Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009373A_C01 KMC009373A_c01
(490 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB51524.1| acyl-ACP thioesterase [Garcinia mangostana] 51 6e-06
pir||A59034 oleoyl-[acyl-carrier-protein] hydrolase (EC 3.1.2.14... 49 3e-05
emb|CAA85388.1| acyl-(acyl carrier protein) thioesterase [Arabid... 49 3e-05
ref|NP_172327.1| acyl-(acyl carrier protein) thioesterase, putat... 49 3e-05
gb|AAL77445.1|L78468_1 acyl-ACP thioesterase [Perilla frutescens] 49 3e-05
>gb|AAB51524.1| acyl-ACP thioesterase [Garcinia mangostana]
Length = 355
Score = 51.2 bits (121), Expect = 6e-06
Identities = 27/74 (36%), Positives = 43/74 (57%), Gaps = 5/74 (6%)
Frame = -2
Query: 483 YNMTSMTLEFRRECTQTNLLESMTCPTERVMNESNNYSIR-RPD----LQYTHLLRLQHD 319
+ + ++TL++RREC +L++S+T P +E+ N S P+ L + HLLRL D
Sbjct: 279 HELQTITLDYRRECQHDDLVDSLTSPEPSEFSETTNGSANVSPNDNRCLNFLHLLRLSSD 338
Query: 318 KSDVVRARTEWHLK 277
S++ R RT W K
Sbjct: 339 GSEINRGRTVWRKK 352
>pir||A59034 oleoyl-[acyl-carrier-protein] hydrolase (EC 3.1.2.14) precursor
(clone TE 1-1) - Arabidopsis thaliana
gi|634003|emb|CAA85387.1| acyl-(acyl carrier protein)
thioesterase [Arabidopsis thaliana]
Length = 412
Score = 48.9 bits (115), Expect = 3e-05
Identities = 29/67 (43%), Positives = 41/67 (60%)
Frame = -2
Query: 477 MTSMTLEFRRECTQTNLLESMTCPTERVMNESNNYSIRRPDLQYTHLLRLQHDKSDVVRA 298
+ SMTLE+RREC + ++L+S+T T + D++ HLLRLQ D ++VVR
Sbjct: 341 LKSMTLEYRRECGRDSVLQSLTAVTGCDIGNLATAG----DVECQHLLRLQ-DGAEVVRG 395
Query: 297 RTEWHLK 277
RTEW K
Sbjct: 396 RTEWSSK 402
>emb|CAA85388.1| acyl-(acyl carrier protein) thioesterase [Arabidopsis thaliana]
Length = 412
Score = 48.9 bits (115), Expect = 3e-05
Identities = 29/67 (43%), Positives = 41/67 (60%)
Frame = -2
Query: 477 MTSMTLEFRRECTQTNLLESMTCPTERVMNESNNYSIRRPDLQYTHLLRLQHDKSDVVRA 298
+ SMTLE+RREC + ++L+S+T T + D++ HLLRLQ D ++VVR
Sbjct: 341 LKSMTLEYRRECGRDSVLQSLTAVTGCDIGNLATAG----DVECQHLLRLQ-DGAEVVRG 395
Query: 297 RTEWHLK 277
RTEW K
Sbjct: 396 RTEWSSK 402
>ref|NP_172327.1| acyl-(acyl carrier protein) thioesterase, putative; protein id:
At1g08510.1, supported by cDNA: gi_15451197, supported
by cDNA: gi_16648914, supported by cDNA: gi_17978738
[Arabidopsis thaliana]
gi|6664317|gb|AAF22899.1|AC006932_16 T27G7.19
[Arabidopsis thaliana] gi|15451198|gb|AAK96870.1|
putative oleoyl-[acyl-carrier-protein [Arabidopsis
thaliana] gi|16648915|gb|AAL24309.1| putative
oleoyl-[acyl-carrier-protein [Arabidopsis thaliana]
gi|17978739|gb|AAL47363.1| putative
oleoyl-[acyl-carrier-protein [Arabidopsis thaliana]
Length = 412
Score = 48.9 bits (115), Expect = 3e-05
Identities = 29/67 (43%), Positives = 41/67 (60%)
Frame = -2
Query: 477 MTSMTLEFRRECTQTNLLESMTCPTERVMNESNNYSIRRPDLQYTHLLRLQHDKSDVVRA 298
+ SMTLE+RREC + ++L+S+T T + D++ HLLRLQ D ++VVR
Sbjct: 341 LKSMTLEYRRECGRDSVLQSLTAVTGCDIGNLATAG----DVECQHLLRLQ-DGAEVVRG 395
Query: 297 RTEWHLK 277
RTEW K
Sbjct: 396 RTEWSSK 402
>gb|AAL77445.1|L78468_1 acyl-ACP thioesterase [Perilla frutescens]
Length = 368
Score = 48.9 bits (115), Expect = 3e-05
Identities = 26/79 (32%), Positives = 43/79 (53%), Gaps = 10/79 (12%)
Frame = -2
Query: 483 YNMTSMTLEFRRECTQTNLLESMTCPTERV------MNESNNYSIRRPD----LQYTHLL 334
+ + ++TL++RREC ++++S+T P V + +N D LQ+ HLL
Sbjct: 286 HELQTITLDYRRECQHDDVVDSLTSPESAVNSAVSGLQGTNGSPTAAKDENDYLQFLHLL 345
Query: 333 RLQHDKSDVVRARTEWHLK 277
R+ D S++ R RTEW K
Sbjct: 346 RISTDGSEINRGRTEWRKK 364
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 385,860,724
Number of Sequences: 1393205
Number of extensions: 7723304
Number of successful extensions: 21483
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 20589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21416
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 14271597018
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
