Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009355A_C01 KMC009355A_c01
(568 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176568.1| unknown protein; protein id: At1g63830.1, suppo... 282 2e-75
ref|NP_198955.1| putative protein; protein id: At5g41390.1 [Arab... 279 2e-74
ref|NP_194078.2| expressed protein; protein id: At4g23470.1, sup... 271 3e-72
gb|AAM63607.1| unknown [Arabidopsis thaliana] 266 1e-70
gb|AAL58123.1|AC092697_11 hypothetical protein [Oryza sativa (ja... 266 1e-70
>ref|NP_176568.1| unknown protein; protein id: At1g63830.1, supported by cDNA:
gi_19424092 [Arabidopsis thaliana]
gi|25404446|pir||D96663 unknown protein, 55304-53614
[imported] - Arabidopsis thaliana
gi|12325014|gb|AAG52456.1|AC010852_13 unknown protein;
55304-53614 [Arabidopsis thaliana]
gi|19424093|gb|AAL87329.1| unknown protein [Arabidopsis
thaliana] gi|21436183|gb|AAM51379.1| unknown protein
[Arabidopsis thaliana]
Length = 232
Score = 282 bits (722), Expect = 2e-75
Identities = 125/155 (80%), Positives = 140/155 (89%)
Frame = +2
Query: 101 ASQEHLEKMQLRQNYRNLWHTDLMRTIQVDTPYCCFALWCAPCASYLLRKRALYNDMSRY 280
ASQ+ L+KM+LRQ+YRNLWH+DLM T+ DTPYCC + C PC SY+LR+RALYNDMSRY
Sbjct: 3 ASQDKLDKMKLRQDYRNLWHSDLMGTVTADTPYCCISCLCGPCVSYMLRRRALYNDMSRY 62
Query: 281 TCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFMLQDEFNIQTTQCDNCIIGF 460
TCCAGYMPCSGRCGESKCP+ CL TEVFLCFGNSVASTRF+LQDEFNIQTTQCDNCIIGF
Sbjct: 63 TCCAGYMPCSGRCGESKCPQLCLATEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGF 122
Query: 461 MFCLQQIACIFSIVALIVGSDEIQQASQLLSCLAD 565
MFCL Q+ACIFSIVA IVGSDE+ +ASQ+LSC AD
Sbjct: 123 MFCLSQVACIFSIVACIVGSDELSEASQILSCCAD 157
>ref|NP_198955.1| putative protein; protein id: At5g41390.1 [Arabidopsis thaliana]
gi|9758048|dbj|BAB08511.1|
gb|AAF07369.1~gene_id:MYC6.10~strong similarity to
unknown protein [Arabidopsis thaliana]
Length = 297
Score = 279 bits (714), Expect = 2e-74
Identities = 126/154 (81%), Positives = 138/154 (88%)
Frame = +2
Query: 104 SQEHLEKMQLRQNYRNLWHTDLMRTIQVDTPYCCFALWCAPCASYLLRKRALYNDMSRYT 283
SQ+ L+KMQLRQ+YRNLWH+DLM T+ DTPYC F+ C PC SYLLRKRALYNDMSRYT
Sbjct: 4 SQDKLDKMQLRQSYRNLWHSDLMGTVSADTPYCFFSCLCGPCVSYLLRKRALYNDMSRYT 63
Query: 284 CCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFMLQDEFNIQTTQCDNCIIGFM 463
CC GYMPCSG+CGESKCP+FCL TEV LCFGNSVASTRFMLQDEFNI TT+CDNCIIGFM
Sbjct: 64 CCGGYMPCSGKCGESKCPQFCLATEVCLCFGNSVASTRFMLQDEFNIHTTKCDNCIIGFM 123
Query: 464 FCLQQIACIFSIVALIVGSDEIQQASQLLSCLAD 565
FCL QIACIFS+VA IVGSDE+ +ASQLLSCLAD
Sbjct: 124 FCLNQIACIFSLVACIVGSDELSEASQLLSCLAD 157
>ref|NP_194078.2| expressed protein; protein id: At4g23470.1, supported by cDNA:
25694., supported by cDNA: gi_17065515, supported by
cDNA: gi_20148522 [Arabidopsis thaliana]
gi|17065516|gb|AAL32912.1| Unknown protein [Arabidopsis
thaliana] gi|20148523|gb|AAM10152.1| unknown protein
[Arabidopsis thaliana]
Length = 255
Score = 271 bits (694), Expect = 3e-72
Identities = 118/153 (77%), Positives = 137/153 (89%)
Frame = +2
Query: 107 QEHLEKMQLRQNYRNLWHTDLMRTIQVDTPYCCFALWCAPCASYLLRKRALYNDMSRYTC 286
++ +EKM+LR+N+RN+WHTDL +IQ DTPYCCFALWCAPCASYLLRKRALY+DMSRY C
Sbjct: 3 KQDMEKMELRKNFRNVWHTDLTHSIQNDTPYCCFALWCAPCASYLLRKRALYDDMSRYVC 62
Query: 287 CAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFMLQDEFNIQTTQCDNCIIGFMF 466
CAGYMPCSGRCGE+KCP+ CL TEVF CF NSVASTRF+LQDEF IQTT+CDNCIIGFM
Sbjct: 63 CAGYMPCSGRCGEAKCPQLCLATEVFCCFANSVASTRFLLQDEFQIQTTKCDNCIIGFMV 122
Query: 467 CLQQIACIFSIVALIVGSDEIQQASQLLSCLAD 565
CL Q+ACIFSIVA IVG DE+ +ASQ+L+C +D
Sbjct: 123 CLSQVACIFSIVACIVGMDELSEASQILTCCSD 155
>gb|AAM63607.1| unknown [Arabidopsis thaliana]
Length = 247
Score = 266 bits (680), Expect = 1e-70
Identities = 116/147 (78%), Positives = 132/147 (88%)
Frame = +2
Query: 125 MQLRQNYRNLWHTDLMRTIQVDTPYCCFALWCAPCASYLLRKRALYNDMSRYTCCAGYMP 304
M+LR+N+RN+WHTDL +IQ DTPYCCFALWCAPCASYLLRKRALY+DMSRY CCAGYMP
Sbjct: 1 MELRKNFRNVWHTDLTHSIQNDTPYCCFALWCAPCASYLLRKRALYDDMSRYVCCAGYMP 60
Query: 305 CSGRCGESKCPEFCLCTEVFLCFGNSVASTRFMLQDEFNIQTTQCDNCIIGFMFCLQQIA 484
CSGRCGE+KCP+ CL TEVF CF NSVASTRF+LQDEF IQTT+CDNCIIGFM CL Q+A
Sbjct: 61 CSGRCGEAKCPQLCLATEVFCCFANSVASTRFLLQDEFQIQTTKCDNCIIGFMVCLSQVA 120
Query: 485 CIFSIVALIVGSDEIQQASQLLSCLAD 565
CIFSIVA IVG DE+ +ASQ+L+C +D
Sbjct: 121 CIFSIVACIVGMDELSEASQILTCCSD 147
>gb|AAL58123.1|AC092697_11 hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 216
Score = 266 bits (680), Expect = 1e-70
Identities = 118/155 (76%), Positives = 133/155 (85%)
Frame = +2
Query: 101 ASQEHLEKMQLRQNYRNLWHTDLMRTIQVDTPYCCFALWCAPCASYLLRKRALYNDMSRY 280
ASQ +L+K QLRQ+YRN+WHTDL I D CC +LWC PC SY+LRKRALYNDMSRY
Sbjct: 3 ASQAYLDKAQLRQSYRNVWHTDLTNAITADFTCCCLSLWCGPCVSYMLRKRALYNDMSRY 62
Query: 281 TCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFMLQDEFNIQTTQCDNCIIGF 460
CCAGYMPCSGRCGES CPE CL TEVF CFGNSVASTRF+LQDEFNIQTTQCDNCIIGF
Sbjct: 63 VCCAGYMPCSGRCGESNCPEVCLATEVFCCFGNSVASTRFLLQDEFNIQTTQCDNCIIGF 122
Query: 461 MFCLQQIACIFSIVALIVGSDEIQQASQLLSCLAD 565
MFCLQQ ACI S+VA IVGS+E+ +ASQL+SC+++
Sbjct: 123 MFCLQQFACICSLVACIVGSEELSEASQLISCISN 157
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 507,074,655
Number of Sequences: 1393205
Number of extensions: 11096463
Number of successful extensions: 34515
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 32869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34460
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
