Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008792A_C01 KMC008792A_c01
(582 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187040.1| putative adenylylsulfate kinase; protein id: At... 199 2e-50
gb|AAF17236.1|AF178976_1 adenosine-5'-phosphosulfate kinase [Zea... 198 5e-50
gb|AAM62496.1| putative adenosine phosphosulfate kinase [Arabido... 183 2e-45
ref|NP_179082.1| putative adenosine phosphosulfate kinase; prote... 183 2e-45
ref|NP_195704.1| adenosine-5-phosphosulfate-kinase; protein id: ... 175 4e-43
>ref|NP_187040.1| putative adenylylsulfate kinase; protein id: At3g03900.1
[Arabidopsis thaliana]
gi|6006852|gb|AAF00628.1|AC009540_5 putative
adenylylsulfate kinase [Arabidopsis thaliana]
Length = 208
Score = 199 bits (507), Expect = 2e-50
Identities = 93/120 (77%), Positives = 107/120 (88%)
Frame = -2
Query: 569 NIRRTGEVAKLFADAGLICVASLISPYRRDRDVCRAMLSDANFIEVFMNMPLELCEARDP 390
NIRR GEVAKLFADAGLIC+ASLISPYR+DRD CR M+ +++FIEVFMNM L+LCEARDP
Sbjct: 87 NIRRVGEVAKLFADAGLICIASLISPYRKDRDACREMIQNSSFIEVFMNMSLQLCEARDP 146
Query: 389 KGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQEGGVCPTPNVMAGQVACYLEEKGFLE 210
KGLYKLARAGKIKGFTGIDDPYE PLNCEIE+K++ G CP+P MA +V YLE+KGFL+
Sbjct: 147 KGLYKLARAGKIKGFTGIDDPYESPLNCEIELKEKEGECPSPVAMAEEVISYLEDKGFLQ 206
>gb|AAF17236.1|AF178976_1 adenosine-5'-phosphosulfate kinase [Zea mays]
Length = 288
Score = 198 bits (503), Expect = 5e-50
Identities = 97/119 (81%), Positives = 106/119 (88%)
Frame = -2
Query: 569 NIRRTGEVAKLFADAGLICVASLISPYRRDRDVCRAMLSDANFIEVFMNMPLELCEARDP 390
NIRR VAKLFADAGL+C+ASLISP+RRDR+ CRA+LSD++FIEVF+NM LELCEARDP
Sbjct: 170 NIRRV--VAKLFADAGLVCIASLISPHRRDRESCRALLSDSSFIEVFLNMSLELCEARDP 227
Query: 389 KGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQEGGVCPTPNVMAGQVACYLEEKGFL 213
KGLYKLARAGKIKGFTGIDDPYE PLNCEIEIK+ GVCP P MAGQV YLEEKGFL
Sbjct: 228 KGLYKLARAGKIKGFTGIDDPYEAPLNCEIEIKEVDGVCPPPAEMAGQVVTYLEEKGFL 286
>gb|AAM62496.1| putative adenosine phosphosulfate kinase [Arabidopsis thaliana]
Length = 276
Score = 183 bits (464), Expect = 2e-45
Identities = 86/120 (71%), Positives = 102/120 (84%)
Frame = -2
Query: 569 NIRRTGEVAKLFADAGLICVASLISPYRRDRDVCRAMLSDANFIEVFMNMPLELCEARDP 390
NIRR GEVAKLFADAG+IC+ASLISPYR DRD CR++L + +F+EVFM++PL +CEARDP
Sbjct: 158 NIRRVGEVAKLFADAGIICIASLISPYRTDRDACRSLLPEGDFVEVFMDVPLSVCEARDP 217
Query: 389 KGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQEGGVCPTPNVMAGQVACYLEEKGFLE 210
KGLYKLARAGKIKGFTGIDDPYEPPLNCEI + +EGG P MA +V YL+ KG+L+
Sbjct: 218 KGLYKLARAGKIKGFTGIDDPYEPPLNCEISLGREGGTSPIE--MAEKVVGYLDNKGYLQ 275
>ref|NP_179082.1| putative adenosine phosphosulfate kinase; protein id: At2g14750.1,
supported by cDNA: 14216., supported by cDNA:
gi_15810037, supported by cDNA: gi_450234 [Arabidopsis
thaliana] gi|7387811|sp|Q43295|KAP1_ARATH
Adenylylsulfate kinase 1, chloroplast precursor (APS
kinase) (Adenosine-5'phosphosulfate kinase) (ATP
adenosine-5'-phosphosulfate 3'-phosphotransferase)
gi|1076283|pir||S47640 adenylyl-sulfate kinase (EC
2.7.1.25) precursor - Arabidopsis thaliana
gi|414737|emb|CAA53426.1| APS kinase [Arabidopsis
thaliana] gi|450235|gb|AAC50035.1| APS kinase
[Arabidopsis thaliana] gi|1575322|gb|AAC50034.1| APS
kinase [Arabidopsis thaliana] gi|3252812|gb|AAC24182.1|
putative adenosine phosphosulfate kinase [Arabidopsis
thaliana] gi|15810038|gb|AAL06946.1| At2g14750/F26C24.11
[Arabidopsis thaliana] gi|22135773|gb|AAM91043.1|
At2g14750/F26C24.11 [Arabidopsis thaliana]
Length = 276
Score = 183 bits (464), Expect = 2e-45
Identities = 86/120 (71%), Positives = 102/120 (84%)
Frame = -2
Query: 569 NIRRTGEVAKLFADAGLICVASLISPYRRDRDVCRAMLSDANFIEVFMNMPLELCEARDP 390
NIRR GEVAKLFADAG+IC+ASLISPYR DRD CR++L + +F+EVFM++PL +CEARDP
Sbjct: 158 NIRRVGEVAKLFADAGIICIASLISPYRTDRDACRSLLPEGDFVEVFMDVPLSVCEARDP 217
Query: 389 KGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQEGGVCPTPNVMAGQVACYLEEKGFLE 210
KGLYKLARAGKIKGFTGIDDPYEPPLNCEI + +EGG P MA +V YL+ KG+L+
Sbjct: 218 KGLYKLARAGKIKGFTGIDDPYEPPLNCEISLGREGGTSPIE--MAEKVVGYLDNKGYLQ 275
>ref|NP_195704.1| adenosine-5-phosphosulfate-kinase; protein id: At4g39940.1,
supported by cDNA: gi_18087562, supported by cDNA:
gi_20453396, supported by cDNA: gi_2829132 [Arabidopsis
thaliana] gi|7387808|sp|O49196|KAP2_ARATH
Adenylylsulfate kinase 2, chloroplast precursor (APS
kinase) (Adenosine-5'phosphosulfate kinase) (ATP
adenosine-5'-phosphosulfate 3'-phosphotransferase)
gi|7434263|pir||T06100 adenylyl-sulfate kinase (EC
2.7.1.25) [validated] - Arabidopsis thaliana
gi|2829133|gb|AAC39520.1|
adenosine-5'-phosphosulfate-kinase [Arabidopsis
thaliana] gi|4490745|emb|CAB38907.1|
adenosine-5'-phosphosulfate-kinase [Arabidopsis
thaliana] gi|7271049|emb|CAB80657.1|
adenosine-5'-phosphosulfate-kinase [Arabidopsis
thaliana] gi|18087563|gb|AAL58913.1|AF462823_1
AT4g39940/T5J17_110 [Arabidopsis thaliana]
gi|20453397|gb|AAM19937.1| AT4g39940/T5J17_110
[Arabidopsis thaliana]
Length = 293
Score = 175 bits (443), Expect = 4e-43
Identities = 82/121 (67%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
Frame = -2
Query: 569 NIRRTGEVAKLFADAGLICVASLISPYRRDRDVCRAMLSDANFIEVFMNMPLELCEARDP 390
NIRR GEVAKLFAD G+IC+ASLISPYRRDRD CR++L D +F+EVFM++PL +CE+RDP
Sbjct: 172 NIRRIGEVAKLFADVGVICIASLISPYRRDRDACRSLLPDGDFVEVFMDVPLHVCESRDP 231
Query: 389 KGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQEG-GVCPTPNVMAGQVACYLEEKGFL 213
KGLYKLARAGKIKGFTGIDDPYE P+NCE+ +K G +P MA + YL+ KG+L
Sbjct: 232 KGLYKLARAGKIKGFTGIDDPYEAPVNCEVVLKHTGDDESCSPRQMAENIISYLQNKGYL 291
Query: 212 E 210
E
Sbjct: 292 E 292
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 507,418,105
Number of Sequences: 1393205
Number of extensions: 10910868
Number of successful extensions: 25602
Number of sequences better than 10.0: 160
Number of HSP's better than 10.0 without gapping: 24909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25538
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
