Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009620A_C01 KMC009620A_c01
(520 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO26314.1| protein disulphide isomerase [Elaeis guineensis] 145 4e-34
ref|NP_568926.1| protein disulfide isomerase precursor - like; p... 133 1e-30
gb|AAM65262.1| protein disulfide isomerase precursor-like [Arabi... 133 1e-30
ref|NP_191056.2| protein disulfide-isomerase-like protein; prote... 125 3e-28
pir||T06724 protein disulfide-isomerase homolog F28P10.60 - Arab... 125 3e-28
>gb|AAO26314.1| protein disulphide isomerase [Elaeis guineensis]
Length = 447
Score = 145 bits (365), Expect = 4e-34
Identities = 73/100 (73%), Positives = 88/100 (88%)
Frame = -1
Query: 520 GIESLVIAKMDGTTNEHHRPKSDGYPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHA 341
GIESLVIAKMDGT+NEH R K DG+PTLLFFPAGNKSFDP+TVDTDRTVVAFYKF+KKHA
Sbjct: 350 GIESLVIAKMDGTSNEHPRAKVDGFPTLLFFPAGNKSFDPVTVDTDRTVVAFYKFIKKHA 409
Query: 340 SIPFKLQKPASTSESENSAAKGSSDAKESQSSNSDVKDEL 221
+IPFKLQ+PAS ++++ SA GS+ E +S+++ VKDEL
Sbjct: 410 AIPFKLQRPASAAKTD-SATDGSAPVGE-KSASTGVKDEL 447
>ref|NP_568926.1| protein disulfide isomerase precursor - like; protein id:
At5g60640.1, supported by cDNA: 3797. [Arabidopsis
thaliana] gi|9759328|dbj|BAB09837.1| protein disulphide
isomerase-like protein [Arabidopsis thaliana]
gi|25082813|gb|AAN72005.1| protein disulfide isomerase
precursor - like [Arabidopsis thaliana]
Length = 597
Score = 133 bits (335), Expect = 1e-30
Identities = 68/107 (63%), Positives = 86/107 (79%), Gaps = 8/107 (7%)
Frame = -1
Query: 517 IESLVIAKMDGTTNEHHRPKSDGYPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHAS 338
I+SLVI KMDGTTNEH + K++G+PT+LFFPAGNK+ +PITVDTDRTVVAFYKFL+KHA+
Sbjct: 491 IDSLVITKMDGTTNEHPKAKAEGFPTILFFPAGNKTSEPITVDTDRTVVAFYKFLRKHAT 550
Query: 337 IPFKLQKPASTSE---SENSAAKGSSDAKES-----QSSNSDVKDEL 221
IPFKL+KPAST +E++ +++ KES +SS SD KDEL
Sbjct: 551 IPFKLEKPASTESPKTAESTPKVETTETKESPDSTTKSSQSDSKDEL 597
>gb|AAM65262.1| protein disulfide isomerase precursor-like [Arabidopsis thaliana]
Length = 597
Score = 133 bits (335), Expect = 1e-30
Identities = 68/107 (63%), Positives = 86/107 (79%), Gaps = 8/107 (7%)
Frame = -1
Query: 517 IESLVIAKMDGTTNEHHRPKSDGYPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHAS 338
I+SLVI KMDGTTNEH + K++G+PT+LFFPAGNK+ +PITVDTDRTVVAFYKFL+KHA+
Sbjct: 491 IDSLVITKMDGTTNEHPKAKAEGFPTILFFPAGNKTSEPITVDTDRTVVAFYKFLRKHAT 550
Query: 337 IPFKLQKPASTSE---SENSAAKGSSDAKES-----QSSNSDVKDEL 221
IPFKL+KPAST +E++ +++ KES +SS SD KDEL
Sbjct: 551 IPFKLEKPASTESPKTAESTPKVETTETKESPDSTTKSSQSDSKDEL 597
>ref|NP_191056.2| protein disulfide-isomerase-like protein; protein id: At3g54960.1,
supported by cDNA: gi_20260431 [Arabidopsis thaliana]
gi|18072841|emb|CAC81067.1| ERp72 [Arabidopsis thaliana]
gi|20260432|gb|AAM13114.1| protein
disulfide-isomerase-like protein [Arabidopsis thaliana]
gi|23197928|gb|AAN15491.1| protein
disulfide-isomerase-like protein [Arabidopsis thaliana]
Length = 579
Score = 125 bits (314), Expect = 3e-28
Identities = 68/100 (68%), Positives = 76/100 (76%)
Frame = -1
Query: 520 GIESLVIAKMDGTTNEHHRPKSDGYPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHA 341
GI+SLV+AKMDGT+NEH R K+DG+PT+LFFP GNKSFDPI VD DRTVV YKFLKKHA
Sbjct: 486 GIDSLVVAKMDGTSNEHPRAKADGFPTILFFPGGNKSFDPIAVDVDRTVVELYKFLKKHA 545
Query: 340 SIPFKLQKPASTSESENSAAKGSSDAKESQSSNSDVKDEL 221
SIPFKL+KPA T E S K S + E SS KDEL
Sbjct: 546 SIPFKLEKPA-TPEPVISTMK-SDEKIEGDSS----KDEL 579
>pir||T06724 protein disulfide-isomerase homolog F28P10.60 - Arabidopsis
thaliana gi|4678297|emb|CAB41088.1| protein
disulfide-isomerase-like protein [Arabidopsis thaliana]
Length = 566
Score = 125 bits (314), Expect = 3e-28
Identities = 68/100 (68%), Positives = 76/100 (76%)
Frame = -1
Query: 520 GIESLVIAKMDGTTNEHHRPKSDGYPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHA 341
GI+SLV+AKMDGT+NEH R K+DG+PT+LFFP GNKSFDPI VD DRTVV YKFLKKHA
Sbjct: 473 GIDSLVVAKMDGTSNEHPRAKADGFPTILFFPGGNKSFDPIAVDVDRTVVELYKFLKKHA 532
Query: 340 SIPFKLQKPASTSESENSAAKGSSDAKESQSSNSDVKDEL 221
SIPFKL+KPA T E S K S + E SS KDEL
Sbjct: 533 SIPFKLEKPA-TPEPVISTMK-SDEKIEGDSS----KDEL 566
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 444,467,105
Number of Sequences: 1393205
Number of extensions: 9452056
Number of successful extensions: 24692
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 23518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24655
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
