Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009073A_C01 KMC009073A_c01
(409 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ZP_00006262.1| hypothetical protein [Rhodobacter sphaeroides] 33 0.84
emb|CAC28825.2| related to a-agglutinin core protein AGA1 [Neuro... 32 1.9
sp|P54674|P3K2_DICDI PHOSPHATIDYLINOSITOL 3-KINASE 2 (PI3-KINASE... 32 1.9
ref|NP_701756.1| hypothetical protein [Plasmodium falciparum 3D7... 31 3.2
ref|NP_509455.1| Putative protein, nematode specific [Caenorhabd... 31 4.2
>gb|ZP_00006262.1| hypothetical protein [Rhodobacter sphaeroides]
Length = 342
Score = 33.1 bits (74), Expect = 0.84
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 185 IPMSLQNLP--NPHARPMFQPPSSIMSTSCELLPIQCVPPLLLSEAFTAITKRLATEPGE 358
IP L NLP +P+ P P++ T+ P + PP ++ T LA EP
Sbjct: 254 IPSGLSNLPMLSPYGAPAAAEPAATEPTATS--PSEATPPAPAADTPPETTGPLADEPSA 311
Query: 359 VSSPKE 376
V +P+E
Sbjct: 312 VPAPEE 317
>emb|CAC28825.2| related to a-agglutinin core protein AGA1 [Neurospora crassa]
gi|28922658|gb|EAA31883.1| hypothetical protein
[Neurospora crassa]
Length = 464
Score = 32.0 bits (71), Expect = 1.9
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +1
Query: 187 SNESSKSPKSSCSSHVPTPKFHHVHQL*VVTNTVCTTTTTIRGLYSNYKTTS 342
S+ + +S SS SS VPTP+ Q VT T +TT+T + + TTS
Sbjct: 182 SSSAQQSTTSSSSSSVPTPEPSTTTQAPPVTITTTSTTSTTSTIPTTTSTTS 233
>sp|P54674|P3K2_DICDI PHOSPHATIDYLINOSITOL 3-KINASE 2 (PI3-KINASE) (PTDINS-3-KINASE)
(PI3K) gi|7489855|pir||T18273 1-phosphatidylinositol
3-kinase (EC 2.7.1.137) 2 - slime mold (Dictyostelium
discoideum) gi|733522|gb|AAA85722.1|
phosphatidylinositol-4,5-diphosphate 3-kinase
Length = 1858
Score = 32.0 bits (71), Expect = 1.9
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +1
Query: 178 KFHSNESSKSPKSSCSSHVPTPKFHHVHQL*VVTNTVCTTTTTIRGLYSNYKTTSNGTRR 357
+F++N ++ + S SS + T K + L V +NT TTTTT TT+N +
Sbjct: 257 QFNNNNNNNNSNSGGSSRMITSK-SQIKPLIVTSNTAATTTTT---------TTTNTSAP 306
Query: 358 SFITERVNNLMKD 396
+ T RV + + D
Sbjct: 307 TTPTNRVQSSLDD 319
>ref|NP_701756.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23496928|gb|AAN36480.1|AE014850_45 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 2309
Score = 31.2 bits (69), Expect = 3.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 259 HQL*VVTNTVCTTTTTIRGLYSNYKTTSNGTRRSFIT 369
H++ + NT+ TTTTTI +NY +N R+ +
Sbjct: 401 HKINKMNNTIITTTTTINNNSNNYNNNNNKVNRNLFS 437
>ref|NP_509455.1| Putative protein, nematode specific [Caenorhabditis elegans]
gi|7499371|pir||T16097 hypothetical protein F18E9.3 -
Caenorhabditis elegans gi|868288|gb|AAA68809.1|
Hypothetical protein F18E9.3 [Caenorhabditis elegans]
Length = 346
Score = 30.8 bits (68), Expect = 4.2
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Frame = +1
Query: 211 KSSCSSHVP--------TPKFHHVHQL*VVTNTVCTTTTTIRGLYSNYKTTSNGTRRSFI 366
K++ ++H P TP H + V+T TV TTTTT + + TS TR
Sbjct: 131 KTTTTTHAPLTTKMRESTPATHSTTERAVITTTVPTTTTTEKTKLLSTTPTSTTTRTVQA 190
Query: 367 TERV 378
T R+
Sbjct: 191 TTRI 194
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 355,374,073
Number of Sequences: 1393205
Number of extensions: 7566733
Number of successful extensions: 24056
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 22903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24014
length of database: 448,689,247
effective HSP length: 111
effective length of database: 294,043,492
effective search space used: 7057043808
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
