Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009021A_C01 KMC009021A_c01
(632 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196854.1| putative protein; protein id: At5g13500.1, supp... 263 2e-69
dbj|BAC22247.1| hypothetical protein~similar to Arabidopsis thal... 237 8e-62
ref|NP_680219.1| Expressed protein; protein id: At5g25265.1, sup... 234 7e-61
ref|NP_180098.1| unknown protein; protein id: At2g25260.1 [Arabi... 194 6e-49
gb|AAF01555.1|AC009325_25 unknown protein [Arabidopsis thaliana]... 44 0.001
>ref|NP_196854.1| putative protein; protein id: At5g13500.1, supported by cDNA:
6674., supported by cDNA: gi_19699008 [Arabidopsis
thaliana] gi|9955542|emb|CAC05427.1| putative protein
[Arabidopsis thaliana] gi|19699009|gb|AAL91240.1|
putative protein [Arabidopsis thaliana]
gi|21594054|gb|AAM65972.1| unknown [Arabidopsis
thaliana] gi|23198096|gb|AAN15575.1| putative protein
[Arabidopsis thaliana]
Length = 358
Score = 263 bits (671), Expect = 2e-69
Identities = 119/132 (90%), Positives = 124/132 (93%)
Frame = -2
Query: 631 IAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHGVRHILRKDFMLQPPWDLETHN 452
IAPTWMNVSL MK DPETDKAFGWVLEMY YAIASA+HGVRHILRKDFMLQPPWDL T
Sbjct: 226 IAPTWMNVSLTMKNDPETDKAFGWVLEMYGYAIASAIHGVRHILRKDFMLQPPWDLSTKG 285
Query: 451 KYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHLRGPPPRNLPLPPPGVPESVVTLVKMV 272
K+IIHYTYGCDYN+KGELTYGKIGEWRFDKRSHLRGPPPRN+ LPPPGVPESVVTLVKMV
Sbjct: 286 KFIIHYTYGCDYNMKGELTYGKIGEWRFDKRSHLRGPPPRNMSLPPPGVPESVVTLVKMV 345
Query: 271 NEATANIPHWDT 236
NEATA IP+WDT
Sbjct: 346 NEATATIPNWDT 357
>dbj|BAC22247.1| hypothetical protein~similar to Arabidopsis thaliana chromosome 5,
At5g25265 [Oryza sativa (japonica cultivar-group)]
Length = 364
Score = 237 bits (605), Expect = 8e-62
Identities = 106/132 (80%), Positives = 122/132 (92%)
Frame = -2
Query: 631 IAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHGVRHILRKDFMLQPPWDLETHN 452
IAPTWMN+S+ MK+DPETDKAFGWVLEMYAYA+ASALHGV +IL K+FM+QPPWDLE +
Sbjct: 229 IAPTWMNISIAMKKDPETDKAFGWVLEMYAYAVASALHGVGNILHKEFMIQPPWDLEIGD 288
Query: 451 KYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHLRGPPPRNLPLPPPGVPESVVTLVKMV 272
+IIHYTYGCDY++KG+LTYGKIGEWRFDKRS+ PPPRNLPLPP GVP+SVVTLVKMV
Sbjct: 289 AFIIHYTYGCDYDMKGKLTYGKIGEWRFDKRSYDSKPPPRNLPLPPNGVPQSVVTLVKMV 348
Query: 271 NEATANIPHWDT 236
NEATANIP+WD+
Sbjct: 349 NEATANIPNWDS 360
>ref|NP_680219.1| Expressed protein; protein id: At5g25265.1, supported by cDNA:
gi_17065061 [Arabidopsis thaliana]
gi|17065062|gb|AAL32685.1| Unknown protein [Arabidopsis
thaliana]
Length = 366
Score = 234 bits (597), Expect = 7e-61
Identities = 104/130 (80%), Positives = 119/130 (91%)
Frame = -2
Query: 631 IAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHGVRHILRKDFMLQPPWDLETHN 452
IAPTWMNVSL MK+DPE DKAFGWVLEMYAYA++SALHGV +IL KDFM+QPPWD+E +
Sbjct: 235 IAPTWMNVSLAMKKDPEADKAFGWVLEMYAYAVSSALHGVSNILHKDFMIQPPWDIEVGD 294
Query: 451 KYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHLRGPPPRNLPLPPPGVPESVVTLVKMV 272
KYIIHYTYGCDY++KG+LTYGKIGEWRFDKRS+ PPPRNL +PPPGV +SVVTLVKM+
Sbjct: 295 KYIIHYTYGCDYDMKGKLTYGKIGEWRFDKRSYDSKPPPRNLTMPPPGVSQSVVTLVKMI 354
Query: 271 NEATANIPHW 242
NEATANIP+W
Sbjct: 355 NEATANIPNW 364
>ref|NP_180098.1| unknown protein; protein id: At2g25260.1 [Arabidopsis thaliana]
gi|25371351|pir||C84646 hypothetical protein At2g25260
[imported] - Arabidopsis thaliana
gi|4567251|gb|AAD23665.1| unknown protein [Arabidopsis
thaliana]
Length = 303
Score = 194 bits (494), Expect = 6e-49
Identities = 87/114 (76%), Positives = 99/114 (86%)
Frame = -2
Query: 631 IAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHGVRHILRKDFMLQPPWDLETHN 452
IAPTWMNVSL MK DP+TDKAFGWVLEMYAYA++SALHGV +IL KDFM+QPPWD ET
Sbjct: 169 IAPTWMNVSLAMKNDPQTDKAFGWVLEMYAYAVSSALHGVSNILHKDFMIQPPWDTETKK 228
Query: 451 KYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHLRGPPPRNLPLPPPGVPESVV 290
+IIHYTYGCD+++KG++ GKIGEWRFDKRS+ PPPRNL LPP GVPESVV
Sbjct: 229 TFIIHYTYGCDFDMKGKMMVGKIGEWRFDKRSYGDKPPPRNLTLPPRGVPESVV 282
>gb|AAF01555.1|AC009325_25 unknown protein [Arabidopsis thaliana]
gi|6091716|gb|AAF03428.1|AC010797_4 unknown protein
[Arabidopsis thaliana]
Length = 814
Score = 44.3 bits (103), Expect = 0.001
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = -2
Query: 565 GWVLEMYAYAIASALHGVRHILRKDFMLQPPWDLETHNKYIIHYTYGCDYNLKGELTYGK 386
GW+ EMY Y+ +A +RH + K+ M+ P + E Y + + YG ++ K
Sbjct: 597 GWISEMYGYSFGAAELNLRHSINKEIMIYPGYVPEPGADYRV-FHYGLEF---------K 646
Query: 385 IGEWRFDK 362
+G W FDK
Sbjct: 647 VGNWSFDK 654
Score = 40.8 bits (94), Expect = 0.015
Identities = 27/102 (26%), Positives = 47/102 (45%), Gaps = 9/102 (8%)
Frame = -2
Query: 631 IAPTWMNVSLKMKEDPE------TDKAFG--WVLEMYAYAIASALHGVRHILRKDFMLQP 476
+AP W++ + +++D T +G W+ EMY Y+ +A G++H + D M+ P
Sbjct: 193 LAPLWLSKTEDVRQDTAHWTTNLTGDIYGKGWISEMYGYSFGAAEAGLKHKINDDLMIYP 252
Query: 475 PW-DLETHNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSH 353
+ E ++H YG ++ IG W F K H
Sbjct: 253 GYVPREGVEPVLMH--YGLPFS---------IGNWSFTKLDH 283
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 557,043,690
Number of Sequences: 1393205
Number of extensions: 12964819
Number of successful extensions: 45403
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 39534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45031
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26154777244
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
