Number of extensions: 10495115
Number of successful extensions: 23143
Number of sequences better than 10.0: 203
Number of HSP's better than 10.0 without gapping: 22517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23097
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MF075b02_f BP032260 1 566 2 MR015b03_f BP077083 15 346

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