Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009371A_C01 KMC009371A_c01
(608 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P36181|HS80_LYCES HEAT SHOCK COGNATE PROTEIN 80 gi|7441893|pi... 363 1e-99
gb|AAN31859.1| putative heat shock protein 81-2 (HSP81-2) [Arabi... 361 4e-99
ref|NP_200414.1| HEAT SHOCK PROTEIN 81-2 (HSP81-2) (sp|P55737); ... 361 4e-99
gb|AAL49788.1| putative heat shock protein 90 [Arabidopsis thali... 360 1e-98
gb|AAB33937.1| heat-shock Protein [Arabidopsis thaliana] 360 1e-98
>sp|P36181|HS80_LYCES HEAT SHOCK COGNATE PROTEIN 80 gi|7441893|pir||T07037 heat shock
protein 80 - tomato gi|170456|gb|AAB01376.1| heat shock
cognate protein 80 gi|445601|prf||1909348A heat shock
protein hsp80
Length = 699
Score = 363 bits (931), Expect = 1e-99
Identities = 186/196 (94%), Positives = 192/196 (97%), Gaps = 1/196 (0%)
Frame = -2
Query: 586 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQ 407
M+D ETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLDGQ
Sbjct: 1 MSDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60
Query: 406 PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 227
PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ
Sbjct: 61 PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120
Query: 226 FGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRD-SGEPLGRGTKITLHLKE 50
FGVGFYSAYLVAEKV+VTTKHNDDEQY+WESQAGGSFTVTRD SGE LGRGTK+ L+LKE
Sbjct: 121 FGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKE 180
Query: 49 DQLEYLEERRLKDLIK 2
DQLEYLEERRLKDLIK
Sbjct: 181 DQLEYLEERRLKDLIK 196
>gb|AAN31859.1| putative heat shock protein 81-2 (HSP81-2) [Arabidopsis thaliana]
Length = 699
Score = 361 bits (927), Expect = 4e-99
Identities = 184/196 (93%), Positives = 191/196 (96%), Gaps = 1/196 (0%)
Frame = -2
Query: 586 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQ 407
MAD ETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLDGQ
Sbjct: 1 MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60
Query: 406 PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 227
PELFIHIIPDK NNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120
Query: 226 FGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRD-SGEPLGRGTKITLHLKE 50
FGVGFYSAYLVA+KV+VTTKHNDDEQY+WESQAGGSFTVTRD SGE LGRGTK+ L+LKE
Sbjct: 121 FGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGETLGRGTKMVLYLKE 180
Query: 49 DQLEYLEERRLKDLIK 2
DQLEYLEERRLKDL+K
Sbjct: 181 DQLEYLEERRLKDLVK 196
>ref|NP_200414.1| HEAT SHOCK PROTEIN 81-2 (HSP81-2) (sp|P55737); protein id:
At5g56030.1, supported by cDNA: gi_17065347 [Arabidopsis
thaliana] gi|2495365|sp|P55737|HS82_ARATH Heat shock
protein 81-2 (HSP81-2) gi|9758623|dbj|BAB09285.1| HEAT
SHOCK PROTEIN 81-2 (HSP81-2) [Arabidopsis thaliana]
gi|17065348|gb|AAL32828.1| HEAT SHOCK PROTEIN 81-2
(HSP81-2) [Arabidopsis thaliana]
gi|22136254|gb|AAM91205.1| heat shock protein 81-2
[Arabidopsis thaliana] gi|25054933|gb|AAN71943.1|
putative heat-shock protein HSP81-2 [Arabidopsis
thaliana] gi|27311859|gb|AAO00895.1| Unknown protein
[Arabidopsis thaliana] gi|445127|prf||1908431B heat
shock protein HSP81-2
Length = 699
Score = 361 bits (927), Expect = 4e-99
Identities = 184/196 (93%), Positives = 191/196 (96%), Gaps = 1/196 (0%)
Frame = -2
Query: 586 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQ 407
MAD ETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLDGQ
Sbjct: 1 MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60
Query: 406 PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 227
PELFIHIIPDK NNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120
Query: 226 FGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRD-SGEPLGRGTKITLHLKE 50
FGVGFYSAYLVA+KV+VTTKHNDDEQY+WESQAGGSFTVTRD SGE LGRGTK+ L+LKE
Sbjct: 121 FGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGETLGRGTKMVLYLKE 180
Query: 49 DQLEYLEERRLKDLIK 2
DQLEYLEERRLKDL+K
Sbjct: 181 DQLEYLEERRLKDLVK 196
>gb|AAL49788.1| putative heat shock protein 90 [Arabidopsis thaliana]
Length = 699
Score = 360 bits (923), Expect = 1e-98
Identities = 182/196 (92%), Positives = 191/196 (96%), Gaps = 1/196 (0%)
Frame = -2
Query: 586 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQ 407
MAD ETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLDGQ
Sbjct: 1 MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60
Query: 406 PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 227
PELFIHIIPDK NNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120
Query: 226 FGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRD-SGEPLGRGTKITLHLKE 50
FGVGFYSAYLVA+KV+VTTKHNDDEQY+WESQAGGSFTVTRD SGE LGRGTK+ L+LKE
Sbjct: 121 FGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMVLYLKE 180
Query: 49 DQLEYLEERRLKDLIK 2
DQ+EY+EERRLKDL+K
Sbjct: 181 DQMEYIEERRLKDLVK 196
>gb|AAB33937.1| heat-shock Protein [Arabidopsis thaliana]
Length = 699
Score = 360 bits (923), Expect = 1e-98
Identities = 182/196 (92%), Positives = 191/196 (96%), Gaps = 1/196 (0%)
Frame = -2
Query: 586 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQ 407
MAD ETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLDGQ
Sbjct: 1 MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60
Query: 406 PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 227
PELFIHIIPDK NNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120
Query: 226 FGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRD-SGEPLGRGTKITLHLKE 50
FGVGFYSAYLVA+KV+VTTKHNDDEQY+WESQAGGSFTVTRD SGE LGRGTK+ L+LKE
Sbjct: 121 FGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMVLYLKE 180
Query: 49 DQLEYLEERRLKDLIK 2
DQ+EY+EERRLKDL+K
Sbjct: 181 DQMEYIEERRLKDLVK 196
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 549,643,185
Number of Sequences: 1393205
Number of extensions: 12744541
Number of successful extensions: 47769
Number of sequences better than 10.0: 507
Number of HSP's better than 10.0 without gapping: 43912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47061
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
