Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008837A_C01 KMC008837A_c01
(704 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P49231|PRO1_PHAVU Profilin 1 gi|1076516|pir||S49351 profilin ... 256 2e-67
gb|AAL29690.1| profilin [Lycopersicon esculentum] 255 5e-67
sp|Q9STB6|PRO2_HEVBR Profilin 2 (Pollen allergen Hev b 8.0102) g... 254 6e-67
sp|O82572|PRO1_RICCO Profilin 1 gi|3694872|gb|AAC62482.1| profil... 253 1e-66
emb|CAD10377.1| profilin [Lycopersicon esculentum] 251 5e-66
>sp|P49231|PRO1_PHAVU Profilin 1 gi|1076516|pir||S49351 profilin 1 - kidney bean
gi|556836|emb|CAA57508.1| profilin [Phaseolus vulgaris]
Length = 131
Score = 256 bits (654), Expect = 2e-67
Identities = 120/131 (91%), Positives = 126/131 (95%)
Frame = -3
Query: 699 MSWQAYVDDHLLCDIEGNHLTSAAILGQDGSVWAQSTNFPQFKPEEITGIMNDFAEPGTL 520
MSWQ YVDDHLLC+IEGNHLT AAILGQDGSVWA+S +FPQFKPEEITGIMNDF EPGTL
Sbjct: 1 MSWQTYVDDHLLCEIEGNHLTHAAILGQDGSVWAKSASFPQFKPEEITGIMNDFNEPGTL 60
Query: 519 APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALVIGIYDEPMTPGQCNMVVE 340
APTGLYIGGTKYMVIQGEPG+VIRGKKGPGGVTVKKTN ALVIGIYDEPMTPGQCNM+VE
Sbjct: 61 APTGLYIGGTKYMVIQGEPGSVIRGKKGPGGVTVKKTNLALVIGIYDEPMTPGQCNMIVE 120
Query: 339 RLGDYLVEQGL 307
RLGDYL+EQGL
Sbjct: 121 RLGDYLIEQGL 131
>gb|AAL29690.1| profilin [Lycopersicon esculentum]
Length = 131
Score = 255 bits (651), Expect = 5e-67
Identities = 117/131 (89%), Positives = 126/131 (95%)
Frame = -3
Query: 699 MSWQAYVDDHLLCDIEGNHLTSAAILGQDGSVWAQSTNFPQFKPEEITGIMNDFAEPGTL 520
MSWQ YVDDHL+CDIEGNHLTSAAI+GQDGSVWAQS NFPQFKPEEIT IMNDFAEPGTL
Sbjct: 1 MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSANFPQFKPEEITAIMNDFAEPGTL 60
Query: 519 APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALVIGIYDEPMTPGQCNMVVE 340
APTGL++GGTKYMVIQGE GAVIRGKKG GG+TVKKTNQAL+IGIYDEPMTPGQCNM+VE
Sbjct: 61 APTGLHLGGTKYMVIQGEAGAVIRGKKGAGGITVKKTNQALIIGIYDEPMTPGQCNMIVE 120
Query: 339 RLGDYLVEQGL 307
RLGDY++EQGL
Sbjct: 121 RLGDYIIEQGL 131
>sp|Q9STB6|PRO2_HEVBR Profilin 2 (Pollen allergen Hev b 8.0102)
gi|5689740|emb|CAB51914.1| profilin Hev b 8 [Hevea
brasiliensis]
Length = 131
Score = 254 bits (650), Expect = 6e-67
Identities = 117/130 (90%), Positives = 127/130 (97%)
Frame = -3
Query: 699 MSWQAYVDDHLLCDIEGNHLTSAAILGQDGSVWAQSTNFPQFKPEEITGIMNDFAEPGTL 520
MSWQAYVDDHL+C+IEGNHL++AAI+GQDGSVWAQS NFPQFK EEITGIM+DF EPGTL
Sbjct: 1 MSWQAYVDDHLMCEIEGNHLSAAAIIGQDGSVWAQSANFPQFKSEEITGIMSDFHEPGTL 60
Query: 519 APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALVIGIYDEPMTPGQCNMVVE 340
APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQAL+IGIYDEPMTPGQCNM+VE
Sbjct: 61 APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120
Query: 339 RLGDYLVEQG 310
RLGDYL++QG
Sbjct: 121 RLGDYLIDQG 130
>sp|O82572|PRO1_RICCO Profilin 1 gi|3694872|gb|AAC62482.1| profilin [Ricinus communis]
Length = 131
Score = 253 bits (647), Expect = 1e-66
Identities = 116/131 (88%), Positives = 126/131 (95%)
Frame = -3
Query: 699 MSWQAYVDDHLLCDIEGNHLTSAAILGQDGSVWAQSTNFPQFKPEEITGIMNDFAEPGTL 520
MSWQ YVDDHL+C+IEGNHLTSAAI+GQDGSVWAQS+ FPQFKPEEIT IMNDF EPG+L
Sbjct: 1 MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60
Query: 519 APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALVIGIYDEPMTPGQCNMVVE 340
APTGLY+ GTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQAL+IGIYDEPMTPGQCNM+VE
Sbjct: 61 APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120
Query: 339 RLGDYLVEQGL 307
RLGDYL++QGL
Sbjct: 121 RLGDYLIDQGL 131
>emb|CAD10377.1| profilin [Lycopersicon esculentum]
Length = 131
Score = 251 bits (642), Expect = 5e-66
Identities = 115/131 (87%), Positives = 125/131 (94%)
Frame = -3
Query: 699 MSWQAYVDDHLLCDIEGNHLTSAAILGQDGSVWAQSTNFPQFKPEEITGIMNDFAEPGTL 520
MSWQ YVD+HLLC+ EGNHLTSAAI+GQDG+VWAQS NFPQFKPEEITGIMNDFA PGTL
Sbjct: 1 MSWQTYVDEHLLCENEGNHLTSAAIIGQDGTVWAQSANFPQFKPEEITGIMNDFAVPGTL 60
Query: 519 APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALVIGIYDEPMTPGQCNMVVE 340
APTGLY+GGTKYMVIQGEP AVIRGKKGPGG+T+KKTNQAL+IGIYDEPMTPGQCNM+VE
Sbjct: 61 APTGLYLGGTKYMVIQGEPEAVIRGKKGPGGITIKKTNQALIIGIYDEPMTPGQCNMIVE 120
Query: 339 RLGDYLVEQGL 307
RLGDYL+EQ L
Sbjct: 121 RLGDYLIEQSL 131
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 641,709,140
Number of Sequences: 1393205
Number of extensions: 15058147
Number of successful extensions: 38659
Number of sequences better than 10.0: 152
Number of HSP's better than 10.0 without gapping: 36583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38497
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32091529758
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
